Pelodiscus sinensis (Chinese soft-shelled turtle): 102455677
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Entry
102455677 CDS
T02980
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pss01002
]
102455677 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pss04121
]
102455677 (USP42)
Enzymes [BR:
pss01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
102455677 (USP42)
Peptidases and inhibitors [BR:
pss01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
102455677 (USP42)
Ubiquitin system [BR:
pss04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
102455677 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
102455677
NCBI-ProteinID:
XP_075755604
Ensembl:
ENSPSIG00000013406
LinkDB
All DBs
Position
16:complement(23232128..23269791)
Genome browser
AA seq
1320 aa
AA seq
DB search
MTIVDKVSESSNSAACQKQPGSSTVPSSGDMDSASANWGAVSSLEAPKHKITLGPVPGAA
VYSSSSVPDKSKPSAQKDQSFSDGIAPPQKILFPAEKICLKWQQTHRVGAGLQNLGNTCF
LNSALQCLTYTPPLANYMLSHEHSKTCHEHGFCMMCTMQSHITQVLSNSGNVIKPTAVIG
DLRRIAKHFRFGNQEDAHEFLHYTVDAMQKACLNGSNKLDRHTQATTLIYQIFGGYLRSR
VKCMNCKGVSDTFDPCLDITLEIKAAQNLNKALEQFVKPEQLDGENAYKCSKCKKMVPAS
KRLTIHRSSNVLTLSLKRFSNFSGGKITKDVKYPEYLDIRPYMSQPNGDPIIYVLYAVLV
HTGINCHAGHYYCYIKASNGHWYQMNDSIVSNSDIKSVLNQQAYVLFYIRSNDTKNGEHT
HSIHTPGQSSPRPVISQQVVNSRQGASGFIGPQLPPHMIKNSNHLNGTGSLKETPSSSVA
SASNVTLNRPASAPPSTSIQNWTINRSTTPDPSKKQKITISIHNNKLPTRQTLSQSSLHN
SLENLNKPVASSTITNSSAAKSTSNAPTVSVAMKVSKQTAPSESCSKPLLNGNSKLNSST
LVPYGAESSEESDEESKGLVKEIGHSKSFNGILIGNVVSTLQNSCSSCQDAKEAVSQHEL
PKNVTVNGAISIDNDPEINGLKFDESTCQVKPVKSTEVSFSKANGLHGKIIPTVLPPVPE
DRMLESFRYKQLKSLSEEISATGLENTSENDGHVETSVSGNSPVSCEKSSKVPANLSCNV
QNSFTESDLETISTKEEIAESIVSKTENAHFDISGQCNTKKISMGVDDEFSKQCDTKDYT
DKIRGPQEVKMTLKESPLHIRGSAETAEKLGQSPFIKSDNECSSIKLTTLIIIDKCQETK
ESGNNYTDVPPTNDTSTKLDNILESNYSKENDGLSGNEKCQENKDKKKFKSHSPMKKRIC
SPKKIDKGHYRAKRQRSESVEQEKQTRNKPDAKKRHSYNKESTKQGWYKQEHSSGNKHKV
MHRERDNPDNDRSLGKYTNYRSRSRGKTDHEKNRYCHSKTEGSWSRERYCQDLPRRWDKC
RYYNDYPPYAARGSRERKFIHGDRDYDKSSQSYNSRSYRDDYYTRRWNHEPVAKEKHFSS
SKIDYHWSAPSQHSEKYSHEKCAPMSEENNSSFETSCHKSEYLNDRKRKCASLESSDSNM
EKKRRRSLQSEPMEEQRVKKHKKSKKKKKSKDKHREKDDRLHQDSDISGAGSDSDIHKHK
KKKKKKKKHTKKSEDFIATDLPFHKNHGYSVIKSSDGNFAYTDETRWKVQSVLMEAISTI
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagtatctgagtcttcaaactctgcagcttgtcagaagcagcct
ggtagctccacggtaccttcttctggagatatggactcggcctctgcaaattggggtgct
gtatcatctttggaagctccaaagcacaagatcactttgggaccagtacctggtgctgcg
gtttattctagttcatctgtacctgataaatcaaaaccttcagctcagaaagatcaatct
tttagtgatggaattgctccaccacagaaaattctttttccagcagagaagatttgtctg
aaatggcagcaaactcatagagttggagctggactccaaaatcttggcaatacatgtttc
ctcaactctgctctgcagtgtttgacttatacaccccctcttgccaactacatgctttct
catgaacactccaaaacatgtcatgaacatggattctgcatgatgtgtacaatgcaatct
cacattacccaggtactctctaactctggcaatgtcatcaaacctacggctgtcatcggt
gatcttagacgcatagcaaaacatttccggtttggaaatcaggaagatgctcatgaattt
ctacactacactgttgatgctatgcagaaagcatgtttgaatggaagcaacaaattggac
agacatacccaggctactacactcatctatcaaatatttggagggtacttaagatccaga
gtaaagtgtatgaactgcaaaggagtctcggataccttcgatccatgccttgatattaca
ttggaaataaaggcagctcagaatttaaacaaagctctggaacagtttgtgaagcctgaa
caactagatggtgaaaatgcctataaatgtagcaagtgcaagaagatggttcctgcttca
aagaggcttacaatacatcggtcttctaatgttcttacattgtctctgaaacggttttca
