Pelodiscus sinensis (Chinese soft-shelled turtle): 102457010
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Entry
102457010 CDS
T02980
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pss03400
]
102457010 (PARPBP)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102457010 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
102457010 (PARPBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARI_N
UvrD_C
Motif
Other DBs
NCBI-GeneID:
102457010
NCBI-ProteinID:
XP_006138095
Ensembl:
ENSPSIG00000013381
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MMPRDGTIWQGAPCGLLTPPRTVSVFSHVPFPSPSQSWISRNMAVFQQKILNMIKCFRRQ
WCLFSDSERTTVCGADYMMMALQLSMAEVNKQLHGDFTVSLSDIMVTWKYLLHDKLGLIC
ENMEAPENYDDIKKAYDTFLKSSNMLDLIDICQKCSTLASETEEMCPIQLLKFISGSSEE
NDSSLSIPSTPIKRSQDNVKLQLIMKKFVYAYLTLLVNSNNDLALAHILNIPDRGLGREA
FTDLKHAAQKRQMPIFLMATSFIRTIELGGKGYAPSPFDPLRTHVKGLSDFVNFIDKLEE
IVGEVLDPRIAGGRILSTIKMHLIKGRNSGDPFCQAAEEVLQDLDLRIKNIINSQHEAMT
ASTTGISPARPKLHAINHGTAYCGRETVKALLVLLDEEAANLPTKNKAELLYGDENVTPF
GITSVLTLFRSPAQSNGSSPKPLRQRIKPSVCERQIKLKQPLIRSQFACTYKDDMMTEKK
AQHFFSRSQIPTCIHPAPKQMLALCSEPKTFADGVNSPLKRPAVGSSFGNVHQNRSKNEK
VKRCQPRNKSSRRKYMDLNSENVISNNDSEPPQYTNIKRPKISNIQQEKLDIKLHGAGKS
NKATAKNKLIAGQTKLTDFFRL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaagggacggcactatatggcaaggagccccctgtggcctcctcacccctcct
aggactgtgtcagtttttagtcatgtcccgttcccgtctccttcccagagctggatttcc
aggaatatggctgtctttcagcaaaagatcttaaatatgatcaagtgttttagaagacag
tggtgcttgttttctgattcagaaaggactactgtttgtggtgcagactacatgatgatg
gctttacagttatcaatggctgaagtcaataaacagcttcatggagattttacagtatct
cttagtgatataatggtaacttggaaatacttgctacatgacaaactgggattgatatgt
gagaatatggaagcacctgaaaattacgacgatatcaaaaaagcttatgataccttcttg
aagagcagtaatatgttagatttaatagatatatgtcagaaatgttctacattagcatct
gaaactgaagagatgtgtcctattcaactgttaaaatttatctctggttcatcagaagag
aatgattctagtctttccataccctcaacaccaattaaacgcagccaggataatgtgaag
ttgcagttgatcatgaagaagtttgtttatgcatatttaaccctgttggtgaattctaac
aatgatctggccctggctcatattttaaatattcctgatagaggacttggaagggaagcc
ttcactgatctaaagcatgctgcgcagaagagacaaatgcctatttttctgatggcaaca
tcttttatccggacgatagaacttggaggaaaaggttatgcaccttcaccatttgatcct
ttaagaacccatgtaaaagggctttcagacttcgttaattttattgacaagcttgaagaa
atagttggcgaagtcctggatccacgaattgcaggggggcgaattctatcaacaatcaag
atgcacttgataaaaggacgaaacagtggggatccattttgtcaagcagcagaggaagtt
ttacaagatttggatttgaggattaaaaatattatcaattctcaacatgaagctatgact
gctagtaccactggaatcagtccagctcggccaaaattacatgccataaaccatggcact
gcctactgtggcagagaaactgtaaaggctttactagttcttctggatgaagaagctgcc
aatcttcctaccaaaaacaaagcagaactactatatggtgatgaaaatgtaactccattt
ggaatcacctctgtcttaacactctttagatctccagcacaatccaatgggtcttctcca
aaacctctcagacaacgtattaaaccatctgtatgtgaaagacaaattaagttgaagcaa
cccttaatcaggtcccagtttgcttgtacctacaaagatgacatgatgactgagaagaag
gctcagcacttcttcagtaggagccaaatcccgacttgcatacatcctgcaccaaaacaa
atgcttgctctctgttctgaacctaaaacttttgcagatggggtaaattcacctcttaaa
agaccagcagttggatccagttttggaaatgttcatcagaatagaagtaaaaatgaaaaa
gtgaaaagatgccagccaagaaacaagagctcaaggaggaaatatatggatttgaatagt
gagaatgtcatcagcaataatgacagtgaacctcctcagtatacaaatattaagagaccc
aagatatcaaacatacaacaggagaaattggacatcaaactacatggagcaggaaaaagc
aacaaggctacagccaagaataaattgattgctggtcagacgaagttaactgactttttt
agactatga
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