Pelodiscus sinensis (Chinese soft-shelled turtle): 102456667
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Entry
102456667 CDS
T02980
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss02010
ABC transporters
pss04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102456667 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102456667 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pss02000
]
102456667 (ABCA1)
Transporters [BR:
pss02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102456667 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
102456667
NCBI-ProteinID:
XP_025038947
Ensembl:
ENSPSIG00000011985
LinkDB
All DBs
Position
Unknown
AA seq
2217 aa
AA seq
DB search
MAFGTQLGLLLWKNFTYRRRQTLQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGVVGNFNRSIISRLFSDAKRLLLYGQKDS
SIKDAQKFLGKLQQLGDAGSGLKLRDFLVDNETFSEFLHQNVSVPLFAVDEILNAEVNLQ
QVVLSGYRMQLKDLCNASKLSDFVTIHNPIVAVVSEAFLCTMAQETLHAAEQSFRANLDL
LKPVMKEITSSGAMETLVESLGKLMKELASMKSWSDMRQEVMFLTNVNATSSSTQIYQAV
SRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEEDAANFYDNSTSKCLGITLPLCRQ
VNRTFQELGVFRDLGGMWQEISPKIWTFMESSAEMDLIRSLLKSKDLWDAHLSGSNWTVQ
DVSLFLAKSPEDVQSVNGSAYTWKDAFNETDQAVLTISRFMEVSLRAGGRATEVRLINRS
MELLDERKFWAGIVFPDIGPSSAGLPPHIRYKLRMDIDNVERTNKIKDGYWDPGPRADPF
EDMRYVWGGFAYLQDVVEQAIIRALTGAEKKTGVYVQQMPYPCYVDDVFLRVMSRSMPLF
MTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLMSAGLLVLI
LKVGNLLPYSDPSVVFVFLSVFAVVTISQCFLISTMFSRANLATACGGIIYFTLYLPYVL
CVAWQDYVGFSLKMFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPLEEDGFNLTT
SAIMMLFDTFLYGVMTWYFESVFPGQYGIPRPWYFPFTKSYWCGEESEERRHTRPEHKGP
SENCMEEEPSHLSLGVSIQNLVKIYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTM
SILTGLFPPTSGTAFILGRDIRSELSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGL
SEKKVKEEMQQMVTDVGLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVD
PYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGT
GYYLTLVKKDVDSSLSSCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSVIS
NLIMKHVPEARLVEDIGHELTYVLPYEAAREGAFVELFHEIDDRLSDLGISSYGISETTL
EEIFLKVAEDNGVDAETSDGTLPARRNRRVFGDRQSCLHPFTEDDAFDPNDSDIDPESRE
TDLLSGMDGKGSYQMKGWKLTQQQFVALLWKRLLVAKRSRKGFFAQIVLPAVFVCIALMF
SLIVPPFGKYPSLELQPWMYDEQYTFISNDAPDDAGTQKLLNSLLNEPGFGTRCMEGHSI
PDTPCLVGEDRWTTAPVPDTVLDIFLNGNWTMENPSPACECSNEKIKKMLPVCPPGAGGL
PPPQREQRTGDTLQNLTGRNISDYLVKTYAQIIGKSLRNKIWVNEFRYGGFSVGASSSLL
LPPSDEVSDAIKQMKKILELAKGSSGDQFLNSLESFMKGMDTKNNVKVWFNNKGWHAIGA
FLNVMNNAILRASLPDGENSSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFA
MSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLANFVWDMCNYVVPATLVIIIFICF
QQKSYVSSSNLPALALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVA
TFVLELFTNNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPL
SWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIKPRPVSAKLPPVNDEDEDVTRERQRIIS
GGGQSDILEIKELTKIYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTD
VTGGEAFLKGNSILSNIQGVHQNMGYCPQFDAINELLTGREHLEFYALLRGVPEREVCKV
GDWGIRKLGLVKYGEKYAGNYSGGNRRKLSTAIALIGGPPVLFLDEPTTGMDPKARRFLW
NCALSIIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVR
IAGANPNLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPSSPSSLARIFSILSQNKKRLHIE
DYSVSQTTLDQVFVNFAKDQSDDDHTKDMSLHKNQTVVDIAILTSFLRDEKAKESCV
NT seq
6654 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgggacgcagctgggattgctgctgtggaaaaacttcacgtaccggagaaga
cagacgctgcagctgttgattgaggtggcctggcctctcttcatcttctttatattgatc
tcggtgcgcctgtcgtatccgccctacgaacaacacgaatgtcactttccaaacaaggcc
atgccttcggcgggaaccttgccctgggtccaagggatcatctgtaatgccaacaacccc
tgcttccgctacccaacacccggggaatcccccggggtcgtcggaaacttcaacaggtcc
atcatttcccgcttgttctcggatgccaagaggttgctcttgtacggccagaaggacagc
agcataaaggacgcacagaaattcctgggaaaactgcagcagctcggggacgccggctca
ggtttgaaacttcgggatttcctggttgacaacgagaccttctcagagtttctccaccaa
aatgtttccgtgccattgtttgctgtggatgagatactgaatgcagaggtcaacctccag
caggtcgtcctgtccggctaccgcatgcagctgaaagatctgtgcaatgcatcgaagctg
tcggactttgtcacaatccacaacccgatcgtggcggtggtcagcgaagccttcctctgc
accatggctcaggagacgctccacgctgcagagcagtccttccgggctaatctagacctt
ttgaagcccgtaatgaaagaaatcacctcctcaggagccatggagaccttagtggagagc
ctggggaagctcatgaaagagctggccagcatgaaaagctggagcgacatgcggcaggag
gtgatgtttctgaccaatgtgaatgccacaagctcctctacccagatctaccaagcggta
tcgcgcattgtgtgtggccatccggaaggaggagggctgaaaatcaaatctctcaactgg
tatgaggacaacaactacaaagccctgttcggaggcaacagcaccgaggaggatgcagct
aatttctatgacaattctacaagtaagtgtttgggaataacccttcccctttgccggcag
gtgaacaggactttccaggagctgggtgtgttccgggatctaggagggatgtggcaggag
atcagcccgaagatttggacgttcatggaaagcagtgcagagatggacctgatccggtcg
ttgctgaagagcaaagacctctgggacgctcacttgagcggctccaactggacggttcaa
gatgtgtccctgttcctggcaaagtccccggaggacgttcaatccgtgaacggctccgcg
tacacctggaaggatgccttcaatgagaccgaccaagctgtgctaaccatctcccgcttc
atggaggtgagcctacgcgcaggcggccgggccacagaggtgcggctcatcaacaggtcc
atggagctgctggacgagaggaagttctgggccggcatcgtcttccctgacatcggcccg
agcagcgcggggctgccgcctcacatcaggtacaagctgcggatggacatcgacaacgtg
gaaaggacaaacaagattaaggacgggtactgggacccggggcctcgtgccgaccccttt
gaagacatgcggtacgtctggggcggcttcgcgtacctgcaggacgtggtggagcaggca
atcatcagggcgctgacgggcgcggagaagaagaccggcgtctacgtgcagcagatgccc