aattttagtggcggaaaaattaccaaggatgtgaaatatcctgagtatctggatattcga
ccatatatgtctcaaccaaatggagacccaattatttatgttctatatgcagtcctggtg
catactggtattaactgtcatgcaggacactactactgctatataaaggccagtaatggg
cattggtaccagatgaatgattctattgtatccaacagtgacatcaaatctgtccttaat
cagcaagcttatgtgctcttctatatcaggtccaatgatacgaaaaatggagaacacacc
cattccattcatacaccaggacagtcttctccccgtccagttatcagtcaacaggtggtt
aatagcaggcagggagcatcaggatttattggaccacaacttcctcctcacatgattaag
aattccaatcatttaaatggaactggatcactaaaagaaactccaagcagttctgtggca
agtgctagcaatgttaccctaaacagaccagcatcagctccaccttcaacttctattcaa
aactggacaattaacagatctactactcctgacccctcaaaaaaacagaaaatcactatc
agtattcacaataacaaattgcctactcgccaaactctctctcaatccagccttcataat
tctttggagaatctcaacaagcctgttgcttcatccacaattacaaattcctctgcagca
aaatctacctcaaatgcacctacagtgtcagttgctatgaaagtatctaagcaaacagct
cctagcgaatcttgttctaagccattattgaatggcaattctaaactaaactctagtaca
ttggtcccttacggtgcagaatcttcagaagaatctgatgaggagtcgaagggattagtt
aaggagattggccactcaaaatcttttaatggaattttgattggaaatgtagttagtaca
ttacagaactcctgttcttcctgtcaagatgctaaagaggctgtatcccagcatgaactg
ccaaaaaatgttaccgttaatggtgctatcagtatagataatgatcctgaaataaatgga
ttgaaatttgacgaatctacttgccaagtcaagcctgttaaatctacagaagtttcattt
tctaaagcgaatggattgcatggaaaaataatacctacagttttgccaccagttcctgag
gatagaatgttagagtctttccggtataagcagttgaaaagcttgtcagaagaaataagt
gcaactggacttgaaaacacttctgagaatgatggtcatgtagaaacttcagtcagtggc
aacagtcctgtttcctgtgagaagtctagtaaagttcccgctaacctttcctgcaatgtc
cagaattcctttactgaatcagatcttgagactatttctaccaaagaagaaattgctgaa
agtattgtatcaaaaactgagaatgcacattttgatatcagtggacagtgtaacactaag
aaaatatccatgggagttgatgatgaattctctaaacaatgtgataccaaggattataca
gataagataagaggaccacaagaagtaaaaatgactttgaaggaaagtcctctgcatatc
agaggttctgctgagactgcagagaaattggggcaaagccccttcataaagtccgacaat
gaatgtagttctataaaacttacaactctaattattatagataaatgccaagaaacaaag
gagagtggtaataattatacagatgtaccacctactaatgacacttctacaaagttggat
aacattttagagagtaattattctaaagaaaacgatggactgagtggtaatgaaaaatgt
caagaaaataaggataagaaaaaatttaagtctcattctccaatgaagaaaagaatttgc
tcccccaaaaaaattgacaaagggcactaccgtgctaaaaggcagcgttctgaaagcgta
gagcaggagaagcaaaccagaaacaaaccagatgccaaaaaaaggcattcctacaacaaa
gagagtacaaagcagggttggtataaacaggagcactccagtggaaataagcacaaagtt
atgcatagagaaagagacaaccctgataatgacagaagtttaggaaaatataccaattac
agatctcgaagtagaggaaaaactgatcatgagaagaatagatattgccattctaaaaca
gaaggatcttggagtagggaaagatattgccaagatttaccaaggagatgggataagtgc
agatattacaatgattatcctccttatgcagcaagaggtagcagagagagaaaattcatt
catggggacagagactatgataaatcaagtcagagttacaacagtaggtcatatagggat
gattattacacaagaagatggaatcatgaaccagtagctaaagagaaacatttcagtagc
tccaaaatagattatcattggtcagctccctctcagcactctgaaaaatattcccatgaa
aaatgtgcacctatgtctgaagaaaacaattcaagttttgaaacctcttgccacaaatct
gaatatctaaacgacagaaaaagaaaatgtgcgagtctagaaagtagtgacagtaatatg
gaaaagaaacgcagaagaagtttgcagagtgagccaatggaagaacaaagagtgaaaaaa
cacaaaaagtcaaagaaaaaaaagaaatccaaagataaacaccgagagaaagatgatcga
ctgcaccaggattcagacatctctggggctggctctgattctgacatccacaaacataag
aaaaaaaagaagaaaaagaagaaacatacaaagaaatctgaggactttattgctacagac
ctaccttttcataagaaccatggatactcagtcattaaatcttcagatggcaactttgca
tacacagatgaaaccagatggaaggttcaaagtgtgttaatggaagccatctctacaatt
taa
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