KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102458826
Entry
102458826         CDS       T02980                                 
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
  KO
K05636  laminin, beta 1
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04510  Focal adhesion
pss04512  ECM-receptor interaction
pss04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:pss00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102458826 (LAMB1)
   04518 Integrin signaling
    102458826 (LAMB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102458826 (LAMB1)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN ATG17_like F5_F8_type_C BNR_6
Other DBs
NCBI-GeneID: 102458826
NCBI-ProteinID: XP_075783370
Ensembl: ENSPSIG00000008782
LinkDB
Position
1:complement(27199680..27292314)
AA seq 1787 aa
MGSLQVYAGALLGLCVAALAQEPEYSYGCAEGSCYPATGDLLIGRASKLAASSTCGLQRP
EPFCIVSHLQEDKKCFTCDSRYPFHETLNTDSHRIENVVTTFAPNRLKLWWQSENGLENV
TLQLDLEAEFHFTHLIMTFKAFRPAAMLIERSSDFGKTWQVYRYFAYDCENSFPGVSAGP
MKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPRIQNLLKITNLRINFTKLH
TLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDAFNEEVEGMVHGHCMCR
HHTKGLNCELCLDFYHDLPWRPAEGRNSNACKKCNCNGHSTQCHFDMAVYMATGNTSGGV
CDDCQHNTMGRNCEQCKPFYFQHPERDIRDPNICEPCNCDPLGSQNGGICDRYTDFSAGL
IAGQCRCKSLVEGERCDLCKEGFYGLSADNTLGCQSCACNPLGTLPGGNPCDSVTGSCYC
KRLATGKHCEQCLAEHWGLSNDMDGCRPCDCDQGGALNNNCSSETGQCQCRPHIIGRQCN
EMEPSYYFMLLDHYIYEAEEANFGPGVSIVERQYSPDRIPSWTGVGFVRVPEGAYLEFYI
DDIPYSMEYEVVIRYEPQLPDHWEKAVITVSRPGKIPTSSRCGNTVPQFDDNQNVSLSPG
SRYVVLPRPVCFEKGLNYTVRLELTQYSSVDTELESPYTLIDSLVLMPYCKSLDIFMVGG
SGEDVITNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHESALACQCNPQGS
FSSVCDPNGGQCQCRPNVVGRKCDRCAPGTFGFGPNGCTPCDCHMQGSVSSFCHPETGQC
HCFHGVYGRQCDRCLPGYWGFPSCQLCQCNGHTDDCDPYTGECLNCRDSTMGHNCERCLG
GYYGDPVLGSGDHCRPCPCPDGPESGRQFASSCYQDPNTLQVVCVCNVGYIGSRCDECAS
GFFGDPEEQGGVCQPCQCHNNIDMTDPGACDKQSGKCLKCLYQTEGEHCHLCKHGYYGHA
LKQDCRKCVCNYLGTVREHCNNSEDCQCEKTTGQCQCLPNVTGQNCDRCAPNTWRLASGT
GCELCECDVAHSFGPSCNEFTGQCQCMPGFGGRTCRECQEFFWGDPNVACQACDCDPRGI
QTPQCNRSTGLCVCKEGVEGPHCDKCTRGYSGIFPDCAPCHQCFALWDIIISELTNRTQR
FLERAKILKISGVTGPYQQTVNTVEEKLNEIKSILAQNPAAEPLKNIGNLFEEAGKLTAD
ITEKMAEIEDKLSVITLKSNNTDAHLKALETDAESLDHVVKELAEQLEFIKISDIRGALD
SITKYFQMSLEAEERVNATTVHPDSLVEQSAQTRQEVEDLIGEQEAQFKAKQEEQSRLLD
ELAGKLQSLDLSEVAEKTCGTPPGASCADSKCGGLSCRTDEGEKKCGGPGCEGLVTVAHS
AWQKAMDFDRDILGALADVEELSKMVSEAKQRADEAKQNAQEVLLKTNATKEQVDRSNEE
LRNLIKQIREFLMQDSADLDSIEAVAKEVLNMEMPSTPKQLQTLTQDIRERVESLSDVEV
ILQQSAGDIARAEMLLDEANKASKSATDVKVTAAMVKEALEEAEKAQTAAEKAIKQADED
IKGTQDLLTSIESENAASEETLNNATLRLTELEKSVEDLKQKAATNSENVEDIEETIATV
KQSVEDVKEVLDSDLNAKYKTVENLIAKKTEESADARKKAGMLQNEAKSLLAQANSKLQL
LKDLESTYENNQKVLEDKAKQLVELEETVRSLLQAISQKVAVYSTCL
