Pelodiscus sinensis (Chinese soft-shelled turtle): 102456398
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Entry
102456398 CDS
T02980
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04120
Ubiquitin mediated proteolysis
pss04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102456398 (UBE4B)
04120 Ubiquitin mediated proteolysis
102456398 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pss04121
]
102456398 (UBE4B)
Enzymes [BR:
pss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102456398 (UBE4B)
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
U-box type E3
102456398 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
102456398
NCBI-ProteinID:
XP_006127129
Ensembl:
ENSPSIG00000012006
LinkDB
All DBs
Position
Unknown
AA seq
1347 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGPSSQPTTPLTSPQRENPPGPPVVVPAPGPSHNFGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPPSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
AWFSEQFKQNPKEVFSDFKDLIGQILMEVLMMSTQSRDENPFASLTATSQPIAAAARSPD
RNLILNTGSNPGTSPIFCNVGSFGSSSLSSLYGTSPASSNNFSSHVPMTGSSVTPPASSL
ATTSLPSISVSPYLTTASPSGVQPSSPRYRPYTVTHPLGFSASHIPRSLNISIPASSSPP
VMATSPQAVPVSSSRQRATTVGPPLFTALSGTLSRRSSFLSRMPSSIYDNPFSLLFLGVS
DVSGDSSDEENEDDDFSCVQFGSSVGGSTGASACDSCSDHFSIETCKETEMLNYLIECFD
RVGIEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCR
NLPFGFIQELVRTTHQDEEMFKQIFIPILQGLALASKECSLDSDNFKYPLMALGELCEIK
FGKTHPICNLVVSLPLWLPKPISPGAGRELQRLSYLGAFFSLSVFAEDDTKVVEKYFSGP
AITLENTRVVSQSLQHYLESARQELFKTLHSILLNGETREAALSYMAAVVDANMKKAQMQ
TDDRMVSTDGFMLNFLWVLQQLSTKIKLETVDPTYIFHPRCRITVPMDETRVKATMEDVT
GWMAELPRDQSPCSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKN
NESQWKESPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGMVIQLLL
RILDPAYPNIILPLNPDVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQDIAMFL
VVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYT
DVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTT
FLLDESLESLKRIHEVQEEMKNKEQWDLLPRDQQQARQSQLAQDERVSRSYLALATETVD
MFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQL
TDIYLQLDCARFAKAIADDQRSYSKDLFEEVISKMRKAGIKSTIAIEKFKLLAEKVEEIV
AKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTL
TENMLEPVPELKEQIQAWMRDKQNTDH
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgatgagatccgtcgaaggcgccttgctcggcttgcaggtgga
ccatcttcccagcccaccaccccacttacctctccacaaagagagaacccacctggacca
cctgtagtagtgccagccccaggtccatcccacaattttggcctgaatgtccatagcatg
accccagctacctctccaattggcgcatcaggagtagcccaccgaagccagagcagtgaa
ggagtgagttcgctcagcagttccccatctaacagccttgaaacacaatctcaatctctt
tcccggtcccagagcatggatattgatagtgtctcctgtgagaaaagtatgtcccaagtg
gacgtagattcaggaatagaaaacatggaggtcgatgagaatgatcgcagagagaagagg
agcctgtctgataaggagcctccctcaggatctgaagtgtccgaggagcaggccttacag
ctggtctgtaagatcttcagagtatcgtggaaggatcgagacagagacgtcatcttcctc
gcttggttttctgagcaatttaagcagaacccaaaagaagtattctcagattttaaggac
ttgattggccagattttaatggaagttctgatgatgtccactcagtcaagggatgaaaac
ccatttgccagtctgacagccacatctcagccaattgcagcagctgcccggtcacctgac
agaaatctgattctaaacactggctccaacccaggaacgagtcctatattctgtaacgtg
ggctcctttggttccagttccctgtccagtctctatgggactagtccagcttctagtaac
aatttctcaagtcatgtgccaatgactggttcatctgttaccccaccagccagttcactt
gccaccacatctttgccttctatttctgtcagcccatacctcacaacagcaagtccttct
