Pelodiscus sinensis (Chinese soft-shelled turtle): 102457121
Help
Entry
102457121 CDS
T02980
Symbol
PRDM16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss00310
Lysine degradation
pss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102457121 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pss03000
]
102457121 (PRDM16)
03036 Chromosome and associated proteins [BR:
pss03036
]
102457121 (PRDM16)
Enzymes [BR:
pss01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
102457121 (PRDM16)
Transcription factors [BR:
pss03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102457121 (PRDM16)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102457121 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
SET
zf-C2H2_11
zf-met
zf-H2C2_5
Zap1_zf1
zf-BED
C2CH-4th_BIRD-IDD
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
102457121
NCBI-ProteinID:
XP_075762681
Ensembl:
ENSPSIG00000004093
LinkDB
All DBs
Position
23:20855297..21394425
Genome browser
AA seq
1266 aa
AA seq
DB search
MRSKARARKLPKSDSEIVNNMYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDF
TPKEGSPYEAPVYIPDDIPVPPDFELKESSIPGAGLGIWAKKKIEVGERFGPYMTIPRTT
LKETNFGWEQVLTDPEVASQEGCIKKIADDLGNEKFCADANQTGAGNWLKYIRVACSCDE
QNLAVCPINDQIYYKVIKEIGPGEELLVYMKEGAFSLGNMPPSLEEEPTFRCEDCDELFQ
SKLDLRRHKKYACNSVGSLYETLNEEIKQEGLSDGQVYECKDCERMFPNKYSLEQHMIIH
TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGA
RAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHYNPGGIFAPGLPLTPTSMMDKSKPSPNLNHASL
GFNDYFPSRPHPGGIPFSPAPPGFPALTPGFPGIFPPSLYPRPPLLPPTPLLKSPLNHTQ
DAKLPSPLGNPALPLISAVSNSNPPVSGEEKFESSLENSYLDKLKARNSDLSDGSDFEDV
NTTTGTDLETTTGTGSDLESDVESDRDKGKDKSKQAESKPDFVSSSAPAGSTNNVSELPL
FYSQHSFFPPPEEQLLPTTGAANDSIKAIASIAEKYFGPGFMGMQEKKIGSLPYHSMFPF
QFLPNFPHSLYPFADRTLNHNLLVKAEPKSPRDLHKVGSTSAESPFDLTTKPKEMKPILP
PPKVLPAPSSGEEQPLDLSIGNRIRASQNGGREPRKNHIYGERKLMASDVLPKMSQAQLP
QQPSLHYAKPSPFFMDPIYSRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKL
ESFAAMKADTGASLQPLPHHSFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTR
HLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLK
KHEHENVPVSQHSGVITNHLGTRASSPNSESDNHALLDEKEDSYFSEIRNFIANNEMNQA
STLTEKRPEIQDMDSNSQCHGLANEKTDDVDEEEEELEEEDDDSLTGKSQDETVSPTTEP
RGTFEDEEEDEPASLTMSFDHTRRCIEEDEAGLLDLEQMPNFGKGLDLRKAAEEAFDVKD
VFNSTLDSETIKQTLYRQAKNQAYAMMLSLSENTPLHTSSQNSLDAWLNMAGAASESGTF
NPINHL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgagatccaaggcgagggcgagaaagctgcccaaaagtgacagtgagattgtaaataat
atgtatgagacagaccctgatctcctggctggtgagagtgcagaggaggaaacagaggac
agtattatgtcccctatccccgttggacctccatcaccttttcctaccagtgaggacttc
acccccaaggaaggctcaccttacgaagcccccgtctacattcccgatgacattccagtc
ccaccagactttgaactcaaagaatcctcgattccaggggcagggctggggatatgggcc
aaaaagaagatcgaagtgggggaaagatttggaccttacatgacaataccaaggaccaca
ttaaaggaaacaaactttggatgggagcaggtactgactgatcctgaggtggcatcccaa
gagggctgtataaagaagattgctgatgacctgggaaacgagaaattctgtgctgatgct
aatcagactggagctggaaattggctgaaatacatccgggtggcctgttcctgtgatgaa
caaaatctagctgtatgtcccattaatgatcagatctattacaaagttattaaagaaatt
gggccgggagaagaactgctggtgtatatgaaggaaggtgccttttcacttgggaacatg
ccacctagtttggaagaagagcccacgtttcgctgtgaggactgcgatgaactcttccag
tcgaagctggacctgcggcgacacaagaaatatgcctgcaactctgtcggctcgctgtat
