KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102458055
Entry
102458055         CDS       T02980                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein scribble homolog
  KO
K16175  protein scribble
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pss00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    102458055
SSDB
Motif
Pfam: PDZ PDZ_6 LRR_14 LRR_8 LRR_4 PDZ_2 LRR_13 LRR_9 LRR_LRWD1 SUIM_assoc
Other DBs
NCBI-GeneID: 102458055
NCBI-ProteinID: XP_025043340
LinkDB
Position
Unknown
AA seq 1875 aa
MSAGYSCLLLLTGFVPGCGCARPGVKCGFFSAGRPARLRCALHSPAWRRPFFRLLNLRKL
GLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPEGF
TQLRSLGHLALNDVSLQSLPSDIGNLANLVTLELRENLLKALPTSLSFLVKLEQLDLGGN
DLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEHLPNELSGLVA
LTDLLLSQNLLESIPDGIGQLKQLSILKVDQNRLVEVTESIGDCENLSELILTENVLTAL
PKSLGKLTKLTNLNVDRNRLTALPSEIGGCASLNVLSLRDNRLALLPPELANTTELHVLD
VAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQPSPSL
ENLLQNSVDESWTDTNLNRVSVIQFLDEPRADDEEEAGAEKRGLQRRATPHPSELKVMKK
VIEVRRNEMYSAKPDVNPDSPDSEEKRLSAMSSRSEDSHVSNSTVSANFREEEEVGAGGT
RPNGQVPEKQELESEMKPMAEEEQAVEPAVGHEEELEAEYNEPSVHFAEDTLVRSEEEDD
DDERPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLSSDGVPEEEERGGCSNS
VEPPEQEEAWDEDSVKDGALPTQPSVKGVSFDQANNLLIEPARIEEEELTLTILRQTGGL
GISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALHSAEHHVAVD
ALRGSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPREPRGGLRFPERPEGAPPTERF
STCLVRNEKGLGFSIAGGKGSTPYKAGDMGIFISRIAEGGAAHRDGTLRVGDRVISINGV
DMTEARHDQAVALLTASSPTIALLVEREGAEQLSEGDSPVAQRGRAHSPHHPRAHSPPPP
SSHGESPPEETALLQRDHLSKGLEDQYPIEEICLIKAGGPLGLSIVGGSDHSSHPFGIQE
PGVFISKVIPHGLASRSGLRVGDRILEVNTIDLRHATHQEAVNALLSSTQALSMLVRRDP
PPPGMQEICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLKV
GLRILEVNHQSLLGMTHTEAVQILRSVGDKLLVLVCDGFDPKAAAAIEMSPGIIANPFAA
GIGRKNSLESISSIDRDLTPEELEILQKEMEMVREATQWEREEMEKVNISSEPLRLDYRT
LAALPTNNFPRVTRAAPAGESGPGSSRCDASYSPSSQQPPAALRPAHLSGRETRFATINF
IPPQDESKPQTKPGSIQPLSWVRQNAAPPSSEGRDSPNPFQQPESSAGVQNTLRPHAPPS
PEDVPVNVKQAYKTFAAVPQSHSLLEPQANKVGVGQRRLPGCTDWGRGRQRKRGYWEHHR
SFPFLSPQEMHGHTSTEKPKASPEMLSPGGLHSPEQRSFRERQKYFEMEVKQQQVEKPPK
RVSLVGEDDLKKMKEEEARKLQQKRALLLEEEEEEEEEDAGKPDMSMQSSVIIEGVEYKI
KRLNGRSIQSPATRESEADEHSSSQRNSLEDGFKLEQRPNSMSGLIPVYPGGEAGAPVRT
AKAERRHQERLRMQSPEFLSTQEKELSPAERRALEAEKRAMWRAARSSTLEDSIKQYEQE
LARKLYQSRQWAPAPGARPAQVSSPVQSHGSRTPGSGSQSRMKSLEQDALKAQMVIAKSK
EGKKRSTLEQLAESPSPAPTPSPTLPEDCSPRNVTSPGRLSMSEKKFDYREFAAIPSSKP
VYEIQSPEAVDSLRYVDDTNSTGPQEPDGPAEEEGLLVTHDSSTPTTSALEEMALYSSKR
KLRHSRRSLEAAVPT
NT seq 5628 nt   +upstreamnt  +downstreamnt
atgtccgcagggtattcatgtttacttttactcacggggtttgtgcctggctgcggctgc
gcaaggcctggggtcaaatgtggctttttttctgcaggccggccagcgcgcctgcgctgt
gctctccattcccccgcctggaggaggcctttcttccggctcctgaacctgcgcaagctg
ggcctgagtgacaatgagattcagagacttccccctgaggtggccaacttcatgcagctg