ggagtccagccctcctctccgaggtaccgcccatatactgtcacccaccctttgggcttt
tcagcttctcatatcccacgctccttgaatatctccatcccagctagctcaagtcctcca
gtcatggctaccagtcctcaagctgtgccagtcagctcgtccagacagagggccacaaca
gtgggtccacctttgtttactgctttgtccggtaccttgagtaggcgttcctctttccta
agcaggatgccttctagtatatacgacaaccctttctccctcctcttccttggcgtttct
gatgtgtctggggacagtagtgatgaagaaaacgaagatgatgatttttcttgtgtccaa
tttgggtccagtgtgggtggctctactggagcaagtgcttgtgattcctgcagcgaccat
ttcagcattgaaacttgtaaggagacagagatgctgaactacctcattgagtgttttgac
agagttgggatagaggagagaaaagcaccaaagatgtgtagccagccagcagttagccag
ttactgagcaacatccggtcacagtgcatttcgcatgctgctttggtgctacagggatct
ttaacacaaccaaggtctttgcagcagcagtctctgttggtaccatacatgctgtgtagg
aatcttccatttggctttatccaagaattggtgagaacaactcaccaagatgaagagatg
tttaaacagatctttatccctatcttacaaggcctggctcttgcttcaaaagagtgctcc
cttgatagcgacaatttcaaatacccccttatggcattaggtgaactgtgtgaaatcaag
tttgggaaaacgcaccctatatgcaatttggtcgtatctttgcccttgtggttgcctaaa
cctataagcccaggtgcagggcgagagttgcaaagactctcttaccttggagctttcttc
agtctctctgtctttgctgaagatgatactaaagtggttgaaaaatatttctcagggcct
gccattactcttgaaaacacccgcgttgttagccagtcattgcagcattacttggaatct
gcaaggcaagagctgtttaagactctacacagtattttgctgaatggtgaaactcgagag
gcagctctcagttacatggcagctgttgttgatgccaacatgaagaaagcacagatgcag
actgatgatcgaatggtgtctacggacggttttatgctcaacttcctctgggtgctgcag
cagctaagcacaaagatcaagctagaaacggttgatcccacctatatattccatcccaga
tgtcgaatcactgtcccaatggatgagacaagagtgaaagcaacaatggaggatgtaaca
ggctggatggctgaacttcccagggatcagtctccttgttctgaaccaaaattcccaacg
gaatgcttcttcctaaccctgcatgcccatcacctctccatcctgccaagctgccgccgc
tacatccgtagactgcgggccatcagagagcttaacaggactgtggaagatctgaaaaac
aatgaaagtcaatggaaggagtctcctctagcaaccagacatagagaaatgctaaaacgc
tgtaaaacacaacttaagaaactggtacgatgcaaggcttgcgcagatgctggcttgcta
gatgaaaactttctgaggaggtgtctgaatttttatggcatggtgattcagctgttgctt
cgaatcctcgaccctgcctaccccaacataatactgcctttaaatcctgatgtcccgaag
gtatttgcagcactgcctgagttttatgtggaagatgttgctgaatttttattttttatt
gtacaatactctccccaggtgctttatgagccatgcactcaggacattgcgatgttcctt
gttgtgatgctgtgcaaccagaattacatccgaaacccatatctggtagcaaagctggtg
gaggtgatgttcatgacaaacccagctgttcagccacggactcagaagttctttgaaatg
attgagaatcatcctctctccactaaattgttagtcccctcactgatgaagttttataca
gatgttgagcacactggagctaccagtgagttctatgacaaatttacaatccgctaccac
atcagcaccattttcaaaagcctttggcagaatattgctcatcatggcactttcatggaa
gagttcaactctggaaagcaatttgttcgctatatcaacatgctgataaatgacacaact
tttttgctggatgagagtctggaatccctaaaacgtatccatgaagttcaagaagagatg
aagaacaaagaacagtgggacctgttgcctagggaccagcaacaggctcggcagtctcag
cttgctcaggatgagcgtgtgtctcgctcgtatcttgccctggcaacagaaactgttgat
atgtttcatatccttaccaaacaggttcagaagcctttcctcagacctgaacttggacca
cgactggctgctatgctgaactttaaccttcaacaattgtgtggtcccaagtgccgtgac
ctgaaagtagaaaaccctgaaaaatatggatttgaaccaaagaagctattggaccaactg
actgatatttacctgcagctagattgtgctcgttttgctaaagcaattgctgacgaccag
aggtcctacagcaaagacctatttgaggaggttatttcaaagatgaggaaggctggaatc
aagtccacaatagcaatagaaaaattcaagctgctggcagagaaagtggaggaaattgtt
gccaagaatgcccgtgcagaaatcgattatagcgatgctccagatgaattcagagatcca
ctcatggacactcttatgacggacccagtgaggctaccatctggaacaatcatggacaga
tcaatcatcctgcgacacctgctaaactcctccactgaccccttcaatcggcagacactg
acagaaaatatgctagaaccagtgccagaactgaaagagcaaattcaagcctggatgaga
gacaagcagaacactgaccattaa
DBGET
integrated database retrieval system
