Pelodiscus sinensis (Chinese soft-shelled turtle): 102457736
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Entry
102457736 CDS
T02980
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X3
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04137
Mitophagy - animal
pss04140
Autophagy - animal
pss04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102457736 (HIF1A)
04137 Mitophagy - animal
102457736 (HIF1A)
04148 Efferocytosis
102457736 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pss03000
]
102457736 (HIF1A)
Transcription factors [BR:
pss03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
102457736 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
102457736
NCBI-ProteinID:
XP_006110827
Ensembl:
ENSPSIG00000010467
UniProt:
K7FUG2
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MLKFKISSDRRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYL
RMRKLLDSSDLETEAKMEKEMNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLTQFEL
TGHSVFDFTHPCDHEELKEMLTHRNGLVKKGKEQNTERSFFLRMKCTLTSRGRTVNIKSA
TWKVLHCTGHVRVYDTCNNQTHCGYKKPPMTCLVLICVPIPHPSNIEVPLDSKTFLSRHS
LDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFAKGQVTTGQYRM
LAKHGGYVWVETQATVIYSTKNSQPQCIVCVNYVLSEIVQEELFFSLGQTERVLKPVESV
DMNMTKIFSKADLEDSNSLFEKLKKEPDALTLLAPAPGDTIVSLDFDSNESDEQQFDEVP
LYNDVMLPSSSEKLQNINLAISPLPASETTKPLRSNADPALNREVVSKLESNTEPLELAF
SSRPRQEQPSSPSDTSTNQSSPEPHSPNDYCFDVDNDMANEFKLELVEKLFAIDTEAKNP
FSTQETDLDLEMLAPYIPMDDDFQLRSFDQPPPLESGCANSQNVASTVFHQTQTISAAAE
EIIPVKTECMDDVKTLIVSQSPVLVINEIDSTPASPYGGNRSRTASPIRAGKGTLEQTEK
SYPGTPNLLTVTLSNRSNPVDEELNPKMLALHNSQRKRKMEYDGSLFQAVGIGSLFQQSG
DCGTNASLWKRVKGCKSNGQNGVGQKTIILLSTDIASKLLGQSMDETGLPQLTSYDCEVN
APIQGSRNLLQGEELLRALDQVN
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaattcaagattagctcagatcggagaaaggagaagtctagagatgcagccaga
tgcagaagaagcaaggaatcagaagtcttctatgaacttgctcaccagctgcctcttcct
catacagtgagcgcacaccttgataaggcttccattatgaggctgacaatcagctaccta
cgcatgagaaagctgttagactcaagtgacctggagacagaagccaaaatggagaaggag
atgaattgcttttacttaaaagcccttgatggatttgtcatggttctttccgaggatggt
gacatgatttacatgtctgaaaatgtgaacaagtgtatgggcctcactcagtttgagctg
accgggcacagtgtgttcgattttacccatccatgtgaccacgaagagctgaaagaaatg
cttacgcacagaaatggtcttgtgaaaaagggcaaagaacagaatacagagcgtagcttt
ttcctcagaatgaagtgcacactgaccagcaggggaaggacagtgaatataaagtctgca
acctggaaggtacttcattgcacagggcatgttcgagtgtatgatacctgcaataatcag
actcactgtggatataaaaagcctcctatgacatgcttggtgttgatctgcgtacctatt
cctcatccatcaaacattgaagtccctttggacagtaagacattcctcagtcgccacagc
ctggatatgaaattttcatattgtgatgaaagaattacagagctgatgggatacgaacca
gaagaactcttgggtcgctccatctatgaatactatcatgctctggactctgatcatctg
accaaaacacatcatgatatgtttgctaaagggcaagtgactacaggacagtacagaatg
cttgctaaacacggtggatatgtctgggttgaaactcaagcaactgttatatacagcact
aagaactcccagccacagtgcatagtgtgtgtaaactacgtcttgagtgaaattgtgcag
gaggagttattcttttcccttgggcaaactgagcgcgtgctgaagccagtggagtcggtt
gatatgaacatgaccaaaatattcagcaaggctgacctagaagattctaacagtctcttt
gaaaaactgaaaaaggaacctgatgctttaactttgcttgcgccagctcctggagacacg
attgtctctttagatttcgacagtaatgagtctgatgagcaacaatttgatgaagttcct
ttgtataatgatgtaatgctcccctcatccagtgagaaattgcagaatataaatttggca
atatcccccctgcctgcctctgaaactacaaagccacttcgtagcaatgctgaccctgca
ctcaatagagaagttgtatcaaagctggagtcaaatacagagccactagagcttgcattt
tccagtcggccgaggcaagaacagccatccagcccttctgatacaagcaccaaccaaagt
tcacctgagccccatagtcccaatgactattgctttgatgtggataatgacatggctaat
gagtttaagttggaattagtggaaaaactctttgcaatagacacagaagcgaaaaatcct
ttctctactcaggaaacggatttagatttggagatgttagctccttacatcccaatggat
gatgacttccagttacgatcctttgatcaaccacctccactggaaagtggttgtgctaac
tctcagaatgtggccagcaccgtatttcaccaaactcagacaatatctgctgctgctgag
gaaataataccagtgaaaacagagtgcatggatgatgttaaaactctaatagtttctcag
tctcctgtcctcgtaatcaatgaaatcgacagcaccccagcatcaccatatggtggaaat
cgaagtcgaactgcatctccaatcagagctggtaaaggaacattggagcagacagagaaa
tcttatccaggaacacccaatttgttaacagtcactttgagtaacagatctaatccagtg
gatgaagaactaaatccaaagatgctagctttgcataactctcagagaaagcgaaagatg
gaatatgatggctcactttttcaagcagtgggaattgggtctttattccagcagtcgggt
gattgtggaacgaatgcatcactttggaagcgtgtaaaaggatgcaaatctaatggccag
aatggagttggacaaaagacaatcatcttattatcaaccgatatagcaagtaaactccta
gggcagtcaatggatgagactggactaccacaacttaccagttatgattgcgaagtaaac
gctcccatacaaggcagcagaaacctgctacagggtgaagaattacttagagctctggat
caagttaactga
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