tacccctgctacgtggatgacgtattcctgcgggtcatgagccgctccatgcccctcttc
atgactctggcgtggatctactcggtggcggtgatcatcaagggcatcgtgtacgagaag
gaagcccggctgaaggagaccatgcgcatcatgggcctggacaacggcatcctctggttc
agctggttcatcagcagcctcatccccctcctcatgagcgctgggcttctggtgctgatc
ctgaaggtggggaacctgctgccctacagcgaccccagcgtggtgtttgtcttcctctct
gtcttcgccgtggtgaccatctcccagtgcttcctcatcagcaccatgttctccagggcc
aacctggcgacagcctgtgggggcatcatttacttcaccctctacctgccctacgtgctg
tgcgtcgcctggcaggactacgtgggcttctcgctcaaaatgttcgcgagcctgctgtcc
ccggtcgcctttgggtttggctgcgagtactttgccttgtttgaggagcaggggatcggc
gtgcagtgggacaacctcttcgaaagccccctggaagaagatggctttaatctgaccacg
tcggccatcatgatgctgttcgataccttcctctacggggtgatgacctggtactttgag
tctgtcttcccaggccagtatggaattcccaggccctggtacttccccttcacgaagtcc
tattggtgcggggaggagtctgaggagaggaggcacactcgcccggagcacaaagggccc
tcggagaactgcatggaggaggaaccctcgcaccttagcctgggggtctccattcagaac
ctggtgaagatttatcgtgatggcaagaaggtggctgtggacgggctgacactgaatttc
tatgaggggcagatcacctcctttctgggacacaatggagctgggaagaccaccactatg
tccatcttaacgggcttatttcctccgacctcgggcacggccttcatcctgggcagagat
atccgctccgagctcagcaccatccggcagaacttgggcgtctgtccccagcacaatgtc
ctctttgacatgctgactgtggaagaacacatctggttctacgctcgcctgaaagggctg
tcagaaaaaaaggtgaaagaggagatgcagcagatggtgacggatgttggcctgcctcac
aaactcaaagcgagaaccagcaaactctcgggtggcatgcagaggaagctgtcggtggcc
ttggccttcgtggggggatcaaaggtggtcattctggacgagccaacagcaggggtggat
ccttactctcgccgagggatctgggagctgcttctgaagtatcgccaaggccgcaccatc
attctgtccacgcaccacatggacgaggccgacatcctgggggacaggatcgccatcatc
tctcacggcaagctgtgctgcgttggctcttccctcttcctgaagaaccagctgggaaca
ggctattacctgaccctggtcaagaaggacgtggactcgtcgctgagctcctgccggaac
agcagcagcacggtgtcgtacctgaaaaaggacgacagtgtctcccagagcagttcagat
gcgggacttggcagtgaccatgaaagtgacaccctgacgatagacgtctctgttatctcc
aacctcattatgaagcacgttcctgaggcgaggctggtagaggacattggccatgagcta
acctacgtcttgccgtacgaagctgccagagaaggcgcgtttgtggagctgttccatgaa
atcgatgaccgtctctccgacctgggcatttccagttacggcatctcggagacgacgctg
gaggagatctttctcaaagtggctgaagataatggggtggatgcagagacctcagatggc
accttacctgcaagaaggaacaggcgtgtttttggagaccgacagagctgcctgcatcca
ttcactgaagacgatgcttttgaccccaatgattctgacatagacccagaatccagagag
acagacctgctgagtgggatggatgggaaaggctcctaccagatgaagggctggaagctc
acccagcagcagttcgtagctctgctgtggaagaggctgcttgttgccaaacgtagcagg
aagggtttctttgcccagatcgtgctgccagccgtgtttgtgtgcattgctctcatgttc
agcctgattgtgcccccctttgggaaataccccagcctggaactgcagccctggatgtac
gatgagcagtacacttttatcagcaatgacgcaccggacgatgctggcacccagaagctc
ctgaacagtcttctcaatgagcccggctttgggacccgctgcatggaaggacactccatt
ccagacaccccttgcctggtcggagaggatcggtggaccactgcccctgtccctgacacg
