Pelodiscus sinensis (Chinese soft-shelled turtle): 102458825
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Entry
102458825 CDS
T02980
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102458825 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pss04121
]
102458825 (TRIP12)
Enzymes [BR:
pss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102458825 (TRIP12)
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
HECT type E3
102458825 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
102458825
NCBI-ProteinID:
XP_006119939
Ensembl:
ENSPSIG00000010747
LinkDB
All DBs
Position
Unknown
AA seq
2066 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDTVGGRSHLGQAKHKAHSPPESKKSISKAPKVQ
SNTTSEQSRGHFSKRGCSSSAIIIPQEDPDRVSTSEKQRTGQVPKKDHSRGVKRSASPDY
NRTNSPSSAKKPKALQYTETFSETNKPHTKSKKRHLDQEQQLKSAQLPSTSKAHTRKGGA
TGSSRSQKRKRTESSSCIKSGTAVDSTGVEERSAKPSKLASKSATSAKAGCSNITDSSSS
ASTSSSSSAVASASSTVPQGARVKQGKDQSKARRSRSASSPSPRRSSRDKEQSKTGGSSK
FDWAARFSPKVSLPKTKLSLPGSSKSEASKPGPSGLQAKLASLRKSTKKRSESPPAELPS
LRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDETPQG
AAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGS
GASSKAQQLLQGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEH
NFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRH
SKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTH
QDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVR
MFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGNCQEQIDLVPRSPQELYELTSLICE
LMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLVNTNTSGHSELKKDDARAQLMKE
DPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSH
IASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKA
CTNGSGTLGTTTTISTGTATSASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPAR
TAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCTA
TEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRL
KRFLHVFFSSPPPEEEPVGRLEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTG
SSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRG
YGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQF
SLQAEEERESTDDESNPLGRAGIWTKTHTIWYKPVREDEDGNKDCVGGKRGRAQTAPTKT
SPRNSKKHDELWHDGVCPSVSNPLEAYLVFTPPENITFEDPSLDVILLLRVLHAISRYWY
YLYENAVCKEIIPTTEFINSKLTAKANRQLQDPLVIMTGNIPIWLTELGKTCPFFFPFDT
RQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVM
QDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGNQEG
TKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWM
LRQETSLTSHDLFNIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLNMNGCS
VEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFE
SVFPLSHLQYFYPEELDQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSF
DSEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLP
DYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6201 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccaaccacaagacgacacagtgggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtaaaaaatctatttcaaaggcacccaaagtgcaa
tctaatactacttctgagcagtccaggggacacttttctaaaagaggctgtagttcatct
gcaattataataccacaagaagacccagaccgagtcagtacttcagaaaagcaaagaacg
