Pelodiscus sinensis (Chinese soft-shelled turtle): 102457576
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Entry
102457576 CDS
T02980
Symbol
PTCHD1
Name
(RefSeq) LOW QUALITY PROTEIN: patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pss04990
]
102457576 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
pss04990
]
Other domain-containing proteins
Patched domain-containing proteins
102457576 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
102457576
NCBI-ProteinID:
XP_006112580
LinkDB
All DBs
Position
Unknown
AA seq
917 aa
AA seq
DB search
MVLPRLWESFRAHRAHLARLSSLCTRMLRQVLHRGLRTSFSRLGHFIASHPVFFASAPVL
ISILLGASFSRYQIEESVEYLLAPKHSLAKIERRLRTSFSRLGHFIASHPVFFASAPVLI
SILLGASFSRREGRVIITSFRKANMLDQHHTDLILKLHSAVIRIQVQRPGFNYTFAHICI
LNNDKTCIVDDIVHVLEELKSARSSNRTNFAITYPITHLKDGREVYNGHQLGGVTVHSKD
RVKSAEAIQLTYYLQAINSLNDMVAEKWESIFCDTVELFQKSNRKVKMYPFTSSSLKEDF
QKTSRVSERYLTTSLVLVITLAILFCSMQDCVRSKPWLGLLGLLTVSLATLTAAGIINLT
GGKYNSTFLGIPFIMLGHGLYGTFEMLSSWRKTREDQHVKERTAAVFADSMLSFSLTTAM
YLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVFTGYIENNYQHSIFC
RKVPKPEVLQEKPAWYRFLLTAKFSEDTTDSEETNTYESHLLVCFLKRYYCDWITNTYVK
PFVVLFYLVYISFALMGYLQVNEGSDLSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIY
ESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKAP
QYAHFSEDIIFSKKYNNEVDVVASRMFLVAKTMETKREELYDLLETLRKLSLTSKVKFIV
FNPSFVYMDRYASSVGAPLQNSCISASFLXLINVWLTLTVASVEFGVIGFMTLWKVELDC
ISVLCLIYGINYTIDNCAPLLSTFVLGKDFTRTKWVKNALEVHGVAILQGYLCYIVGLIP
LAAVPSNLTRTLFRCLFLIALVTFFHCFAILPVILTFVPPSKKKRKEKKNPENREEIECV
EMVDMDSTRVVDQITTV
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcctcggctctgggagagcttcagagcccaccgcgcgcacctcgcccgcctg
agctccctctgcactaggatgttgcggcaggttctgcacagggggctgagaacgtctttt
tccagactcggccacttcattgccagtcacccggtgttcttcgcctccgcacccgtgctc
atctcgattttgctgggggccagcttcagcaggtaccagatcgaggaaagcgtggagtat
ctcctggcccccaaacacagcctggccaagatcgagaggaggctgagaacgtctttttcc
agactcggccacttcattgccagtcacccggtgttcttcgcctccgcacccgtgctcatc
tcgattttgctgggggccagcttcagcaggagggagggcagggtcatcatcacatccttc
aggaaggcgaacatgctggaccaacatcatactgatctgatcttaaagttacactcagct
gtgatcaggatccaagtacaaagacctggtttcaattatacatttgcccatatatgtatc
ctgaataatgacaagacttgcatagtggacgacatagtgcatgtactggaggagctaaag
tcagctcgatcttctaatcgaactaattttgctatcacatatccaataactcacttaaag
gatggcagggaagtatataatgggcaccagcttggcggggttaccgtacacagtaaagat
cgagtgaagtctgcagaagccattcagctcacctactatttgcaggcaatcaactctttg
aatgacatggtagcagaaaagtgggaatctatcttttgtgacactgttgaacttttccag
aaatccaacaggaaagtcaaaatgtatcccttcacttcgtcttcgctaaaggaggatttc
cagaagactagcagggtgtcagaacgttacctgaccacaagcctggtccttgtgatcact
ttggccatactcttctgttccatgcaggattgtgtccgcagcaaaccctggcttggcctt
ttaggattgttaaccgtgagcttagccactctgactgcagctggaatcatcaatctgact
ggtgggaaatacaattccaccttcctgggaattcccttcatcatgttaggtcatgggtta
tatgggacttttgaaatgttgtcctcctggaggaaaactagagaagaccaacatgttaaa
gagagaactgcagctgtgtttgcagactccatgctctccttttctctcaccactgccatg
tacctggtcacttttggaataggtgccagtcctttcactaacattgaagcagctaggatt
ttctgctgcaattcctgtattgcaattttcttcaactacctctacgtactgtccttttat
ggttccagcctggtgtttactggctacatagaaaacaactaccagcatagtatcttctgc
agaaaggtaccaaaaccagaggtattgcaagagaagcctgcgtggtataggtttcttctg
acagccaaattcagcgaggacacaacggattcagaggaaacaaatacttatgaaagtcat
cttttggtgtgtttcctcaaacgctattactgtgactggataacaaacacttacgtcaag
ccttttgtagttctcttttaccttgtttatatttcctttgccttaatgggctacctgcag
gtcaatgaagggtcagaccttagtaacatcgtagcaactgcgacacgaactattgaatac
actactgcccagcaaaagtacttcagtaactacagcccagtcattgggttttatatctat
gagtcaatagaatattggaacacaagtgtccaagaagatgtgctagagtataccaagggg
tttgtgaggatatcttggtttgagagctatttaaattatcttaggaaactcaatatatca
acaggattgcccaaaaagaattttactgacatgttgaggaactctttcctgaaagctccc
cagtatgcccatttttcagaggatatcatcttttccaagaaatacaacaatgaagttgat
gtagtggcttctaggatgttcttggtggctaagacaatggaaaccaagagagaagaactc
tatgatctccttgaaaccttgaggaaactctctctcacatcaaaagtgaaattcattgtt
ttcaatccatcattcgtgtacatggatcgttacgcctcctcagtgggagcccccttacaa
aactcctgcatcagtgcttcctttctgnctctaatcaatgtctggctcactctaactgtt
gcctcagtcgaatttggagtcataggtttcatgaccttgtggaaagtggaactggactgt
atttctgtcttgtgcttaatttatgggattaattatacaattgacaactgtgctccactg
ttatcaacctttgtcctgggcaaagatttcacaagaactaaatgggtaaaaaatgcccta
gaagtgcatggggtagcgattttacagggctacctctgctatattgttggtctgattcct
cttgcagctgtgccttcaaatctgacccgtacactgttcaggtgcttgtttttaatagca
ttagtcaccttctttcactgctttgccattttacctgtgatactgacttttgtgccacca
tccaagaaaaaaaggaaagagaagaagaatcctgaaaaccgtgaggaaatagagtgtgtt
gaaatggtggatatggatagtacccgcgtggttgaccaaattacaacagtctga
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