Pelodiscus sinensis (Chinese soft-shelled turtle): 102458826
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Entry
102458826 CDS
T02980
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04510
Focal adhesion
pss04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102458826 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102458826 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
102458826
NCBI-ProteinID:
XP_014427649
Ensembl:
ENSPSIG00000008782
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MTDDQPAAQHAVSRKQQQQQEANAFIFQASLPASMEKKSCGLILQKAQRAKYNTKTKYVY
RQGTTIPLFDTTANAKTNKLNVFLFQEDKKCFTCDSRYPFHETLNTDSHRIENVVTTFAP
NRLKLWWQSENGLENVTLQLDLEAEFHFTHLIMTFKAFRPAAMLIERSSDFGKTWQVYRY
FAYDCENSFPGVSAGPMKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPRIQ
NLLKITNLRINFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDA
FNEEVEGMVHGHCMCRHHTKGLNCELCLDFYHDLPWRPAEGRNSNACKKCNCNGHSTQCH
FDMAVYMATGNTSGGVCDDCQHNTMGRNCEQCKPFYFQHPERDIRDPNICEPCNCDPLGS
QNGGICDRYTDFSAGLIAGQCRCKSLVEGERCDLCKEGFYGLSADNPLGCQSCACNPLGT
LPGGNPCDSVTGSCYCKRLATGKHCEQCLAEHWGLSNDMDGCRPCDCDQGGALNNNCSSE
TGQCQCRPHIIGRQCNEMEPSYYFMLLDHYIYEAEEANFGPGVSIVERQYSPDRIPSWTG
VGFVRVPEGAYLEFYIDDIPYSMEYEVVIRYEPQLPDRWEKAVITVSRPGKIPTSSRCGN
TVPQFDDNQNVSLSPGSRYVVLPRPVCFEKGLNYTVRLELTQYSSVDTELESPYTLIDSL
VLMPYCKSLDIFMVGGSGEDVITNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISA
LLHESALACQCNPQGSFSSVCDPNGGQCQCRPNVVGRKCDRCAPGTFGFGPNGCTPCDCH
MQGSVSSFCHPETGQCHCFHGVYGRQCDRCLPGYWGFPSCQLCQCNGHTDDCDPYTGECL
NCRDSTMGHNCERCLGGYYGDPVLGSGDHCRPCPCPDGPESGRQFASSCYQDPNTLQVVC
VCNVGYIGSRCDECASGFFGDPEEQGGVCQPCQCHNNIDMTDPGACDKQSGKCLKCLYQT
EGEHCHLCKHGYYGHALKQDCRKCVCNYLGTVREHCNNSEDCQCEKTTGQCQCLPNVTGQ
NCDRCAPNTWRLASGTGCELCECDVAHSFGPSCNEFTGQCQCMPGFGGRTCRECQEFFWG
DPNVACQACDCDPRGIQTPQCNRSTGLCVCKEGVEGPHCDKCTRGYSGIFPDCAPCHQCF
ALWDIIISELTNRTQRFLERAKILKISGVTGPYQQTVNTVEEKLNEIKSILAQNPAAEPL
KNIGNLFEEAGKLTADITEKMAEIEDKLSVITLKSNNTDAHLKALETDAESLDHVVKELA
EQLEFIKISDIRGALDSITKYFQMSLEAEERVNATTVHPDSLVEQSTQTRQEVEDLIGEQ
EAQFKAKQEEQSRLLDELAGKLQSLDLSEVAEKTCGTPPGASCADSKCGGLSCRTDEGEK
KCGGPGCEGLVTVAHSAWQKAMDFDRDILGALADVEELSKMVSEAKQRADEAKQNAQEVL
LKTNATKEQVDRSNEELRSLIKQIREFLMQDSADLDSIEAVAKEVLNMEMPSTPKQLQTL
TQDIRERVESLSDVEVILQQSAGDIARAEMLLDEANKASKSATDVKVTAAMVKEALEEAE
KAQTAAEKAIKQADEDIKGTQDLLTSIESENAASEETLNNATLRLTELEKSVEDLKQKAA
TNSENVEDIEETIATVKQSVEDVKEVLDSDLNAKYKTVENLIAKKTEESADARKKAGMLQ
NEAKSLLAQANSKLQLLKDLESTYENNQKVLEDKAKQLVELEETVRSLLQAISQKVAVYS
TCL
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgatcaaccagcagcacagcatgctgtttccagaaagcagcagcagcagcag
gaggcaaatgctttcatctttcaggccagcttaccagcatctatggaaaaaaaatcttgt
ggattaattctacaaaaggcacaaagagccaaatataacactaaaaccaaatatgtttat
cgtcaaggaacaactattccactttttgatacaacagccaatgctaagactaataagtta
