Pelodiscus sinensis (Chinese soft-shelled turtle): 102457760
Help
Entry
102457760 CDS
T02980
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04120
Ubiquitin mediated proteolysis
pss04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102457760 (SYVN1)
04120 Ubiquitin mediated proteolysis
102457760 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pss04121
]
102457760 (SYVN1)
Enzymes [BR:
pss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102457760 (SYVN1)
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102457760 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING-like
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
102457760
NCBI-ProteinID:
XP_006136642
Ensembl:
ENSPSIG00000006560
LinkDB
All DBs
Position
11:34572002..34600645
Genome browser
AA seq
652 aa
AA seq
DB search
MLELSYLPPRLKCIPSTLYSRWAGEMFRSAIMMAASLALTSAVVAHAYYLKHQFYPTVVY
LTKSSPSMAVLYIQAFVLVFLLGKFMGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVF
RDDFSPRFVALFTLLLFLKCFHWLAEDRVDFMERSPNISWLFHFRIASLMLLLGVLDFLF
VSHAYHSILTRGASVQLVFGFEYAILMTMVLTIFIKYILHSVDLQSENPWDNKAVYMLYT
ELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQFKRAVTDAIMSRRAIRNMNTL
YPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLR
ASLPTQSQTPPEQQEQAQQQPQPHQTPLIPQPPNFPQGILPPFPPGMFPLWPPIGPFPPV
PGVQPPNNAENPSAASSAPSTSGSQTTANTSRPGGDSASGADTAPVGTVPGFPFPPPWMG
MPLPPLFGFPPMPVPPAGFAGLTDEELRAMEGHERQHLEARLQCLQNIHTLLDAAMLQIN
QYLTILATIGSPRPTQLPTTLNTSTSSQETPTSESTTFNSPSSTSSPGTSATMEPDSTGQ
TDLSGLVGAEGYTAPAGHEEEEEQQPLPEEPDTAELRRRRLQKLESSSPPSH
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgctggagttgtcctatctgcctccaagattgaaatgtatcccaagcactttatatagt
cgttgggctggggagatgttccgatcagcaatcatgatggctgccagcctggctctgaca
tcagcagtagtggctcatgcctattatttgaagcatcagttctacccaacagtggtatac
ctgaccaaatccagccccagcatggcagttctctacattcaggctttcgttttggttttc
ctcctgggcaaattcatgggcaaagtgttttttggccagctccgagcagcagaaatggag
cacctacttgagagatcatggtatgcagtcacggaaacttgtctggccttcactgtcttc
agagatgacttcagtccccgttttgtggcccttttcaccctccttctcttcctcaagtgc
ttccactggcttgctgaggatcgggtggactttatggagaggagtccaaacatctcctgg
ctctttcatttccgcattgcctctctgatgctcttgttgggcgtcctggatttcctattt
gtcagccatgcctatcacagcatcctcacccggggagcctctgtccagctggtctttggg
tttgagtatgccatcctcatgactatggtgctcaccatcttcataaagtacattctacat
tcagtcgacctgcagagtgagaatccatgggacaacaaagctgtctacatgctgtacact
gagctcttcacaggcttcattaaagtgctgctgtacatggcgttcatgaccatcatgatc
aaagtgcacacgttccctctgtttgccatcagacccatgtatctggccatgaggcagttc
aagagagctgtgactgatgccatcatgtcacgccgtgccattcgcaatatgaacactcta
taccccgatgccactccagaagagcttcaggccatggataatgtgtgtattatctgtcgg
gaagagatggtgacaggtgctaaacgcctgccgtgcaaccacatattccacaccagctgc
ctgcgttcgtggttccagcggcaacaaacctgccccacttgccgcatggatgtcctccgt
gcttcccttcccactcagtcccagacgccgcccgagcagcaagagcaggcacagcagcag
ccccagccacaccaaactcccctgattccccagccacctaacttcccccaaggaatcctg
cccccatttcctcctgggatgtttcctctctggcctcccataggcccatttcctccagtg
cctggtgtccagccacccaacaatgctgagaatccttctgctgcttccagtgcaccttcc
acttcgggcagtcagacaacagcaaatacctcgagacctggtggtgattcagcctctgga
gcggatactgcccctgtaggaacagtgcctggctttcccttccctcccccatggatggga
atgccattgccacctttatttggtttccctcctatgcctgtgccacctgctgggtttgct
gggttgacagatgaagagctgcgtgccatggaaggccatgagcggcagcaccttgaagcc
aggctccagtgtctgcagaacattcacacactcctagatgcagccatgttgcagataaac
cagtatctcaccattttggcaactattggatcaccccgtcctacacagctgccaactacc
ctaaacacttcgacctcctctcaagagacacccaccagtgaatccaccactttcaattca
cccagcagtacctcttccccggggacatctgcaacaatggaaccagactcgacaggtcaa
acagatctatctggattggtgggtgcagagggatacacagcgccagctggacatgaggaa
gaagaggagcagcagcctttaccagaggagcctgacacagcagagcttcgcaggcgccgg
cttcagaaactggaatcttcttctcccccttcccattga
DBGET
integrated database retrieval system