gtagagctagacatctctcgcaatgacattccggaaatccctgaaagcatcaaattctgc
aaatccctggagattgctgacttcagtgggaatccgctttccaggcttcctgagggcttc
acccagctgcggagcctgggccacctggccctgaatgatgtgtccctgcagagcctcccc
agtgatatcgggaatttggccaatctggtgactctggagctgcgtgagaatctgctcaag
gccctccccacttcgctctcgttccttgtcaagttagagcagttggatcttggtggcaat
gacttggaagtgctgccggacactctgggagcattgccgaacctgcgggagctctggcta
gaccgaaaccagctgtcggccctgcccccggagctagggaacctgcggcgtttggtctgt
ctagacgtgtctgagaacaagctggagcacctgcccaatgagctcagtgggctggtggca
ttgacagacctcctgctgtctcagaacctgctggaaagcattcctgatgggattgggcag
ctgaagcagctctccatcctaaaggtggatcagaatcggctggtggaggtgacagagtcg
ataggggactgtgagaatctctcggagctcatcctgactgagaacgtacttaccgccttg
ccaaagtccctggggaagctgaccaagctgaccaatttgaatgtggaccggaaccggctg
acggcacttccctcggagattggggggtgtgccagtctgaatgtgctgtccctgcgggac
aaccgcctggcacttctgcctcccgaactcgccaacactacggagctccatgtgctggat
gtggcagggaacaggctgcagaacttgccctttgctctgacaaatctgaacctgaaggca
ctatggctggcagagaaccaatcccagccaatgctgaaattccagacagaagatgatgag
aagacgggcgaaaaggttctcacctgttacctgctgccccagcagccatcacccagtctc
gaaaatctcctgcagaacagcgtggatgagagctggacagacaccaacttgaaccgggtc
agcgttatccagttcttggatgagcccagagcagatgacgaggaggaggctggagctgag
aaaaggggcttgcagcgcagagcaacccctcaccccagtgagctgaaggtcatgaagaaa
gtgattgaagttcggcgcaacgagatgtactctgcaaagcccgatgtgaacccggattct
cccgactcagaggagaagcggctgagcgccatgtccagtcgcagcgaggactcgcatgtc
tccaacagcaccgtctctgccaacttcagggaggaggaggaggtgggggcagggggcacc
aggccgaatggacaagtgcctgaaaagcaggagctggagagcgagatgaagcccatggct
gaggaggagcaggcagtggagccggcagttggtcacgaggaggagctggaggcggagtac
aatgagccctccgtgcattttgcggaggacaccctggtccggagcgaggaggaggacgac
gacgacgagcggcccttccccgtggagaagcagcggctgatccgcaaggacaccccacac
tataagaaacactttaagatcaccaagctgcccaagccagaggcagtggtggcgctcctg
caggggctgagcagtgacggggtgccggaggaggaggagcgggggggctgcagtaacagt
gtggagcccccagagcaggaggaggcctgggacgaggacagtgtgaaggacggagccttg
cccacgcagccgtcagtcaagggggtgtcgtttgatcaagccaataatctgctgattgag
cctgctcgcattgaggaggaagagctgactctgactatcctgcggcagacaggggggctg
ggcatcagcatcgcagggggaaaaggctcaactccatacaagggcgacgacgagggcatc
tttatttcccgtgtgtcagaggagggccctgcagcccgagcaggagtccgtgttggggac
aagctcctggaggtgaacggcgtggccctgcactctgcggagcaccacgtggccgtagac
gcgctgcgtggctcagggagctcggtctccatgacggtccttcgggagcgtatggtggaa
cctgagaacgccatcacggttacacccctgcgtcctgaggatgactacagccctcgagag
ccgcggggcggcctgcgctttccagagcggcccgagggggcgccgcccaccgagcgattc
tccacctgccttgtgcgcaacgagaaagggctgggcttcagcattgccggcggcaagggc
tccacgccctacaaggcgggtgacatgggaatctttatctcgcggatcgcagaggggggt
gcggcccatcgggacgggaccctgcgcgttggagaccgggtcatctcgatcaatggggta
gacatgacagaagccaggcatgatcaggcagtagcactgcttaccgcatcctcccccacc
atcgcgctgctggtagagagagagggtgcagagcagctcagcgagggagactcgcctgtg
gcgcagcgagggcgcgcacactccccacaccaccctcgcgcacactccccaccacccccc
tccagccatggcgagagcccgccggaggagacggctctgctgcaaagggaccatctgtcc