gtcctggacatcttcctcaatggcaactggaccatggagaacccctccccggcctgcgaa
tgcagcaatgagaagatcaagaaaatgctgcctgtgtgccctccgggggcaggggggctt
cctcctccgcagagagaacagagaacgggggacacgctgcagaacctgacgggccggaac
atctccgactatctggtgaagacctacgcgcagatcatcgggaaaagtttaaggaacaag
atctgggtgaatgagttcaggtatggtggcttttcagtgggcgccagcagctccctcctc
cttccgcccagcgatgaagtcagcgatgccatcaagcaaatgaaaaaaatcttggagcta
gccaaggggagctccggagaccagtttcttaacagcctggaaagcttcatgaaagggatg
gacacgaaaaacaacgtgaaggtgtggttcaataacaaaggctggcatgccattggcgcc
ttcctgaacgtgatgaacaatgccatcctccgggccagccttccggacggcgagaattcc
agcgcctacgggatcaccgcgttcaatcacccgctcaacctcaccaagcagcagctctcc
gaggttgccttgatgaccacgtcggtggacgtcttagtctccatctgtgtgatcttcgcc
atgtccttcgtcccagccagctttgtggtcttcttgatccaggagcgggtcagcaaggcc
aagcacctacagttcatcagcggtgtgaagcctgtgatctactggctggctaactttgtc
tgggacatgtgcaactacgtcgttccagccaccttggtcatcatcatcttcatctgcttc
cagcagaagtcctatgtgtcctcttccaacctgcctgcgctggccctccttctcctcctc
tacgggtggtccataacaccgctcatgtacccagcttcctttgtgttcaagatccccagc
acggcctacgtggtgctgaccagcgtcaacctcttcattggcatcaacggcagtgtggcc
actttcgttctcgagctcttcaccaacaacaagctgaacaacatcaacgacatcctaaag
tcggtgttcctcatcttcccccacttctgcctggggcggggactgatcgacatggtgaag
aatcaggcaatggccgacgctttggaaaggtttggtgagaaccgttttgtgtcccctctc
tcctgggacctggtgggacggaacctctttgccatggctgtggaaggcgtcgtcttcttc
ctgatcacagtgctcatccagtacaggttcttcatcaaaccgaggcccgtcagtgccaaa
ctgcctcctgtgaatgatgaggacgaggacgtgaccagggagaggcagaggataattagc
ggcggcgggcagagcgacatcctagaaatcaaagagctgacaaagatttacagaatgaag
aggaaaccagctgttgaccggatctgtgttggaatccctcccggggagtgctttggactc
ctgggagtgaatggtgctggcaagtcatcaactttcaagatgctaactggagacaccgac
gtgaccggaggagaagcttttctaaagggcaacagtatcttgtctaacatccaaggagtc
catcagaacatgggctattgccctcagtttgatgccattaatgagctgctgaccgggagg
gagcatctggagttctacgcacttttacgaggtgttccggagagagaagtctgcaaggtt
ggcgactgggggattcggaaactaggacttgtgaaatacggagaaaaatatgctggaaac
tacagtggaggaaacagacgcaagctctccactgctattgccttgattgggggccctcca
gtgctgttcttagatgagccaaccacgggaatggatcccaaagcccgccgcttcttgtgg
aactgtgctctgagcatcatcaaggaggggagatcggtagtgcttacatctcacagcatg
gaagaatgtgaagccctgtgtactcgaatggcaatcatggtcaatgggaggttcaggtgt
cttggcagcgtccagcatctgaagaacaggtttggagatggctatacgatagtggtgcga
atagcgggcgcaaaccccaacctgaagcccgtgcaggaattctttgggcttgcctttcct
ggcagcgtcctgaaggagaagcatcggaacatgcttcagtaccagctcccatcctcgcca
tcctcactggctaggatatttagcatcctctcccagaacaaaaaaagactccacatagaa
gactactccgtttctcaaactacacttgaccaagtatttgtaaactttgccaaggaccaa
agtgacgatgaccacacgaaggacatgtcattgcacaaaaaccagactgttgtggacatt
gccatccttacttcttttctgcgagacgagaaggcaaaagaaagttgtgtgtga
DBGET
integrated database retrieval system
