Pelodiscus sinensis (Chinese soft-shelled turtle): 102457566
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Entry
102457566 CDS
T02980
Symbol
NPHP3
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-3
KO
K19360
nephrocystin-3
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pss03037
]
102457566 (NPHP3)
Cilium and associated proteins [BR:
pss03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
102457566 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_17
TPR_19
NPHP3_N
TPR_14
TPR_11
NACHT
KAP_NTPase
AAA_16
AAA_22
DUF2225
AAA_19
AAA_14
14-3-3
T2SSE
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
102457566
NCBI-ProteinID:
XP_014434097
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MGTASSLVSPAGPGGEVIEDAYGRGGGEACEIPVEVKPKARLLRSSFRRVGASRPGGLIG
ASFKSTASVQELECMAEYERLKKEYEIFRVSKNNEVASMVKKEAKMDLENKRLRAELQAL
QKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKREL
ETKLQRLQAQGIQVFDPGESDSDDNCTEVTATGAPSEYWTGGVLGSEPSMGSMMQLQQSF
RGPEFAHSSIDVEGPFANINRDDWDAAIASLLQVTPLFSHSLWSNTVRCYLINTDETQPE
VDIFIRNYSPKLQRICETMGYFFQVVHFPGENGNYFQAVRKWEIEKSSLVILFIHLTLPS
CLLEDCEEALLKNPEGKPRLIYRRIEDGKVSSDPVHQLTEQACYMNKAKLIDHMGGVEEG
VCEIYNCVEKIIKQDILGCESSEVEGKDLGSKEDSTAPEEEVFGDVLWDAHDEQEQMEAF
QQASHSTCELGFEKYYERLNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKHSPNT
LILYHFVGRPMSTSSESALIIKRLTLKLMQHSWLVSPLTLDPAKLLEEFPRWLEKLSARH
QGSIIIIIDSIDQIQQAEKHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLEPLSS
KDVKSLISAVCSCANIKLTKEQEKKLEKHCRSATTCNALYVTLLGKMIASAGSAGNIDEI
LQQCFQCQDTVSLYRLVLQLVQKSMLNDKDKHLMKEVLCLIHVSHNGVSESELMELYPGL
SCAVLASLVHSLHKLCMLTYGCGLLKFQHLQAWETVRLEYMEEGQNIMSAYREKLIDYFA
TQLSQGRVTWRSADELPWLFQQQGNKQKLXRXXXXQNLYKRGHFAELLSYWQLVGKDKSS
MAAEYFDSLKQYEKNCEAEESMTCLADLYETLGRFLKDLGLLSQAVAPLQRSLEIRETAL
DPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEISENAYGAEHPRVARELDALATLY
QKQNRYEQAEQLRKKSFKMRQKAARRKGNLFGFALLRQRALQLEELTLGKDTPDNARTLN
ELGVLYYLQNNLETAELFLKRSLEMRERVLGPEHSDCAQSLNNLAALYNEKKHYDKAEEL
YERALEIRRKALAPDHPSLAYTVKHLAVLYKKLGKLDKAVPLYELAVEIRQKSFGPKHPS
VATALVNLAVLYCQMKKHSEALPLYECALKIYEDSFGHMHPRVGETLKNLAVLSYERGDF
EKAAELYKRAMEIKEAETLFIGGKAASRPSSSGDTFSLRSALSPNVFLDHGQR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcttcctccctggtgagcccagcgggcccgggcggggaggtgatcgaggat
gcctatgggagaggtggcggcgaagcctgtgagatcccagtggaggtgaagcccaaagct
cgcctgttgcgcagctctttccgccgggtgggcgcatcacggcctggaggcctcattggg
gccagcttcaaatctactgcctcagtacaggagttggagtgcatggctgagtatgagcgt
ctgaagaaagaatacgagatcttccgtgtcagcaagaacaatgaggtggcttctatggtc
aagaaagaagccaagatggacctggagaataagagactccgggcagagctccaggctctt
cagaaaacttaccagaaaatacttagagagaaagaaagtgctttagaagccaaatatcaa
gccatggagagagcggctacatttgaacatgaccgagacaaagtcaaaagacagttcaag
attttcagggaaactaaggaaaatgaaattcaggatttactgagggccaaacgagagctg
gagacaaaacttcagagacttcaagcccaagggatccaagtgtttgatcctggagaatct
gattcagatgataattgcacagaagtcactgcaactggagccccgtctgaatattggaca
ggtggagtgttgggaagtgagccatccatgggaagtatgatgcaacttcagcagtctttc
agagggcctgagtttgctcatagttccatagatgtggaaggaccatttgcaaacataaac
agagatgactgggatgcagctattgcgagtttattgcaggtcactccactgttttctcac
tctctgtggagtaacactgtcaggtgctatctcattaatacagatgagactcaacctgaa
gtggacatcttcattaggaactactcaccaaagcttcaaagaatatgtgaaaccatgggg