aaaggcctggaggaccagtaccccatcgaggagatctgtctgatcaaagctggggggccc
ttggggctcagcattgttggaggcagcgaccactcgagccacccatttgggattcaggag
ccaggtgtctttatctcaaaggtcattccacatgggctggcatcccgcagtggcctgcga
gtgggggacaggatcctggaggttaacaccattgacctgcgccatgctacccaccaggag
gctgtgaacgccctgctgtccagcacacaggcgctgagcatgctggtgagacgagaccca
ccgccccctggcatgcaggagatctgcattgagaaggctcctggggaaaagctgggcatc
agcattcgggggggagcgaaaggtcatgctgggaacccctttgaccccaccgatgagggc
atcttcatctccaaggtgagctcctctggggctgctgcccgggatggccggctgaaggtg
gggcttcggatcctggaggtgaatcaccagagcctgctgggaatgacgcacactgaggct
gtgcagatcctacgcagtgtgggtgacaagctccttgtgcttgtgtgtgatggctttgac
cccaaggccgcagctgcaatcgagatgtccccaggaatcattgccaatccctttgcagct
ggcatcgggcgcaagaacagcctggagagcatctcctccattgaccgtgacctgacccca
gaggagctggagatcctacaaaaggagatggagatggtgagggaggcgactcagtgggag
agagaagaaatggagaaagtgaacatcagcagtgagcccttgcgattggactatcggacc
ctggcggctttgcccacaaacaacttcccaagagtcacccgtgctgctccagcaggcgag
tcaggccctgggagctccaggtgcgatgcctcttactcaccaagcagccaacagccacct
gcagcccttcggcctgctcatctgtcaggcagggagactcgctttgcaacaataaacttc
atcccaccacaggatgagagcaaaccacagaccaagccaggcagcatccagcctctctcc
tgggtgcgacagaatgcggccccacctagttcggagggcagggacagccccaaccccttc
cagcaacctgagtcatctgccggtgtccagaacactctgcgtccccacgcacccccctct
cctgaggatgtcccagtcaatgtcaagcaggcatacaagacctttgcagcagtgccccag
tcacattctctccttgagccacaggccaataaggtaggggtgggacagagacgattacct
ggctgcacagactggggacggggcaggcagagaaaacggggatactgggagcatcacaga
agtttcccttttctctctcctcaggagatgcatggtcatacaagcactgagaaacctaaa
gcttctcctgagatgctgtcacctgggggactgcacagcccagagcagcgatccttccgc
gagaggcaaaagtactttgagatggaagtgaagcagcagcaggtggagaagccacccaag
cgtgtctccctggtgggggaggatgacctgaagaaaatgaaggaggaggaagctcgtaaa
ctgcagcagaaacgggccctattactggaggaggaggaggaggaagaagaggaggatgca
gggaagcccgatatgagcatgcagtccagcgtcatcatcgaaggagtggaatacaagatc
aagaggctaaatggaaggagcattcagtccccagcaactcgggaatccgaggcagacgag
cacagcagctcccagagaaactcgctagaggacggattcaagctggagcagagacctaac
tccatgtctggactgatcccagtgtacccagggggcgaggcaggggcaccggtgcgaaca
gccaaagctgagcgacggcaccaggagcgattgcggatgcagagccctgagttcctgagt
acccaggagaaggagctgtctccagctgagcgccgggccctggaggcagagaaacgagcc
atgtggagggcagcacgatcctccactcttgaagacagtattaaacagtacgagcaggag
ctggccaggaagctctaccagtcccgacagtgggcacctgcaccaggggccaggccagct
caggtgtctagcccagtgcagagtcacggctcaaggacccctgggtcaggaagtcaatcc
aggatgaagtctctggagcaggatgccctcaaagcccagatggtgattgccaagtccaag
gaggggaagaagcgcagcactctggaacagctggctgaatctccttcacctgctcccact
ccctccccaacgctgccagaagactgcagccccaggaatgtcacttcaccagggaggctg
tccatgtctgaaaagaagtttgactaccgggaatttgctgctattccttcttccaaacct
gtttatgaaatccagtcaccagaagcagttgacagtctccgctatgtggatgacacaaat
agcacaggtccccaggagccagatggaccagcagaggaagaggggctgttagtaacacac
gactcctcaacacctaccacatcagcacttgaagaaatggctctgtacagcagcaagcgc
aaactccgacacagccgtcgaagtctggaggctgctgtccccacataa

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