Pelodiscus sinensis (Chinese soft-shelled turtle): 102455714
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Entry
102455714 CDS
T02980
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102455714 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102455714 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pss04812
]
102455714 (VIM)
04147 Exosome [BR:
pss04147
]
102455714 (VIM)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
102455714 (VIM)
Cytoskeleton proteins [BR:
pss04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
102455714 (VIM)
Exosome [BR:
pss04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102455714 (VIM)
Exosomal proteins of other cancer cells
102455714 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
GAS
TolA_bind_tri
HMMR_N
DUF7491
DUF4200
TPR_MLP1_2
BLOC1_2
LAMB4
YwqH-like
DUF4515
DUF1759
MRPL52
Motif
Other DBs
NCBI-GeneID:
102455714
NCBI-ProteinID:
XP_006119611
Ensembl:
ENSPSIG00000016677
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
APLRLRSSLPPSRLLHDTVDFSLADAINTEFKANRTNEKVELQELNDRFANYIDKVRFLE
QQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNGKARVEVERDNLADDILRL
REKLQDEMIQREEAENTLQSFRQDVDNASLARLDLERKVESLQEEIVFLKKLHDEEIREL
QAQIQEQHIQIDVDVAKPDLTAALRDVRQQYESVASKNLQEAEEWYKSKFADLSEAATRN
NDALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREMEDNFAVEAANYQDTITRL
QEEIQNMKEEMARHLHEYQELLNVKMALDIEIATYRKLLEGEESRITMPIQTFSSLNLRE
TNIDSHPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
gcgcccctgcgcctgcggagcagcctgcccccctcgcggctcctgcacgacaccgtggac
ttctcgctggccgatgccatcaacacggagttcaaggccaaccgcaccaacgagaaggtg
gagctgcaggagctgaacgaccgcttcgccaactacatcgacaaggtgcgcttcctcgag
cagcagaacaagatcctgctggccgagctggagcagctgaagggcaagggcacctcccgc
ctgggggacctctacgaggaggagatgcgggagctccgccggcaggtggaccagctcacc
aacggcaaagccagggtggaggtggagagggacaacctggccgacgatatcctcaggctc
cgggagaagttgcaagatgagatgattcagcgagaagaagctgaaaacactctgcaatct
ttcagacaggatgttgacaatgcctctctggcacgtcttgatctcgagcgcaaagtagag
tccttgcaagaagagattgtcttcttgaagaagcttcatgatgaggaaatccgggaactg
caggcccagattcaggagcaacacatccaaattgatgtggacgttgctaaaccagatctc
actgctgccttgcgtgatgtccgtcagcagtatgaaagtgttgcttctaagaatcttcag
gaagctgaagaatggtacaagtccaagttcgcagatctctctgaagctgctactaggaac
aatgatgccctacgtcaggccaaacaggaggctaatgagtaccgcagacaaatacagtcc
ctcacctgtgaagttgatgcacttaaaggaagtaatgagtccctggagcgccagatgcgt
gaaatggaagacaactttgctgttgaagctgctaactaccaagacactattacccgtctg
caggaggaaatccaaaacatgaaggaagaaatggctcgccatcttcatgagtaccaagaa
ctgctgaatgtgaagatggctcttgatattgagattgctacctatagaaaattgttggag
ggagaggagagcagaattaccatgcctattcaaactttctcttccctgaacctgagagaa
accaacattgattctcaccctatggttgatacccactcaaagaggacactcctaatcaag
actgttgaaactagagatggacaggttatcaatgaaacttcccagcatcacgatgatctg
gagtga
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