gagacgctgaatgaggagatcaaacaggaagggctaagcgatggccaggtctacgagtgc
aaagactgtgagagaatgttccccaataaatacagcctggagcagcacatgataatccac
acggaggagagggagtacaagtgtgaccaatgtccaaaggctttcaactggaaatcgaac
ctgattcgtcaccagatgtcacatgacagtggcaagcgatttgaatgtgaaaactgtgtg
aaggtgtttactgaccctagcaacctccagcggcacatccgttcccagcacgttggtgcg
cgagcccacgcctgcccggactgcggcaaaacctttgccacctcgtctggcctcaaacaa
cacaagcacattcacagcactgtcaaacctttcatatgtgaggtctgccacaaatcctac
acacagttctccaacctctgccgccacaagcggatgcatgcggactgtcgcacccagatc
aaatgcaaggactgcggccagatgttcagcactacctcctctctcaacaagcaccggcgc
ttctgcgagggcaagaaccattacaacccgggggggatttttgccccaggcctaccttta
acgcccacctccatgatggacaaatccaaaccctcccccaacctcaaccatgccagcctg
gggttcaatgattacttcccatcccggcctcaccccgggggtatcccattctcccctgct
cccccaggttttccggcccttactccagggttcccagggatttttcctccctctctatac
cccaggcctcctctgttacctcccaccccgctgctcaagagccccctcaaccacactcaa
gacgcaaagcttcccagccctctggggaacccagccctgccattgatttccgccgtcagc
aacagtaacccgcctgtctccggggaggagaagttcgaaagcagcctggaaaactcctac
ctggacaagctaaaagccaggaacagcgacctgtccgacgggagcgacttcgaggacgtc
aacaccaccacgggcacggacctcgagaccaccaccgggactggctccgacctggagagc
gacgtggagagcgaccgggacaaggggaaagacaaaagcaaacaggcggagagcaagccc
gattttgtcagcagttccgcgcccgccggctccaccaacaacgtgagcgagcttcccctt
ttctattcacagcactccttcttccctccccccgaggagcagctgctccccacgacaggg
gcagccaatgactcgataaaagcgatcgcctctattgccgagaaatatttcggccccggc
tttatggggatgcaggagaagaagatcggctccctcccataccactccatgttccccttt
cagttcctccccaatttcccccattccctgtatcctttcgcggaccggaccctcaatcac
aacttgctggtcaaggcagaaccaaagtcacctcgggaccttcacaaagtggggagcacc
agcgcagagtcgcccttcgatctcaccaccaaacccaaagagatgaagccaatcttgcca
ccccccaaggtcttgccagccccgtcttctggggaggagcagccactggatctaagcatc
ggcaaccgcatccgagccagccagaatggagggcgggagccccggaagaaccacatatat
ggggaacggaagctcatggccagcgacgtactacccaagatgtcgcaggctcagctgccg
cagcagccgtccttgcattatgcgaagccatccccctttttcatggaccccatatacagc
agggtggagaagcggaaggtgacagacccagtgggtgccctaaaggagaagtacttgcga
ccttccccgctgctttttcacccgcagatgtcagccatcgaaaccatgacagagaaactg
gagagctttgcggccatgaaagcagacaccggcgcctccctgcagcccctcccacatcac
tccttcaacttccggtccccgcccccaacgctgtccgaccccatcctacgcaagggcaag
gaacgctatacctgcaggtactgcggtaagatcttcccccggtcagcgaatctgacaagg
catcttcggacgcacacaggagaacaaccctacaggtgtaaatactgtgacaggtcattc
agcatttcctctaacctccagcggcacgttcgaaacatccataacaaggagaagccattc
aaatgtcacttgtgtaaccgatgctttgggcagcagaccaacttggaccgacaccttaag
aagcatgaacatgagaatgtgccagtgagccagcactcaggggtcatcactaaccacctt
gggacccgcgcttcctccccaaactcggagtcagacaaccatgcacttttagacgagaaa
gaggactcgtatttctctgaaatcagaaattttattgcaaataacgagatgaatcaagcg
tcgactttaacagagaaaaggccagaaatccaagacatggacagcaactcccagtgtcat
gggttagcaaacgagaaaacggacgatgtggacgaggaggaggaagaactggaggaggaa
gatgacgacagcctgacagggaagtcccaggatgaaaccgtatcgcccacaacggagccc
cgaggaacgtttgaggatgaggaggaggatgaacccgcatctctcaccatgagctttgac
catacccgaaggtgtattgaggaggacgaagccggcttgttagatttggagcagatgccg
aattttgggaaggggctggatcttcgcaaagcagccgaggaagcatttgacgttaaagat
gtgtttaattccaccttagactctgagacaataaaacagactctgtacaggcaggctaaa
aaccaggcttatgcaatgatgctgtccctttctgagaacactccccttcatacttcctcc
cagaattctctggatgcttggttgaacatggcaggagcagcgtcagagtcggggaccttt
aaccccatcaaccacctctga
DBGET
integrated database retrieval system
