Pelodiscus sinensis (Chinese soft-shelled turtle): 102456079
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Entry
102456079 CDS
T02980
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102456079 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pss03400
]
102456079 (RAD54L)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
102456079 (RAD54L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
102456079
NCBI-ProteinID:
XP_075792024
Ensembl:
ENSPSIG00000003258
LinkDB
All DBs
Position
9:3106484..3135906
Genome browser
AA seq
744 aa
AA seq
DB search
MRRSLAPSQLAKRKPGGDGSEDDEDWHPEATPKKRKPGSENQSWECYRSPFRKPLAQLTN
RPHCLDSSKHEAFIRSILSKPFKVPIPNYQGSLGSRALGLKRTGVRNALHDPFEEGALVL
YEPPPLSAHDQLKIDKDKVPVHVVVDPVLSRVLRPHQREGVKFLWECVTSRRIPGSHGCI
MADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAMVVSPSSLVKNWYNEVGKWLGGRIHP
LAIDGGSKDEIDRKLAGFMNQRGLRVPSPILIISYETFRLHAEVLRKGSVGLVICDEGHR
LKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFEIP
ILKGRDADASEGERHKGEERLKELISVVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ
AELYKHFLKQAKPAEELKEGKISVSSLSSITSLKKLCNHPALIYEKCVEEEEGFAGALDL
FPAGYSPKSLEPQLSGKMLVLDYILAVTRSTSNDKVVLVSNYTQTLDLFEKLCRTRRYLY
VRLDGTMSIKKRAKIVERFNSLSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND
EQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGE
LKELFTWNETTASDTHDKFKCRRCVNGHQVKPPPEGSDCTSDLSQWNHSADKRGLQDSVL
KTAWDAAVTFTFHHHSHEEQRGIP
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagcctggcccccagccagctggccaagaggaagccggggggcgacggctcg
gaggacgatgaggactggcaccccgaggcgactccgaagaagcggaaacctggcagtgag
aaccagagctgggaatgttacagatcacctttccggaaacctttggcccagttgaccaat
cgaccacactgcctggatagcagcaaacatgaggcatttatccgcagcattttgtcaaag
cccttcaaagtacccattccaaattatcaagggtcgctgggctcgagggccctgggcctc
aaacggacaggagtcaggaatgcgctccatgatccttttgaagaaggggctcttgttctt
tatgagcccccgccgctgagtgcgcacgaccagctgaaaatagacaaggacaaagtgcct
gtccatgttgtggtggatcctgttctcagccgcgttttacggccccatcagagagaaggg
gtgaagtttctctgggaatgcgtcacgagccggcggatccccgggagccacggctgcatc
atggctgacgagatggggctgggcaagaccctccagtgcatcactctgatgtggacgttg
ctgcggcagagccctgactgcaagcctgaaatcgacaaggccatggtggtctctccgtcc
agcctggtgaaaaactggtacaacgaagtcggcaagtggctgggaggaaggatccatccg
ctggccatcgacggaggctccaaagatgagatcgaccgtaaactagccggctttatgaac
cagcgcggcttgcgagtgccttcccctatcctgatcatttcctacgagacgttccgcctt
cacgccgaggtcctgcggaaggggagcgtcgggctggtcatctgtgacgagggccacagg
ctaaagaactcggaaaatcaaacctaccaggctctgaacagcttgaacacccctcggcga
gttctcatctccgggaccccgatccagaacgacctgctggaatacttcagcctggtgcac
ttcgttaactcgggcatcctcgggacagcgcaggagtttaagaagcattttgaaatcccg
atcctaaaaggcagggatgcagatgcaagtgaaggggagagacacaaaggggaggagcga
cttaaagagctgatcagtgttgtgaacagatgtttgatcaggagaacttcagatatcctg
tccaaatacctacctgtgaaaatcgagcaggtggtttgctgcaggctgacacctctgcag
gctgagctgtacaagcacttcctgaagcaagcgaagccggccgaagagctgaaggagggg
aagatcagcgtgtcgtctctctcctccatcacgtccctgaagaagctctgtaaccaccct
gccctgatctacgagaagtgtgtggaggaggaggaagggtttgccggagccttggacttg
ttccctgctggctacagtcccaagtccctggagccccagctgtcagggaagatgctggtg
ttggattatatcctggctgtgacaaggagcaccagcaatgacaaggtcgtcctggtctcc
aattacacccaaacgctggacctctttgagaagctctgcaggacccgcaggtatttatat
gtccgactggatggcaccatgtccattaaaaagagagcgaagatcgtcgagcggtttaac
agcctgtcgagccccgagtttatcttcatgctgagcagcaaagcaggcggctgcggcttg
aacttgatcggggcgaaccgactcgtcatgttcgacccggactggaacccggccaacgac
gagcaagccatggcgcgcgtctggcgagacggccagaagaagacctgctatatctacagg
ctgctctcgacggggacgattgaggagaagattttccagcgtcagacccacaagaaggcg
ctgagcagctgcgtggtagacgaggagcaggatgtggagagacacttctcgctaggggag
ctgaaggagctgttcacgtggaacgagaccaccgccagtgacacccatgacaagtttaag
tgtcgccgctgtgtgaatggccaccaggtaaaacctccccctgaaggctcggactgcacc
tctgatctctcccagtggaaccacagtgcggacaagcgtgggctccaggactccgtgctg
aaaaccgcatgggatgctgctgtcaccttcacattccatcaccactcccacgaggagcag
cgagggattccctga
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