Pelodiscus sinensis (Chinese soft-shelled turtle): 102458112
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Entry
102458112 CDS
T02980
Symbol
TP53BP1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102458112 (TP53BP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
Tudor_5
DUF4537
SH3_Hsr9
RTT107_BRCT_5
Tudor_2
Motif
Other DBs
NCBI-GeneID:
102458112
NCBI-ProteinID:
XP_075773072
Ensembl:
ENSPSIG00000009348
LinkDB
All DBs
Position
Unknown
AA seq
1916 aa
AA seq
DB search
MEPRHSPLEAGFSQQDSPRLVVEDSQPEEAAAHGCLGLRLPGQGPAQGPREEQEPPRAAA
CLAQRAGAGPGGGDGGAEEKQRADPMDSSTDLDTTGSLSQVIDRLPKPTSKNRVLGMVAA
AAEDAGEDAGCCTTHLLSAEDSGTSQLGFGALELSQSQDFEGHSTLSEEGTGHQLQPVGT
VLTSSNPMRNDSNEELHVVESGTLYLGESYTGAQQGKSERSEVMSSSPRIPQQHKEISRI
QMSVCGGLESGLRAEKSPDPGLQESEIVSTQEDMFAQSHTTASESDCIITREEGSVACTP
ADTLHLLHLSGQRSLGQESISISSSLVTPSPDAFGSHPLIIPSSPTEQEEAKDEQMDNSA
PAEGGDLQREEQRGEEPVEIGNPPVPAGLQVLPQASTPVSRSAPAFVPGSILLPSQPEFS
HDIFIPTPSLEERPSREEKGGFLLGSCVPADVSETTAAQPQIPTRDPVLSCKLLFSESGC
SQPTKIEDNTSSLKTNHDSENTQTEMDSTLQAVELKPCSTESYNMQLRLSEDSQALLSEN
SEKPNWEAVRASREPTICPVAEGAAAEGSVVQMACIDLTGDSGSQISATLSVQFETSSCL
LGQEALTEVKENLSGEKSEYEAVPETLCEVQGGERHEDQEVMGVESSEIFEKNSEKQCDP
SQGLVQMDPEIRKKDTVKDSTVVAEVISTMDLSLKAAPDDVPKLSDVPRQPFLGESLQQQ
DGSWPQVKVNAAPRLASCAKKCPSTQENRSQAESDVELKQIQKDQQPSPATLGREDELSA
TPQESPLMPLEKAADIVKKTLRISNLEQEEERTSEQSPCPSSGTLFHFTLPKESDVIQPL
TSVTPSLIGQLKMGPRRHSTPIVDGSCPESTIVTSDVTAEGSIGTNNVTVESAMASADAL
EECEKGDSGAAPEADGKLCLRMNLATPVNEESEESLPFSLEKPAASERKNGSSAVASSQK
NLSVFSRVCEVRREDEARGHDLSASPFRGNLFSFPSTQEEQLHEDPDTWQQCQKQVSCGG
IKVSQPAEQDSKHQPSYTKDGEVMEVDIERDQEKEGKNTQEKLCKALAAQEREKGEQMWT
GTSNKEVQTAGASLLAPAAVSAATQTMKGVSSQVEVGTSMAEQRPGQQDAKVQTEESGEK
LANAPGNDTEPLHSQGEEEFNLPPQSQSRVQHRHMRTIREVRTVVTRIITDVYYVDGAEV
ERKVTEETEEPTVECQECETDLSPSRTTGGSSLTSGDLGDISSFSSKASSLHRTSSGTSS
GLSATHGGSSSGRGAGSFKGKVGGMEAGEFALPSGRGLLGKLSPRKGAGQPGSPLRASHI
GAMAFEEDEDVALGIRQGGKVLLTPRGRGRRGRPPSRTTGTRDAAGSGMAAVEDLSATAS
PEEKPFVRIVVRPPDGGDRFDAAGPCTLRRSDSPEIPLQTVAGPSDSADLSSGNSFVGLR
VVAKWSSNGYFYSGTITQDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLETEVTALSED
EYFSAGVVKGHRKESGELYYCIEKEGQRKWYKRMAVILSLEQGNKLREQYGLSPYEPVTP
LTKAADISLDNLVEGKRKRRSNFGSPSTSSSSTTPTRKGLESPRVTPGLLSGKRKLVSSE
DERSPAKRGRKSTAMKPGAVRAGEFLSPCESGDHTGDPSTLEEHHGPLPRNKTLFLGYAF
LLTMATPSDKLANCQKRSAGPAGSSEEEEEFSIPYNKQYTILQLRTGAGYILEDFNETQC
NAAYQCLLIADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLQE
QRLLEWHPRVSPFRNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHYSNDQNKDISLGV
FDVVVTDSSCPAAVLKCAEALRLPVVSQEWVIQSLVAGERVGYNKHPKYKHDYDPC
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcgccacagcccgctcgaggccggcttctcccagcaggactcgccgcgcctg
gtggtggaggactcgcagccggaggaggccgctgcccatggctgcctcggcctgcgcctg
cccggccagggccccgcgcaggggcctcgtgaggagcaggagccgccgcgagccgccgcc
tgcctggcgcagcgggccggggccgggcccggaggaggcgacgggggcgccgaggagaag
cagcgcgcagatcccatggacagttctaccgatctagacacgactggttcactcagccaa
