Pelodiscus sinensis (Chinese soft-shelled turtle): 102457088
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Entry
102457088 CDS
T02980
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pss03400
]
102457088 (SMC5)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
102457088 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
Rab11-FIP3
BLOC1_2
AAA_29
ATG16
AAA_25
Motif
Other DBs
NCBI-GeneID:
102457088
NCBI-ProteinID:
XP_075787816
Ensembl:
ENSPSIG00000009487
LinkDB
All DBs
Position
6:32824995..32908745
Genome browser
AA seq
1082 aa
AA seq
DB search
MAAPGKRKLGAVTGGPSGSGAGCSKRGSGAARPEGSGLGQPPSPFVEGSVVRVTMENFLT
YDNCEVSPGPHLNMIVGANGTGKSSIVCAICLGLAGKPSFIGRADKVGLYVKRGCSKGMV
EIELFKIPSNLVITREIQVANNASTWFINKKPSTLKTVEEQIAALNVQVGNLCQFLPQDK
VGEFAKLSKTELLEATEKSVGPPEMYQFHCELKTFREREKELENSLQEKTNFLEKMKQRN
ERYKQDVERYYERKRHLDLIEMLERKRPWVEYENVRQQHEEVKQSRDRAKEELKKLQQAK
SPMTQQIQEVEKQWKNLDLKIKEKAAEIKDTSQRCKQKQDAVEKKDKLIEEIQQALRMKK
DEEMDRRKRIHITRKMIEDWQNELNSTENSENLQPQIDYINNELRQLQEEKANIDGEMTD
LRRERENLEREKKSVTDRIVQFNNMMNLKEDKLRGRYRDTYHALLWLRENKDQFKRSVCE
PMMLAINMKDHRHAKYVENHISANDMRAFVFESQEDMEIFLREVRDHQKLKVNAVCAPNE
SCAENRPSRSVEELHQYGFFSYLRELFDAPHPVMSYLCSQYRVHEVPVGTEKTRSMIERV
IQETKFKQIYTAEERYSVKVSSYTNQTISSNTSLRPAQFLTVTVDADERKQLENQLMEIN
RNLQLRDSQLRTLFERQKCLERKDNELRQQKKEHLERKNKRKQLESKISMKHDSLKQMEQ
DTINLEEESQQTNARIKEINIQKAKFVTELMQLIKNCITLNILKVDLVLESTTVTSKKNR
LESDYKAATVQLRALEQQVSDLGERKRVLLERCKGLMKKARQACNLTPDQEIPKDFQMAF
QDLPNTLDEIDALLNEEKSRASCFTGLNASVVEEYNKRAQEIQQVTEELEEKKSELESYR
QNISQVKERWLTPLKQLVEQINEKFSSFFSSMQCAGEVDLHTENEEEYDKYGIRIRVKFR
SNTQLHELTPHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFEMVV
KTACKESTSQYFFITPKLLQNLTYVEKMTVLFVYNGPFMLEPTKWNLKAFRKRRRQIEQM
DQ
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgggcaaacggaaactcggggccgtcactggcgggccgagcgggagcggc
gccgggtgcagtaagcgcggctcgggggctgccaggccagaggggagcggcctggggcag
ccgccgtcgcccttcgtggagggctctgtagtcagggtcaccatggagaacttcctaaca
tatgataattgtgaagtgtctccagggccccatttgaacatgatagtaggagccaatgga
acaggaaagtcaagcattgtgtgtgccatctgtctgggattggctggaaaaccttctttc
atagggcgtgcagacaaggtcggtctgtatgtgaagcgagggtgttctaaaggcatggtt
gaaattgaactatttaagattcctagtaatctcgtcatcactcgtgagattcaagtagca
aacaatgcatcaacatggtttatcaataaaaaaccttcaaccctgaaaacagtggaggag
cagattgcagccttaaatgttcaagtgggcaatctgtgccagtttcttccacaggacaaa
gttggggaatttgcaaagctgtccaagactgagcttcttgaagccacagaaaaatcagtt
ggcccaccagaaatgtatcaatttcactgtgaactaaaaaccttcagagagagagagaaa
gaacttgagaattcattgcaagagaaaaccaatttcttggagaaaatgaagcaaaggaac
gaacggtataagcaagatgtggagcgatactatgaacgcaagcgtcatctagatttaata