gggcaggtgcctaagaaagaccattctcgaggagtaaaacgcagtgctagcccagattat
aacaggaccaattcccctagctctgctaaaaaacccaaagcacttcaatatactgaaact
ttttcagaaacaaacaagccacatactaaatctaagaaaagacacttagaccaagaacag
cagttgaaatctgcacaattgccatcaacgagcaaggctcataccagaaagggtggagct
accggtagctcccgaagtcagaaaaggaaaaggacagagagttcatcttgtataaagagt
ggtacagcagttgattcaactggtgttgaagagaggtctgcaaaacccagcaaactggct
tcaaaatcagcgacctcagccaaagctgggtgtagcaacatcactgattcttcttcttca
gcttctacatcctcctcctcttctgctgttgcttctgcttcttccactgttcctcagggt
gccagagttaaacaaggaaaagaccagagcaaggcaaggcgttctcgttctgcatctagt
cctagtcccagaaggagtagcagagataaagaacagagtaaaacaggtggctcttcgaag
tttgactgggctgctcgcttcagcccaaaagttagcctgcctaaaacaaaactgtctcta
ccaggctcttcaaagtcagaggcatcaaaacctggaccttcaggattacaggctaaacta
gcaagcttaagaaaatctacaaagaagcgcagtgaatcaccacctgcagagctccccagt
ttgcggcggagcacacggcaaaagaccacgggctcctgtgctagtaccagtcggcgaggc
tctggcctgggcaaaagaggagcagctgaagctcgccgacaggaaaaaatggctgatcct
gataacaaccaggacggagttaattcttcagctgcacgtacagatgagactccacaagga
gcagcagcatctagttctgttgcgggggctgtcggcatgacaacatctggagaaagtgag
tcagatgattctgagatgggaagactacaagctcttctagaagcgaggggtcttcctcct
cacttatttggccctcttggtcctcgtatgtcacagcttttccacaggacaattggaagt
ggagctagttctaaagcccaacagcttcttcaggggctccaagccactgatgaaagtcag
cagctacaggcagtaattgagatgtgtcagttgttggtcatggggaatgaagaaacatta
ggtggatttccagtcaagagtgttgtaccagctttgataacgttgctacagatggagcac
aactttgatattatgaaccatgcttgtcgagccttaacctacatgatggaagcacttccc
agatcatctgctgtagtggtagatgcaattcctgtcttcttggaaaagctgcaagttatt
cagtgtattgatgtggcagagcaggcactgactgccctggagatgttatcacgtagacac
agtaaagctattcttcaggcaggtgggttggcagactgtctgctgtatctggagttcttc
agcataaatgcccagaggaatgcactagctattgctgccaactgctgccagagcatcaca
cctgatgagtttcactttgttgcagattctctgccactgcttacacaaaggctaacccat
caggacaaaaaatcagtagaaagcacttgtctctgttttgcacggctagtggacaacttc
caacatgaggagaatttgcttcagcaggttgcctctaaggatttgctcacaaatattcag
caactcttggtagtgactcctcccatcctgagctcaggaatgttcatcatggtggtgcgc
atgttttccttaatgtgctccaattgtcctacgctagcagttcaacttatgaagcaaaat
attgcagaaacacttcacttccttctttgtggagcctcaaatgggaattgtcaagaacaa
attgatcttgttccacgaagtcctcaagaactttatgagcttacttctctcatatgtgaa
ctgatgccttgtctgcctaaagaaggaatctttgctgttgatactatgctaaagaaagga
aatgcacaaaacacagatggggcgatttggcagtggagagatgacaggggtctgtggcat
ccctataacaggattgatagccggataattgaggcagctcatcaggttggggaggatgag
ataagtctgtctacactggggcgtgtttatactattgacttcaattctatgcagcaaatc
aacgaagacactgggacagcacgtgccattcagagaaaacctaacccattagtcaatact
aatactagtggacattcagaattaaagaaggatgatgctcgagcacagctaatgaaagag
gacccagaactggctaaatcctttattaaaacattgtttggtgttctttatgaagtgtac
agctcttcagctggacccgctgttagacacaagtgccttagagcaattcttaggataatt
tattttgctgatgctgaacttctgaaagatgtactgaaaaatcatgctgtttcaagtcat
attgcctccatgctgtcaagtcaagacctaaagatagtagttggagccctgcagatggca
gagatcttaatgcaaaaattgcctgacatttttagtgtttacttcagaagagaaggggtg
atgcaccaagtgaaaaatctagcagagtctgaggctttgctgaccagtccaccaaaagca
tgcactaatggatcaggaacgctgggtaccactacaacaataagcactggaacagccaca
tctgccagtaatgcagctgcagatttggggtctcctagcttacaacacagccgggaagac
tctctagacctgagcccacagggccgactaagtgatgttttaaaaagaaaacgactgcca
aaacgtggacccagaaggccaaagtattcacctccaagagatgatgacaaagtagacaat
