Pelodiscus sinensis (Chinese soft-shelled turtle): 102456166
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Entry
102456166 CDS
T02980
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04142
Lysosome biogenesis
pss04144
Endocytosis
pss05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102456166 (CLTCL1)
04142 Lysosome biogenesis
102456166 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102456166 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102456166 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pss04147
]
102456166 (CLTCL1)
Membrane trafficking [BR:
pss04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102456166 (CLTCL1)
Exosome [BR:
pss04147
]
Exosomal proteins
Proteins found in most exosomes
102456166 (CLTCL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Gp18_dom_I
capSnatchArena
NEW1_HB
Motif
Other DBs
NCBI-GeneID:
102456166
NCBI-ProteinID:
XP_075754352
Ensembl:
ENSPSIG00000005084
LinkDB
All DBs
Position
15:complement(16136497..16192812)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVFHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNTKPSTLFCFAVRSPAGGKLHIIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGAKHGVSYLITKYGYIHMYDLESGVCIYMNRISA
DTIFVTAPHEPSSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYGEAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSVECLRAMLSSNIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVIGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
NSCVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENSPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFVSGPNNAHIQQ
VGDRCYEEGMYDAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFFS
KVDQLPLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAASLFACYDLLHPDVVLELAWRHNIVDFAMPYFIQVMREYLTKVDGLFNKVDKL
DASESLRKEEEQVAEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccattcgcttccaggagcacttccagctccaaaacctgggaatt
aatccagctaacattggattcagcactctaacaatggaatctgataaattcatctgcatc
agagagaaagtaggagaacaagcacaggtagtcatcatagatatgagtgatccgactaca
ccaatcagacgtccaatttctgcagaaagtgccatcatgaatccagcttctaaagtcatt
gctctgaaagcggggaagacgctacagatctttaacattgagatgaaaagtaaaatgaaa
gcccatactatggcagaggaagtgatcttctggaaatggatatcggtaaacacagttgcc
ttggtgacagagacagcagtcttccattggagcatggagggagaatctcagccccaaaag
atgtttgataggcatgctagtcttgcaggctgccaaatcatcaattacaggacagatgaa
caccaaaagtggctactcctgataggcatttcagcccagcaaaatcgtgtcgttggtgca
atgcagttgtattcagttgataggaaggtttctcaacctatagagggccatgcagcagcc
tttgcagaattcaaaatagaaggaaacaccaagccttccacactcttctgttttgcggta
cggagccctgcaggaggcaagctccatataattgaagtaggtcaacctgctgctggaaac
cagccctttgtaaagaaagctgttgatgtgtttttccctcctgaggctcagacggacttc
cctgtggcaatgcagattggagccaagcatggcgttagctacctgatcactaagtatgga
tacattcacatgtatgacttggaatctggagtgtgtatttacatgaaccgtattagtgct
gacacaatctttgtaactgctcctcatgaaccttcctctggcattattggtgtgaataaa
aaaggacaggtattgtcagtttgtgttgaagaagataacattgtgaattatgctactaat
gttctccagaatccagacctgggtctgcgtatggctattcgcagtaacttggctggggca
gaggagttgtttgctagaaagttcaatacactctttgcacaaggaagttatggagaagct
gctaaagtagcagcatctgcaccaaagggaatccttcgtaccagtgatactatcagaaag
ttccagagtgtgccagcacagcctgggcaggcctctcctttactgcagtactttggtatc
ttgcttgaccaaggacaacttaacaaatttgaatcattagaactctgccgtcctgtcttg
caacaaggacgcaagcagctcctggaaaaatggctgaaggaagataagctggaatgctct
gaggagctaggcgatctggtgaagacagctgacccaaccctggcactcagtgtttacctt
cgtgctaatgtgccaaacaaagtcattcagtgctttgcagaaactggtcagtttcagaaa
atagtgctttatgcgaaaaaggttggctacacaccagactggatcttcttgttgagaagt
gtgatgagagtcagcccagaacaaggccttcagttctctcagatgctggtgcaggatgaa