aatgtcttcttatttcaggaggacaaaaaatgtttcacatgcgattctcggtaccccttt
catgagactctcaacactgatagccatcgtattgaaaatgtggtcacaacgtttgctcca
aaccgcctcaagctgtggtggcagtcagaaaatggtttggaaaatgtaactctccagctg
gatctggaagctgaattccattttactcatctcattatgaccttcaaggcctttcgccca
gctgcaatgctaatagaaagatcatctgattttggaaaaacctggcaagtatatagatac
ttcgcatatgactgtgaaaactccttccctggtgtttctgctggacccatgaagaaagta
gatgatatcatttgtgattcccgatattctgacattgaaccttcaactgagggagaggtc
atatatcgtgccttagatccagcttttagaattgaagacccatatagtccaagaattcaa
aacctgttaaaaatcacaaatttaaggatcaatttcaccaaattgcatacattgggagac
aacctcttggattctagaatggaaataaaagaaaagtattattatgccatttacgacatg
gtggttcgtgggaactgtttctgttatggccatgccagtgagtgtgcaccagtggatgct
tttaatgaagaggtggaaggaatggtccatgggcactgcatgtgccgacatcataccaaa
gggttaaactgtgaactgtgtttggatttctaccatgacttaccatggagaccagctgaa
ggacgcaatagtaatgcatgtaaaaaatgcaattgcaatggacactctacccagtgtcac
ttcgacatggctgtgtacatggcaactggaaataccagtggtggagtgtgtgatgactgc
cagcataacacaatgggccgcaactgtgaacaatgcaaaccattttacttccagcatcct
gagagagatataagggaccctaacatctgtgaaccttgtaattgtgacccactgggctcc
caaaacggtggaatatgcgatcgctacactgacttctctgctggtcttattgctggacag
tgccgttgtaaatcccttgttgaaggggaacgttgcgacctctgcaaagaagggttctat
ggattaagtgccgataaccccttgggttgccaatcttgtgcctgtaatcctttgggaact
cttcctggagggaatccttgtgattcagtcacaggaagctgctattgtaaacgtctagcc
acaggaaagcactgtgagcagtgtctggctgaacactggggcctgagcaatgacatggat
ggatgtcggccatgtgactgtgaccaagggggagcactgaacaataactgctcaagtgaa
actggccagtgtcagtgccggccccacataattggacgccagtgcaatgaaatggagcct
agctattacttcatgttgctagaccactacatctatgaggcagaggaagccaactttggt
cctggagtgagtatagtagagcgccagtattctcccgatcgtatcccatcctggactgga
gtaggatttgtaagagtccctgaaggcgcatatctggaattctatatcgacgatattcca
tattctatggagtatgaagttgtgattcgctatgaaccacagttaccagatcgttgggaa
aaagctgttattactgtttcacgcccaggcaagatccctacaagtagccgatgtggtaat
actgttcctcagtttgatgataatcagaatgtatcattatcaccaggttcaagatatgta
gtccttccacgcccagtgtgttttgaaaagggactgaattacactgttcgtctggagcta
acacagtattcctccgtcgatactgagctggaaagcccatacacactcattgactctctt
gttcttatgccttactgcaagtcgttggacatattcatggtggggggttcaggtgaagat
gtgatcaccaacagcgcttgggaaacatttcaaagatatcgatgtctggaaaacagtagg
agcgttgtgaaaacccctatgactgatgtctgcaagaatattatttttagcatctctgca
ctgctacatgagtctgcattagcttgccagtgtaatcctcaaggctcattcagttcagtg
tgtgaccctaatggaggacagtgccagtgtcgacctaatgttgttggaagaaaatgtgac
cgatgtgcgcctggcacctttgggtttggacctaacggatgcaccccttgtgactgtcac
atgcaaggttctgtcagttccttctgtcatcctgagactggccagtgccactgtttccat
ggagtatatggccgtcagtgtgataggtgcttacctggatactgggggtttccaagctgt
cagctttgccaatgtaatggccacacggatgactgtgacccatacactggggaatgtttg
aattgccgcgattccaccatgggacacaactgtgaaaggtgccttgggggctattatgga
gaccctgtcctaggatctggagatcattgtcggccttgtccttgcccagatggcccagaa