caagcaaaaagccctacaactactcagtctcctaaatcttccttcttggcaagcttgaac
cctaaaacttgggggagattaagcacacaatccaatagcaacaacattgaaccagcacgc
acagcaggagtcagtggtcttgcaagggctgcttcaaaggacaccatatccaacaacaga
gagaaaattaagggttggattaaggaacaagcccataaatttgtagagcgttattttagc
tctgagaacatggatggaagcaatcctgcactaaatgtattgcagagactttgcactgca
actgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatccgtagc
atagtgtctgagtctgatgtctcctcatttgaaatccagcatagtgggtttgttaaacag
ctgctgctttacttgacatctaaaagtgaaaaagatgctgtaagcagggatatcagatta
aaaagattccttcatgtgtttttttcttctccacctcctgaagaagaacctgttggaaga
ttagaaccggtaggaaatgcacctttgttggcattagtccacaaaatgaacaactgtctc
agtcagatggagcagtttcctgtcaaagtgcatgattttccaagtggaaatggaacaggg
agcagtttttctctcaacagaggatcccaagctttaaaatttttcaacactcatcaatta
aaatgccagctgcaaagacatccagattgtgctaatgtgaaacagtggaagggtggacct
gtgaagatagatccactggctttggtgcaagccattgaaagataccttgtagttagagga
tatggaagagtcagagaagatgatgaggacagtgatgatgatggatccgatgaagaaata
gatgaatctttggctgctcagttcttaaattcaggaaatgtgaggcacagactgcagttc
tacattggagatcacttgctgccatacaatatgactgtgtatcaagcagttagacagttc
agtttacaagctgaagaggagagggaatctacagatgatgaaagcaaccctttgggaaga
gctggaatttggacaaagacacacaccatatggtacaaaccagttcgagaggatgaagat
ggtaataaggactgtgttggaggtaaaagaggaagggcacaaactgctcccacaaaaact
tcccctagaaattcaaaaaagcatgatgagttgtggcatgatggcgtgtgcccttcagtg
tcaaatcctttagaagcttaccttgtatttacgccgccagaaaatataacatttgaagac
ccctcattagatgttatcctccttttgagagttttacatgctatcagtcgatactggtat
tacctgtatgaaaatgcagtttgcaaggagattattccaaccacggaatttattaatagt
aaactgacagcaaaagctaacaggcagcttcaggatcctttggtaatcatgacaggaaac
ataccaatttggctgacagaacttggaaaaacatgcccatttttctttccatttgacacc
cggcaaatgctattttatgtaactgcttttgatcgagatcgagcaatgcagagattacta
gatactaatccagaaatcaatcagtcagattctcaggacagcagagtggcaccacggctg
gacaggaaaaaacgcactgtgaacagagaagagctgttgaaacaagcagaatctgtgatg
caagatctgggcagttcaagagctatgttggaaattcagtacgagaatgaagttggcaca
ggtctagggcctacactggagttttatgcacttgtatctcaggaactacagagggcagac
ttaggcctctggagaggagaagaagtaactctatccaatccgaaaggaaaccaagaaggc
acaaagtatattcataatctccaaggcctatttgctcttccctttggtagaacagctaaa
ccagctcatattgcaaaggttaaaatgaagttccgttttctgggaaaactaatggccaag
gctatcatggatttcagattggtggaccttccccttggccttcctttttacaaatggatg
ttaagacaagaaacttccctaacctcacatgatttgttcaatatcgatccagtagtagct
agatcagtatatcatcttgaagatatagtgagacagaagaaaagacttgaacaggacaaa
tcacagaccaaagaaagtttacagtatgcattggagacactcaatatgaatggctgctca
gtggaagatctaggactggatttcacattacctgggtttcccaatatagagctgaaaaaa
ggggggaaagatatacctgtcaccatccacaatttagaagaatatctcagactggttata
ttctgggcactaaatgaaggtgtttccagacaatttgactccttcagagatggatttgaa
tcagtcttccctctcagtcatcttcagtacttctatcctgaagagttggatcagctcctg
tgtggcagtaaaacagacacatgggatgcaaagacattaatggaatgctgcaggccagac
catggttatacacatgacagtcgagctgtgaagtacctgtttgaaattcttagtagtttt
gatagtgagcaacaaagattatttcttcaatttgtgactggtagccctagactgccagta
ggaggctttcgaagtttgaatcctccactgacaattgtacgcaagacatttgagtctaca
gaaaatccagatgacttcttgccctcagtaatgacttgtgtgaattatctcaagttgccg
gactattcaagtattgagataatgcgtgaaaaactcttgatagctgcaagagaagggcag
cagtcattccatctttcctga
DBGET
integrated database retrieval system