gagccactggctaatattaaccagatcgtagatgtattcatggagaacagtctcattcag
caatgcacttccttcttgttggatgctttgaagaataatcgccctgctgaaggacacctt
cagacacgtctgctggaaatgaatctaattcatgccccccaggttgcagatgccatcctt
ggaaatcaaatgtttacacactatgatcgtgctcacatcgctcagttatgtgaaaaggca
ggcttgctacaaagagcattggaacactacactgatctctatgatataaagcgtgctgtt
gttcacactcatctcttgaatcctgagtggcttgtaaactactttgggtctctgtcggtt
gaagactctgtggaatgtctgcgtgcaatgctgtcttccaacattcgacaaaacctacag
ctctgtgtgcaagtagcttctaaataccatgagcagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagttatgaaggactattttatttcctcggttctattgtgaac
ttcagccaggatccagatgtccactttaaatatatccaggcagcctgcaagactggtcag
attaaggaggttgaaaggatttgccgtgagagtaactgctataacccagaacgggtgaag
aattttctgaaggaggccaagctcacagaccagcttcctttgatcattgtttgtgacagg
tttgactttgttcatgacctggttctctatttgtaccgcaataacctccagaagtacatt
gagatctacgttcagaaggtgaatccaagccgtataccagcagtaattggagggcttctt
gatgtagattgttctgaagatgtaattaagaacttgatcatggtggttagaggccagttc
tcaactgacgaattggtagctgaagtggaaaaaagaaataggcttaagttgctgctacca
tggctggaatctagaattcatgaaggttgtgaagaacctgccactcacaatgctttggct
aaaatctacattgacagtaataataatcctgagcggtttctccgggagaacccatactac
aacagctgtgttgtaggcaaatactgtgaaaaaagggaccctcatttggcctgtgttgct
tatgagaggggacaatgtgacctcgagctcatcaaggtttgcaatgagaactccttgttc
aagagtgaagctcgttacttggtacgcaggaaggacccagaactttgggcaaatgtcctt
gaggaaaacagtccattcagacgacagctcattgatcaggttgtccagacagccttatca
gagacacaggatcctgaagaagtgtctgttactgtgaaagctttcatgactgctgatcta
cccaatgaactaattgaacttcttgagaagattgtcttggacaactctgtgttcagtgaa
cataggaatctccagaatctactaatcttgactgctattaaagctgaccgcactcgtgta
atggagtatatcaatcgtctggataactatgatgcccctgatattgcaaatatagctatc
agcaatgagctatatgaagaagcctttgctatcttcaggaaatttgatgttaatacttct
gcaatacaggttctgatagagcacataggcaacctggaccgtgcctatgaatttgcagag
agatgtaacgaaccagctgtatggagtcagctggccagagcacagctccagaaggacttg
gtgaaggaagccatcgactcttatatcaaggcagatgatccctctgcttacatggaagtt
gtccaagctgctagtaaaaacaataactgggaggatctggttaaattcttgcaaatggcc
agaaaaaaggccagagagtcctacgtagagactgaacttatctttgctttggcaaaaacc
aaccgcctttcagagctggaagagtttgtcagtggccctaacaatgctcacattcagcag
gttggagatcgctgctatgaggaaggaatgtatgatgcagcaaagctactctacaacaat
gtatctaactttgcccgcctggcatctaccttggtgcatcttggagagtaccaggcagca
gtagacagtggccgcaaagccaacagtaccaggacttggaaggaggtgtgctttgcctgt
gtggatggaaaggagtttcgcctggcgcagatatgtggtttgcacatagtaatccatgca
gatgaacttgaagagctgattagctattatcaggatcgtggctactttgaagaattgatt
gccctcttggaagctgctttgggcctggaacgtgcgcacatgggaatgttcacagaactt
gccatcttgtactccaaattcaaacctcagaagatgagggaacacttggagctcttctgg
tccagagtcaacattccaaaggtgctcagagctgcagaacaagctcacctctggggagaa
ctggtcttcctttatgataagtatgaagagtatgacaatgcaataattacaatgatgaac
catcccactgatgcttggaaagaagggcaattcaaagacataattgccaaggtggctaat
gtagagctgtattacaaagccctgcagttctacttggactataaacctctactgatcaat
gatcttctattagtattatctccacgactggatcataccaggacagtcagctttttctca
aaggttgatcaactgcctctagtgaagccttacctgcgttcagtccagaaccacaacaac
aaaggagtcaatgaggctctgaacaatctcctgacagaggaggaggattatcagggtttg
agagcatccattgatgcatatgataattttgataacatcacactagctcagcgcttggag
aaacatgaattgattgaatttagacgtatcgcagcctacttatacaaaggtaataatcgt
tggaaacagagcgtggagctgtgcaagaaggatcgtctctacaaggatgccatgcagtat
gctgcagaatccaaagatgcagagctggcagagaaactgctccagtggtttctggaggaa
ggaaaacaggagtgctttgcagcatctctctttgcatgctatgacttgttgcacccagat
gtggttcttgagctggcatggaggcataacattgtggactttgcaatgccttatttcatc
caagtgatgagggaataccttaccaaagttgatgggctgtttaataaggtggataaactt
gatgcttctgaaagcctaaggaaagaagaggaacaagtagctgaacccactccaatagta
tttggccagcagctaatgttaacagcaggtcccagcgcagtacctccccaggcaaacttc
ccatatggatacactgctccaggattcacccagccgcctgtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
