Pelodiscus sinensis (Chinese soft-shelled turtle): 102456463
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Entry
102456463 CDS
T02980
Symbol
SOX5
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pss03000
]
102456463 (SOX5)
Transcription factors [BR:
pss03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102456463 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102456463
NCBI-ProteinID:
XP_014428106
Ensembl:
ENSPSIG00000002789
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MEFGAEETLVLLPGRFAALCGKQELTVRPTEMSSKRPASPYGEADGEVAMVTSRQKVEEE
ESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQESCGHRTPTSQHNTMEIDGNKVMSSFA
PHNSSTSPLKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEET
PSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDE
QKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPV
FPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLY
AAQLAAMQVSPGGKIPGIPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPK
TSEGKSPTSPTSPHMPTLRINSGASSLKSSVPATLASPSARVNTIDILSSITSSGYLNDH
DAVTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKDKTTLESLTQQLAVKQN
EDGKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRK
ILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTC
LVDGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAXPPLPSEHSSVSS
SPEPGMPVIQSTYGIKGEEPHIKEEIQANDINGEIYDEYDEEEDDPDVDYGSDSENHIAG
QAN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggagtttggagctgaggaaactttggttttgttgccaggacggttcgcagcactttgt
ggcaagcaagagctaacagtgcgaccgacagagatgtcttccaagcgaccagcctctccg
tatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaagaagag
gagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaacaagcct
cactctgaggaatttcagccagtttctctgttgacgcaagagagttgtggccataggact
cccacttctcagcacaacacaatggaaattgatggcaataaagtgatgtcttcatttgcc
ccgcacaactcatctacctcacccttgaaggcagaagaaggtgggcgtcagagtggagag
tcattgtccagcacagccctgggaactcctgaaaggcgtaaaggcagcctagcagatgtt
gtagacaccttaaagcaaagaaaaatggaagagctcataaaaaatgagcctgaagaaact
cccagtattgaaaagctactatcaaaggactggaaagacaagcttcttgccatgggatca
gggaactttggagaaataaaagggactccagaaagcctagctgagaaggaaaggcagctc
atgggcatgatcaatcagctgaccagtttgcgggagcagctgctagcagctcatgatgaa
cagaagaaactggctgcatcacaaattgagaaacaacgccagcaaatggagctggctaag
cagcaacaggaacagattgcaagacaacagcagcagctcctgcagcagcaacacaaaatt
aaccttcttcagcaacagatccaggtacaaggtcagctgcctccattgatgattccagtg
ttccctccagaccaacgaaccctagcagcagctgctcagcaaggattcctccttcctcct
ggtttcagctacaaggcaggatgcagtgacccttaccctgttcagctgatcccaactacc
atggcagctgctgccgcagcaacaccaggcttaggcccactccaactgcagcagttgtat
gctgcccagcttgctgcaatgcaagtatctccaggtggcaagatacctggcataccccaa
ggcaaccttggtgctgctgtatcccctaccagcatccacacagacaagagcacaaacagt
cctccacccaaaagcaaggatgaagtggcccagccactgaacctctcagctaaacccaag
acatctgagggaaaatctccaacatcacccacctctcctcatatgccaactctgagaata
aacagtggggccagttcactcaaatcctctgtgccggcaacattagctagtccttcagcc
agagttaacacaatagatattctttcttctatcacgtcgtcaggttatttaaatgaccac
gatgctgttaccaaggcaatccaggaggcccgccagatgaaggagcaacttcggagggaa
caacaggtgcttgatgggaaggtggctgttgtgaatagtctgggtctcaataactgcagg
acagaaaaggacaaaacaacactggagagcctgactcaacagctggcagtaaaacagaat
gaagatgggaagtttagccatgctatgatggatttcaacatgagtggtgattctgatgga
agtgcaggtgtgtcagaatctagaatttatcgggaatccagagggcgtggaagtaatgaa
ccccatatcaagcgtccaatgaatgccttcatggtgtgggctaaagatgagcgaaggaag
atccttcaagccttccctgacatgcacaactccaacattagcaagatactgggatctcgc
tggaaagctatgacaaacctagagaagcagccatactacgaggagcaggcccgactcagc
aagcaacatctggagaaatacccagactataaatacaagcccaggccgaagcgcacctgt
cttgtggatggcaaaaaactgcggatcggcgaatacaaagcaatcatgcgcaacaggcga
caagagatgaggcaatattttaatgttgggcaacaagcacagattcctatcgctaccgcc
ggtgtagtctacccaggagccnnccctcctctgccatcagagcactcgagtgtgtccagc
agcccagagcccggcatgccagtcatccagagcacttacggcatcaaaggtgaggagcct
catatcaaagaggagatacaggccaatgacatcaatggagaaatctacgatgagtacgac
gaggaagaggatgaccctgatgtggactatggcagtgacagtgaaaatcacattgcaggg
caagccaactga
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