gttattgatcggttgcctaagcctacaagtaagaacagagttcttgggatggtggcagct
gctgctgaggatgcaggtgaggatgcgggatgctgcactacccacttgctgagtgctgaa
gactctggcacatcacagttgggttttggagctctggagctctcacaaagccaggacttt
gagggacactcaacactgagtgaagagggcacagggcaccagcttcagccagtgggcact
gtccttacctcttctaatcccatgaggaatgactctaatgaggagctgcatgtagttgag
agtggaactctgtaccttggagaaagttacactggtgcacagcaagggaagtctgaaagg
tcagaggttatgtctagctctcccagaattccacagcaacacaaagagatcagcaggata
caaatgtctgtctgcggtgggcttgaaagtgggttgcgggctgagaagtcgcctgatcct
ggtctgcaggagtcagagattgtgtcaactcaggaagatatgtttgctcagagccacaca
acagcttcagagagtgactgtatcataaccagagaggaaggttccgtggcatgcacccct
gctgacactctgcacctcctgcatctctctgggcagaggtcccttggtcaggagagtatt
tccatttcttcaagcctagttactccttctcctgatgcctttggatcccatcctcttatc
atccccagcagtcccacagaacaggaagaagcgaaagatgagcagatggataattctgct
ccagcagaaggaggagaccttcaacgggaggagcagagaggagaagagccagtggagatt
ggtaatccacctgtcccagcaggacttcaagttctaccgcaggcctcaactcctgtatcc
cggagtgccccagcctttgttcctggatccatccttttgccatcgcaaccagaattttcc
catgatatcttcattccaactccaagtctggaggagaggcctagtagagaagagaaaggg
ggatttttattgggatcatgtgtgccagcagatgtctctgaaaccacagcagctcagcca
cagatccccacaagagatcctgtattgtcctgtaagctattattctctgaaagtggatgc
agccagcccacaaagatagaagacaacacaagctctctgaaaaccaaccatgacagtgaa
aacacgcagactgagatggattctacactacaagctgtagagctgaaaccctgttctaca
gaaagttacaacatgcaactgaggctaagtgaggacagccaggccctgctcagtgagaac
agtgagaagccaaactgggaggctgtgcgtgcttccagagaacctaccatttgtcctgtt
gctgaaggtgcagcagcagaaggctctgtagtacagatggcttgcattgatcttacaggt
gattctggaagccagatatctgcaactctgtctgttcagtttgagacttcatcatgcttg
ttgggccaagaagcactgactgaggtcaaggaaaacctgtcaggagaaaagtctgagtat
gaagcagtccctgagactctctgtgaggttcaaggaggagaaaggcatgaagaccaggaa
gtgatgggagtagaatccagtgagatttttgaaaaaaattcagaaaaacaatgtgaccca
agccaggggttggtacagatggatccagagatcaggaaaaaagataccgtgaaggattct
actgtggttgctgaagttataagcacgatggatctgtcactgaaggctgctccagatgat
gtgccaaagctcagtgatgttccccgtcagccttttctgggagagtcattgcaacaacag
gatggctcgtggccccaggtaaaggtaaatgctgccccacgcttggcttcatgtgccaaa
aaatgtcctagtactcaagagaacaggagtcaagctgaaagtgacgtagaattgaagcaa
atccagaaggatcagcagccttctccagctactttaggaagagaggatgagctgtcagca
acaccacaggagtcacctctgatgcccttagagaaggcagcagatatagttaaaaaaaca
ttaaggattagtaatctggagcaagaagaggagaggacgtctgaacaatccccctgtcca
tccagtggaactctgtttcatttcactttgccaaaggaaagtgatgtcattcagcccttg
accagtgtgaccccatctcttattgggcagcttaaaatgggacccagaagacacagcact
cctattgtggatggcagctgcccagagagcaccatagtaaccagcgatgtcacagcagag
ggcagtattgggaccaataatgtcactgtggaaagtgctatggcatcagcagatgcgttg
gaagaatgtgaaaaaggggattctggtgcagctcctgaggctgatggaaaactgtgtctt
cgaatgaaccttgctacccctgtgaatgaggagagtgaggagagtctgcccttcagtctg
gaaaagcctgcagccagtgaaaggaaaaatggatcctctgctgttgccagctctcagaag
aacctgtctgtgtttagtcgtgtctgtgaagtccgtcgagaagatgaggccagaggtcat
gatctttctgcttctccatttagggggaacctgtttagttttccaagcacacaggaggag
cagctgcatgaagatcctgacacttggcagcagtgccagaagcaggtctcttgtggggga