gagatgcttgagagaaaaagaccgtgggtggaatatgaaaatgttcgccaacagcatgag
gaggtgaaacaaagccgtgatcgtgcaaaggaagaattgaaaaaactacaacaagcaaag
tctccaatgacacaacaaatccaagaagtagaaaagcaatggaaaaatttggatttaaaa
atcaaagagaaggcagctgaaatcaaagatacttctcaaaggtgtaaacaaaaacaagat
gctgttgaaaagaaagacaaactaattgaagaaattcagcaagcattgagaatgaaaaaa
gatgaagaaatggatcgacgaaaaagaatacacatcactcgtaagatgatagaggactgg
cagaatgagcttaacagtacagaaaactctgagaatcttcagccgcaaattgattatatt
aacaacgagctgagacagttgcaagaagaaaaggcaaatattgatggtgaaatgactgat
ctgcgaagagagagagagaacctagagagagaaaagaaaagcgtaactgatcgcattgta
cagtttaataatatgatgaatctgaaggaagataagctcagagggagatacagagacaca
taccatgctcttctgtggctaagggagaacaaagaccaatttaaaagaagtgtttgtgaa
cccatgatgcttgcaataaacatgaaagaccatagacatgctaagtatgttgaaaatcat
atttcagctaatgatatgagggcgtttgtttttgaaagtcaagaggacatggaaatattt
cttcgggaggtgcgtgaccaccagaaattaaaagttaacgctgtatgtgcacccaatgag
tcatgtgctgaaaacagaccttcaagatcagttgaagaattgcaccaatatggttttttc
tcttatttacgagaattatttgatgctcctcatcctgtgatgagttacctttgttcccag
tatcgtgttcatgaagtccctgtgggaactgagaagaccagaagcatgattgaaagggtc
atacaggaaaccaaatttaagcaaatctacacagcagaagaaaggtattcagtgaaagtg
tcatcttatacaaaccaaactatttctagtaacacatctctgagaccagcgcagtttctc
accgtcacagtggatgcagatgaaagaaagcagttggaaaaccaactaatggaaattaat
agaaatttgcagctccgggattcccaattgcgtacattatttgagaggcaaaagtgtctg
gaacgcaaagataatgagctgagacagcaaaagaaagaacatttggagagaaaaaacaaa
aggaaacaactggaatcaaaaattagtatgaaacatgatagtttgaaacagatggagcaa
gataccatcaatctagaagaggagtctcaacaaacaaatgccaggatcaaagaaattaat
atccaaaaagcaaaatttgttacagaattaatgcaactcataaagaactgcataacattg
aacatcctcaaagtggatttggttcttgagagcactacagtgacttccaagaagaataga
ctagaatctgattataaagcagcaactgtacaactaagagctttagagcaacaagtttct
gacttgggtgaaagaaaacgtgttcttttggagaggtgcaagggattgatgaagaaagct
agacaggcatgtaatctcacacctgatcaagaaattccaaaagactttcagatggcattc
caggaccttccaaacacattggatgaaattgatgctttactgaatgaagagaaatcaaga
gcttcctgcttcacaggcctaaatgcttcagttgtggaagaatacaataaaagggcacaa
gaaatacagcaagtaacggaggaactagaggaaaagaaaagtgaattggagagctatagg
caaaacatttcacaagttaaagaaaggtggctaacacctttgaaacagctggttgaacaa
attaatgaaaagttcagtagtttttttagttctatgcagtgtgctggtgaagttgatctt
catacagaaaatgaggaggaatacgacaaatatgggattcgaattagagttaaattccgt
agtaatacccaactgcatgaactgactccccaccatcagagtggaggtgagagaagtgtt
tcaactatgttgtacttgatggctctgcaggaactcaacagatgtcctttcagggttgta
gatgaaataaatcagggaatggacccagtcaatgagaggagagtttttgaaatggttgtg
aagactgcttgtaaagagagcacttctcagtatttctttattacaccaaagctcctgcag
aatctcacatatgttgaaaaaatgacagtgttgtttgtctacaatggaccttttatgcta
gaaccaactaaatggaacttaaaggcatttcgtaagaggcgacgacaaattgagcaaatg
gatcagtag
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