KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102457490
Entry
102457490         CDS       T02980                                 
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8
  KO
K10570  DNA excision repair protein ERCC-8
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03420  Nucleotide excision repair
pss04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102457490 (ERCC8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102457490 (ERCC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pss04121]
    102457490 (ERCC8)
   03400 DNA repair and recombination proteins [BR:pss03400]
    102457490 (ERCC8)
Ubiquitin system [BR:pss04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     102457490 (ERCC8)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      102457490 (ERCC8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR55 WD_LRWD1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_IFT122_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 102457490
NCBI-ProteinID: XP_014434688
Ensembl: ENSPSIG00000002613
LinkDB
Position
Unknown
AA seq 337 aa
MLSGGSDGIIVLYDLENFSRKPCYTCKAICSVGRSHPDVHKFSVETVQWYPHDTGMFTSS
SFDKTLKIWDTNTLQPADVFTFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSC
SQILQGHRQEVLAVAWSPRYEYVLATASADSRVKLWDVRRASGCLITLDQHNGEKSKASS
EAANTAHNGRVNGLCFTSDGLHLLTIGTDNRMRLWNSSSGENTLVNYGKVCNESRKGLKF
TISIGCDPEFAFVPYGSTIAVYTIHSGELITMLRGHYSTVDCCVFQPNFQELYSGSKDCN
ILAWVPALREPIPDEDTEKQHLNPAFEDGWSSSDDEG
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgttatcaggaggatcagatggaataattgtactttatgaccttgaaaacttcagcaga
aaaccatgttatacatgtaaagcaatttgttctgtgggcaggagccatcctgatgtacat
aaattcagtgtagagacagttcaatggtaccctcatgacactggcatgtttacatcaagc
tcatttgataaaaccctgaaaatatgggatacaaacacattacaacctgcagatgtattt
acttttgagggaacagtttatagccatcatatgtctccagttgccactaagcattgctta
atagcagttggtaccaaaagccccaaagtacagctttgtgacttgaagtctggatcctgt
tctcaaattctgcagggtcacagacaggaagttctggcagtggcctggtccccgcgttat
gagtatgtcttggcaactgcaagtgctgacagtagagtaaaactgtgggatgtgaggaga
gcgtccggatgtctgattactcttgatcagcacaatggggagaaatcaaaagcatcttct
gaagcagcaaacactgctcataatggacgagttaatggcttatgctttacaagtgatggg
cttcatcttctgactattggtacggataaccggatgagactctggaatagttccagtgga
gaaaacacactggtgaactacggaaaagtttgtaatgaaagcagaaaaggtctcaaattc
acgatctctattggctgtgatccagaatttgcatttgtaccatatggtagcaccattgct
gtttatacaattcactcaggagaactgataactatgcttaggggacattatagtactgtt
gactgctgtgtatttcagcccaattttcaggaactatacagtggtagcaaagattgcaat
atccttgcatgggttccagctctacgagagccaattcctgatgaagatactgaaaagcaa
cacttaaatccagcatttgaagatggatggagcagcagtgatgatgaaggatga

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