attaaagtttctcagcctgcagaacaggactccaaacatcagccatcctacacaaaagac
ggagaggttatggaagttgatattgaaagggatcaggaaaaggaagggaagaacacacag
gagaagctgtgtaaggctttggcagcccaggaaagggagaaaggtgagcagatgtggact
ggtacaagcaacaaagaggtccagactgcaggagcttctctcttggcccctgcagctgtg
tcagcagcaacacagacaatgaagggagtgagcagccaggtagaagtgggaacgagcatg
gctgagcaaaggcctggacaacaggatgccaaggtccaaactgaagagagtggagagaag
cttgcaaatgcccctggaaatgacactgagcctctccatagccagggagaggaggagttt
aacctgcccccgcaatcccaaagccgcgttcagcatcgccacatgcgaaccatccgtgaa
gtgcgcacagtggtcacacgtattattacagatgtttactacgttgatggtgctgaggta
gagcggaaggtgactgaggagactgaagagcctacagtggagtgccaggaatgtgagaca
gacctctccccctcccgaacgacagggggctcatcactgacctccggggacctcggggac
atcagctccttttcatccaaggcctccagtctccatcgcacatcgagtggcaccagtagt
ggtctatcagctacacatggtggcagtagctcagggaggggagcaggatctttcaaaggg
aaagtcggtggaatggaagctggagaatttgccttacccagtggcagaggactgctagga
aaactgagccctagaaaaggggctggccagccagggtcacctctaagagccagtcacata
ggagcaatggcattcgaggaagatgaagatgtagcacttggcatccgacagggtgggaaa
gtactacttacacctcgtgggcgagggagaagaggccgcccaccatctcgaacaactgga
acaagggatgcagctgggagtggcatggcagctgtggaagatctctcagccacagcatca
cccgaggagaaaccctttgtgcgcattgtggttcgaccaccagatggtggggacagattt
gatgctgccggcccttgcaccttgcgacgaagtgactctccggaaattcccttgcagacg
gtggctggtccctctgacagcgcagacttatcctctgggaacagctttgtgggcctgcga
gttgtagccaagtggtcctcaaatggctacttttattctgggacgatcacccaggatgtt
ggggcagggaagtacaagctgctttttgatgatggatatgagtgtgatgtcttaggcaaa
gatattttactctgcgatcccattcccctggaaactgaggtgactgcgctctctgaggat
gagtatttcagtgcaggtgtggtgaagggacacaggaaggaatctggagagctgtattac
tgtattgaaaaggaaggccaaaggaaatggtacaagcgtatggcagtaatcctgtccttg
gagcaaggaaacaagcttcgggagcagtatgggctgagtccctatgaaccagtcacaccc
ctgactaaggcagctgacatcagcctggataacttggtggaggggaagcggaagcggcgc
agtaactttggctcacctagcacttccagcagcagcactacacccactcgcaagggactg
gagagtccacgtgtcaccccaggtcttctgtctgggaagaggaagttagtttcctctgaa
gatgagagatccccagccaaacgaggacgcaagtctacagcaatgaaaccaggggctgtg
agggccggtgagtttttgagcccctgtgaaagtggagatcacacaggagacccctcgacg
ctggaggagcatcatgggccattgccccgcaataagaccctctttctgggttacgctttt
cttctcactatggcaaccccgagtgacaaactggctaattgccagaagcgatcagctggt
cctgcaggcagtagtgaggaagaggaagaattctcaattccttacaacaaacagtacaca
atattgcagctgcgaactggagctggctacatcctggaggacttcaatgaaacccagtgt
aatgcggcgtatcagtgtctcctgattgcagatcagcactgccgaacccggaaatacttc
ctgtgccttgccagtggaattccctgtgtatctcatgtctgggtccatgacagttgccat
gcaaaccagcttcagaactaccggaattaccttctcccagctggctacagcctccaagag
caaaggctgctggagtggcatccccgagtgagccccttccgtaacctgaaggttcttctg
gtatcagaccaacagcagaacttccttgagctttggtcagaaatcctcatgaccggggga
gcagcatcagttaaacaacattactcgaatgaccagaacaaagatatttctttgggtgtg
tttgacgtggtggtgactgactcgtcctgcccagctgctgtcctgaagtgtgcagaagca
ttacggctccctgttgtgtcacaggagtgggttattcagagccttgttgctggggagaga
gttggctacaacaagcatccaaaatataaacatgactatgacccctgctaa
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integrated database retrieval system
