KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102458538
Entry
102458538         CDS       T02980                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102458538 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pss03041]
    102458538 (SF3A1)
Spliceosome [BR:pss03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102458538 (SF3A1)
 Complex B
    102458538 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    102458538 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2
Other DBs
NCBI-GeneID: 102458538
NCBI-ProteinID: XP_006128005
LinkDB
Position
Unknown
AA seq 787 aa
MSYLMNKQIRKTSRLFFLQPEDEPKEEAATPAKPVVGIIYPPPEVRNIVDKTASFVARNG
PEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQSAQ
QQLPQKVQAQVIQETVIPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQL
MQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKLKKEAENPREVLDQVCY
RVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPGEQGNFPPPTTPEELG
ARILIQERYEKFGESEEVEMEVESDDEDEKQEKTDETPSQLDQDTRVQDMDEGSDDEDES
QKVPPPPDTPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPASKM
QEHMRIGLLDPRWLEQRDRSIREKQTDDEVYAPGLDIESSLKQLAERRTDIFGVEETAIG
KKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKEKI
GPSKPNEMPQPPPSSVPNPPPISPSIAAVPRPPSVSIPPANGGFIAAETVLNSPPXTSVL
RTPPGSVITGPMPPIIHAPRINVVPMPPSGPPMMAPRPPPMIVPTAFVPAPPVAPVPAPA
PMPPHPPPPMEDEPMSKKPKSEDSLMPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLSGQV
LVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMINGAVIHLALK
ERGGRKK
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgtcatacctcatgaataaacagatccggaaaacctctcgtttgttcttcctgcagcca
gaagatgagccaaaagaagaagcagcaacaccagccaaacccgttgtggggattatttac
cctcctccagaagtcaggaatatcgtggacaagacagccagctttgtagcgagaaatggc
ccagagtttgaagctcgaatccgtcagaacgaaataaacaaccccaagttcaatttcttg
aaccccaacgatccctaccatgcctactaccggcacaaagtcagcgagttcaaagagggc
aaggcccaggaaccctcggctgccataccgaaggtcatgcaacagcagcaaagtgcgcag
caacaacttcctcagaaggtccaggctcaggtgatccaagaaacagtcattccaaaggaa
cctccaccagagtttgagttcatcgccgaccctccctccatctcagccttcgacttggac
gtggtgaagctgacggcgcagttcgtcgcacggaatggccggcagttcctgactcaactg
atgcagaaggaacagcggaattaccagtttgacttcctgcgtccgcaacatagcctcttc
aactacttcaccaaactggttgagcagtacaccaagatcttgatcccgcctaaagggcta
cttatcaaactcaagaaggaggctgaaaatcctcgagaagtcctcgatcaggtgtgctac
cgagtggagtgggccaaattccaggaacgagagaggaagaaggaagaggaggagaaagag
aaggagcgtgtcgcttatgctcagattgactggcatgactttgtcgtggtggaaaccgtg
gacttccagcccggcgagcaaggaaacttccctcctcccaccacgcccgaggaactgggc
gctcgcatactgatccaggagcgctacgagaagtttggggaaagcgaggaggtggagatg
gaggtggagtcagatgacgaagacgaaaagcaagagaagaccgacgagaccccctctcaa
ctagaccaagacacgcgagtgcaggatatggacgagggttccgatgacgaagacgagagt
caaaaagtcccgcctccgccggacaccccaatgccgcctcctctgcctccaactccggac
caggtcattgtgcggaaggattacgatcccaaagcctccaagccgttaccacctgcgcca
gccccggatgaatatctcgtctctcccatcacgggcgagaagatacctgccagtaaaatg
caagagcacatgcgaatcggactcctggatccccgttggctggaacagagggatcggtct
atccgggagaaacagactgacgacgaggtctatgccccaggtttggatatcgagagcagc
ctgaagcagctggctgagcgccgtacggatatcttcggtgtggaggagacggcgatcggg
aagaagattggcgaagaggagatccagaagccagaggaaaaggtgacctgggatggccac
tcgggcagcatggctcgcacgcagcaggccgcgcaggccaacatcaccctgcaagaacag
atcgaagccattcacaaggccaaggggttggtgccggaagacgacagcaaagagaagatc
ggtcccagcaagcccaatgagatgcctcagccgccaccttcctcggtgcccaatcccccg
ccgatctctccttcaatcgcagctgtgccgcgcccgccgtcagtaagcattcctcctgcc
aacgggggtttcatcgccgcggaaacggttctcaacagtccaccnnngacgtcggtgctc
cggacccctcccggctcggtcatcaccggccccatgcccccgatcatccacgccccgcgc
atcaatgttgtcccgatgcccccatccggaccccccatgatggcccctcgcccgcctccc
atgatagtcccaacagcctttgtccccgcccctccggtggctccggtccctgccccggcg
ccgatgccgcctcaccccccgccacccatggaggacgagcctatgtctaagaaaccgaaa
agcgaggacagtctgatgccggaggaggagttcctgcgccggaacaagggtccggtcacc
gttaaagtccaggtgcccaacatgcaggacaagaccgaatggaagctgagtgggcaggtc
cttgtgttcacccttccgctctccgatcaggtctccgtgataaaggttaagatccacgag
gccaccgggatgccggcggggaaacagaagctgcaatacgagggcattttcatcaaggat
tccaactctctggcgtactacaacatgataaacggcgccgtgatccacttggcgctcaaa
gaaagaggcggccggaagaagtag

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