tacttctttcaagtagttcattttccaggagaaaatggaaattatttccaggctgtgaga
aaatgggaaattgagaaaagttccttagtcattttgttcatccatttaactttgccaagc
tgtttgctggaggactgtgaagaagccttattgaaaaatcctgaaggaaagccccggctg
atttaccgcagaatagaagatggtaaagtcagctcagaccccgtccatcagttaactgag
caagcttgttatatgaacaaagcaaagctcattgatcacatgggaggagtggaagaagga
gtgtgtgaaatctataattgtgtggaaaagatcattaaacaggatatattgggctgtgaa
agttcagaagtagaaggcaaggatctgggtagtaaagaggattccactgccccggaagag
gaagtgtttggagatgtactgtgggatgcacacgatgaacaagaacagatggaagctttc
caacaggcatctcattcaacatgtgaattaggatttgaaaaatattatgaacgtctaaat
gatctagtggcagccccagcacctatcccacctcttcttgtgtctggaggaccgggctct
ggcaaatcccttctcctatcaaaatggattcaactgcaacagaagcattcaccaaacaca
ctaattctctatcattttgttgggaggcccatgtctaccagttcagaatccgcactaata
atcaaacgacttactttaaagctcatgcagcattcttggttagtgtcacctttaacgctg
gatccagctaagcttttggaagagtttcctcgctggctggaaaaactttctgctcgtcat
caaggcagcattatcataattattgactctattgaccaaatacagcaagctgaaaaacat
atgaaatggctgatagaccccctgccagtgaatgtgagggtgattgtatccgtgaatgtg
gaaacatgtccgcaggcatggaggttatggccaactcttcatctggaaccactgagttct
aaggatgtgaaatctctcattagtgcagtatgtagctgtgccaatattaaattgaccaaa
gaacaggagaagaaacttgagaaacattgtcgttctgccacaacttgcaatgctttatat
gtcactctattgggcaaaatgattgctagtgctgggagtgcaggaaatattgatgaaatc
cttcaacagtgtttccagtgtcaagatacggtatcattatacagacttgttttgcaatta
gttcagaagtccatgttgaacgataaagataaacaccttatgaaagaggttctctgtctc
atccatgtcagccacaatggagtgagtgagtctgaactgatggaactttatcctggattg
tcctgtgctgtgttagcctccctagttcacagtttgcacaagctgtgtatgctgacatat
ggctgtggtttgctcaagtttcagcacctccaggcttgggaaacagtgaggctagaatac
atggaagaaggtcaaaatataatgtctgcttacagagaaaaactaatagactacttcgcc
acacagctgagtcaaggcagagtgacttggagaagtgcagatgaacttccttggcttttc
caacagcagggcaataagcagaagcttnncagannnnnnnnnnctcagaatctttacaaa
agggggcattttgcagaattattgagttactggcagcttgtcggaaaagataagagttca
atggcagcagagtattttgactctctgaagcaatatgagaaaaactgtgaggcagaggaa
agtatgacctgtctggctgatctttatgagactttgggaagattcttaaaagatctaggc
cttctcagccaggcagttgctcctcttcagcgttctctggaaattcgggaaacggcactg
gatccagatcacccgagggtagcacagtccctccatcagctagcaggagtttatgtgcaa
tggaagaagtttggaaatgccgagcaattatataagcaggctctggaaatctctgaaaat
gcttatggtgctgaacatcccagggttgctcgtgaactggatgcacttgcaacattatac
caaaaacagaacagatatgaacaagctgagcagctgagaaaaaaatcctttaagatgcga
cagaaagcagcgaggcggaaaggcaatttgtttggatttgctcttctacgtcaacgagcc
ttgcagctggaagagctcacattgggcaaagacacaccagataatgctcgaaccctcaat
gagcttggagttctctattatctgcagaataatctggagacagcagaactttttctgaag
cgctccctagaaatgagggagagggtcttgggaccagaacactcagattgtgcacagtct
ttgaacaatctggcagctctgtataatgagaagaaacactatgataaagctgaggaactc
tatgaaagagccttagaaattaggaggaaagcactagctcctgatcatccctcactggct
tacaccgtgaaacaccttgcagtactctacaaaaagttgggaaagcttgacaaggcagtg
cctctgtatgagttggctgttgaaattcgacaaaaatcatttggtccaaagcatcctagt
gtagctactgccttggtaaacctggctgttctatattgtcaaatgaaaaagcacagtgaa
gccttacctctctatgaatgtgcattaaagatttatgaagacagctttggtcatatgcat
cctcgtgtaggagaaacactaaaaaacttagctgtgctgagctatgaacgaggagatttc
gagaaggctgctgagctgtacaagagagccatggaaataaaagaagcagagactttgttt
ataggaggaaaagcagcttcccgcccctcatcaagtggagacactttcagtttaagaagt
gcattatctccaaatgtcttcctagaccatgggcaaaggtga
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integrated database retrieval system
