Pelodiscus sinensis (Chinese soft-shelled turtle): 102457330
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Entry
102457330 CDS
T02980
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102457330
Spliceosome [BR:
pss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
102457330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_17
TPR_MalT
DUF7877
Motif
Other DBs
NCBI-GeneID:
102457330
NCBI-ProteinID:
XP_006136641
UniProt:
K7FGB4
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MAAEGLEAPGSPRCGEAGTEKAPGGGSEGGETGLDVGGPSQDLLPKAPNDSTDKQEDTKA
VQGCNGVNAEASVMVSGLKDPDASEGNCQYPAPKEGHAAVATPVSTEEPSPSYPLEFEKF
WKAAQENPHDFTAWTELLQYVEQENHIFAARKAFDAFFAHYPYCYGYWKKYADMERRFDF
SKETEEVFERGLQSIPLSMDLWIHYISYLQATLNMNLPESIQKIHSVFESAVAAAGMDFR
SDKLWEMYVEWEREQGDLKCITTIYDRVLATPTQMYSHHWEKFKEHVMSNSPKDILSAEE
LLWLQSKITTGTVQKRVETEVEEVPPGEDLPPGVEVKPEKGADAQGDLDQDKIRELVISI
RQQVYTQNETEVSKRWNFEEGIKRPYFHVKPLERAQLKNWRDYLDFEITSGSHERTIVLF
ERCVIACALYEEFWIKYTKYLENHTVTGARSVFQRACGYHLPRKPNIHLLWAAFEEKQGD
LEEARRILKSFEESIPGLAMVRLRRVSLERRHGNLEAAEALLQEAIRDNEGMPLASFYAI
KLARQVLKVQKNLIKARKILMEALEKDPENAKLYTNLLEIEFSADVRQNEGNTMNCFERA
LNSGLPEETKIVFSQRRVEFLEDFGSSIHSLLTAYDEHQKFLKHQMTRKRAPENGCSDEP
EDKKLRAEDSHGMLNPGITAAGMAPAMGGDMSTNPAAAYNYNTWYQNYGVYGYQNPWNYN
QYYPHS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgaagggttggaagcgccggggagcccacgctgtggcgaagccggcaccgag
aaagcccccggtgggggaagcgagggtggggagaccggcctggacgtgggcggtcccagc
caagacttgctcccgaaagcaccaaatgactctaccgataagcaggaagacaccaaagca
gtgcaagggtgcaatggagttaatgctgaagccagcgtgatggtgtcaggactcaaagac
cctgacgctagtgaagggaactgtcaatatccagcccccaaggagggacatgcagcagtg
gctacccctgtgtcaacagaagaaccttccccctcctaccctctggagtttgagaagttc
tggaaggcagctcaggagaatcctcatgatttcacggcatggacagaattgctgcagtat
gtagaacaagagaatcacatctttgcagcacgaaaagcctttgatgcgttttttgctcac
tacccctattgctacggctactggaagaagtatgcagacatggagaggcgttttgacttc
agcaaggagacagaggaggtgttcgagcgagggctgcagtccatccccctcagcatggac
ctctggatccattacatctcttacctgcaggctaccttaaatatgaaccttcctgagtcc
atacagaagatccacagtgtgtttgagtcagccgtagctgctgcaggaatggacttccgc
tcagacaaattgtgggagatgtacgtggagtgggaaagagaacaaggtgatctgaaatgc
atcactactatttatgaccgagtgctcgccacaccaacccagatgtacagccaccactgg
gaaaagttcaaggagcatgtgatgagcaactcccctaaagacatcctgtctgcagaggag
ctgctctggttgcaatccaagatcaccacaggaactgtacagaagcgtgtggagacagag
gtggaagaggtgccacccggggaagacttgcctccaggggtggaagtcaagccagaaaaa
ggagctgatgcccagggagacctggaccaggacaagatccgggagctcgttatctccatc
cgacagcaagtgtatacccagaacgagacagaagtcagcaagcgctggaactttgaggaa
gggatcaagaggccatactttcatgtcaagcccctggaacgagcacagttgaagaactgg
cgcgactaccttgactttgagatcaccagtggctcccatgagcgcaccattgtgcttttt
gagcgctgtgtcattgcctgtgccctttacgaggagttctggatcaaatacacgaaatac
cttgagaaccacactgtgactggggccaggagtgtcttccaacgagcttgtggctaccat
ctccccaggaagcctaacatccacctcctgtgggctgcatttgaagagaagcaaggagat
ctggaggaggcacgtcgcatcttgaagtcttttgaggagtccatccctgggctagccatg
gttcggctgcggagagtaagcttggagcggcgacatggcaacctggaggcagctgaagct
ctgctgcaggaagccatacgggacaatgaggggatgcccctggcctcattttatgccatt
aagctggcccgacaggtgctgaaagttcagaagaatctaataaaggctcggaagattctc
atggaagcattagagaaagatccggaaaatgcaaagctctacaccaatctcctggagata
gagttcagcgctgatgtcaggcaaaatgaaggcaacaccatgaactgctttgagagagcc
ctgaacagtggcctccctgaggagaccaagattgtcttctcacagcggagagtggagttc
cttgaggactttggttctagcatacacagcttgctgacagcgtatgatgaacatcagaag
ttccttaagcaccagatgactaggaaaagagcccctgagaatggctgctctgatgaacca
gaagacaaaaagctgagagctgaggattctcatgggatgctcaatcctgggattactgct
gcaggcatggcaccagcgatgggcggagacatgagcaccaatccagcagccgcttataac
tacaacacctggtatcagaactacggcgtctacgggtatcaaaatccatggaactacaac
cagtattacccacacagctga
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