agtgggcgtcagtttgccagcagctgttatcaagatcctaatactctgcaagttgtgtgt
gtctgtaatgtgggatatataggaagcagatgtgatgaatgtgcttctggtttctttgga
gaccctgaagagcaaggtggagtgtgccaaccctgccagtgtcacaacaacattgacatg
actgacccaggtgcctgtgacaagcagtctggaaagtgcctgaagtgtttgtatcaaaca
gagggagaacactgccacctgtgtaaacatgggtactatggccatgcactgaaacaggat
tgtagaaagtgcgtctgtaattacctgggcacagtgcgagagcactgtaacaactcagaa
gactgtcagtgtgagaaaacaactggtcagtgccagtgccttcccaatgtgaccggccag
aactgcgatcgctgtgcaccaaacacgtggaggctggccagtggtactggatgtgaactg
tgcgagtgtgatgttgctcattcctttgggccatcgtgtaatgagtttactgggcagtgt
cagtgcatgcctggctttggaggccgcacctgcagggagtgccaagagtttttctggggt
gaccccaatgtggcatgccaagcttgtgactgcgatccccgtggaatccagacaccacaa
tgcaatcgctctactgggttgtgtgtctgtaaggagggtgtcgagggaccccactgtgac
aagtgtacccgtggctactctggcatctttcctgactgcgcaccatgtcaccagtgtttt
gctctgtgggacatcatcattagtgaactcactaataggacacagaggttcctggagaga
gcaaaaatcctaaaaatcagtggggtcaccggcccttatcagcaaactgtcaacacagtg
gaagagaaactgaatgaaattaaaagtatccttgctcaaaatccagctgctgagcccctt
aaaaacattggaaatctctttgaggaagcagggaagctaacagcagacattacagaaaag
atggctgaaatagaagacaagctttccgtgataacattaaaaagtaataatacggacgca
cacctgaaggccctggagacagatgcagaaagccttgaccatgttgtgaaagaacttgca
gaacaactcgagtttataaaaatctccgatatccggggcgccttggatagtatcaccaaa
tatttccagatgtccctggaggcagaagagagggtcaatgccactactgttcaccctgat
agccttgtggaacagtcaactcagacacgacaggaagtggaagacttaatcggtgagcaa
gaggctcagttcaaggcgaaacaagaggagcagtcacgccttctggatgaactggccggc
aaactgcaaagtctggatctttctgaagtggctgagaagacttgtggaactccccctggg
gcttcctgcgctgactcaaagtgtggtggtctgagctgccgaacagatgaaggagaaaag
aaatgcggaggaccaggctgtgaaggtctggttactgtggctcacagcgcgtggcagaaa
gccatggattttgacagagacatactcggtgcattggcagatgttgaagagctctctaaa
atggtctctgaggcaaaacagagagcagatgaagcaaaacaaaatgcacaagaagttttg
ctcaaaaccaatgccacaaaagagcaagtggacagaagcaacgaagagctgagaagcctt
attaagcagatcagggaatttctgatgcaagatagcgctgatttggatagcatcgaggca
gttgctaaagaagtgttgaacatggagatgccaagtacccccaagcagctacagaccctg
acacaagatatccgtgagcgtgtggaaagcctttctgatgtagaggttatcttacagcaa
agtgccggagacattgctagagcagagatgttgctagatgaagcgaataaagcaagcaaa
agtgcaacagatgttaaagtcactgcggccatggtgaaggaagccctggaagaagctgaa
aaggcccaaactgcagccgaaaaggccatcaaacaagctgatgaggacattaaaggaaca
caggatctacttacctcaattgaatctgaaaatgcagcatctgaagaaactttaaacaat
gctaccctgcgtcttactgagctagagaaaagtgtggaagaccttaaacaaaaggctgct
acaaattcagagaacgtggaagacattgaagaaaccattgcaactgtgaaacaaagtgtg
gaagacgttaaagaggtacttgacagtgatctgaatgccaaatataaaacagttgaaaac
ctaattgccaagaaaacggaagagtctgctgatgccaggaagaaagctggaatgctgcag
aatgaagctaaatcactgctagctcaagcaaacagcaaactccagctgctcaaggatttg
gaaagcacatatgaaaacaatcagaaagtcttggaagacaaagccaaacagttggtggag
ttagaagaaacagtgcgttccctcttacaggcaatcagccagaaagttgcagtatacagc
acctgcttgtaa
DBGET
integrated database retrieval system