NT seq 5364 nt   +upstreamnt  +downstreamnt
atgggcagcctccaggtgtacgcgggcgccctgctagggctgtgtgtcgccgccctggcc
caggagcccgagtacagctacgggtgcgccgagggcagctgctaccccgccaccggcgac
ctgctcatcggccgcgcctcgaagctcgccgccagctccacgtgcgggctgcagcggccc
gagcccttctgcatcgtgagccacctccaggaggacaaaaaatgtttcacatgcgattct
cggtacccctttcatgagactctcaacactgatagccatcgtattgaaaatgtggtcaca
acgtttgctccaaaccgcctcaagctgtggtggcagtcagaaaatggtttggaaaatgta
actctccagctggatctggaagctgaattccattttactcatctcattatgaccttcaag
gcctttcgcccagctgcaatgctaatagaaagatcatctgattttggaaaaacctggcaa
gtatatagatacttcgcatatgactgtgaaaactccttccctggtgtttctgctggaccc
atgaagaaagtagatgatatcatttgtgattcccgatattctgacattgaaccttcaact
gagggagaggtcatatatcgtgccttagatccagcttttagaattgaagacccatatagt
ccaagaattcaaaacctgttaaaaatcacaaatttaaggatcaatttcaccaaattgcat
acattgggagacaacctcttggattctagaatggaaataaaagaaaagtattattatgcc
atttacgacatggtggttcgtgggaactgtttctgttatggccatgccagtgagtgtgca
ccagtggatgcttttaatgaagaggtggaaggaatggtccatgggcactgcatgtgccga
catcataccaaagggttaaactgtgaactgtgtttggatttctaccatgacttaccatgg
agaccagctgaaggacgcaatagtaatgcatgtaaaaaatgcaattgcaatggacactct
acccagtgtcacttcgacatggctgtgtacatggcaactggaaataccagtggtggagtg
tgtgatgactgccagcataacacaatgggccgcaactgtgaacaatgcaaaccattttac
ttccagcatcctgagagagatataagggaccctaacatctgtgaaccttgtaattgtgac
ccactgggctcccaaaacggtggaatatgcgatcgctacactgacttctctgctggtctt
attgctggacagtgccgttgtaaatcccttgttgaaggggaacgttgcgacctctgcaaa
gaagggttctatggattaagtgccgataacaccttgggttgccaatcttgtgcctgtaat
cctttgggaactcttcctggagggaatccttgtgattcagtcacaggaagctgctattgt
aaacgtctagccacaggaaagcactgtgagcagtgtctggctgaacactggggcctgagc
aatgacatggatggatgtcggccatgtgactgtgaccaagggggagcactgaacaataac
tgctcaagtgaaactggccagtgtcagtgccggccccacataattggacgccagtgcaat
gaaatggagcctagctattacttcatgttgctagaccactacatctatgaggcagaggaa
gccaactttggtcctggagtgagtatagtagagcgccagtattctcccgatcgtatccca
tcctggactggagtaggatttgtaagagtccctgaaggcgcatatctggaattctatatc
gacgatattccatattctatggagtatgaagttgtgattcgctatgaaccacagttacca
gatcattgggaaaaagctgttattactgtttcacgcccaggcaagatccctacaagtagc
cgatgtggtaatactgttcctcagtttgatgataatcagaatgtatcattatcaccaggt
tcaagatatgtagtccttccacgcccagtgtgttttgaaaagggactgaattacactgtt
cgtctggagctaacacagtattcctccgtcgatactgagctggaaagcccatacacactc
attgactctcttgttcttatgccttactgcaagtcgttggacatattcatggtggggggt
tcaggtgaagatgtgatcaccaacagcgcttgggaaacatttcaaagatatcgatgtctg
gaaaacagtaggagcgttgtgaaaacccctatgactgatgtctgcaagaatattattttt
agcatctctgcactgctacatgagtctgcattagcttgccagtgtaatcctcaaggctca
ttcagttcagtgtgtgaccctaatggaggacagtgccagtgtcgacctaatgttgttgga
agaaaatgtgaccgatgtgcgcctggcacctttgggtttggacctaacggatgcacccct
tgtgactgtcacatgcaaggttctgtcagttccttctgtcatcctgagactggccagtgc
cactgtttccatggagtatatggccgtcagtgtgataggtgcttacctggatactggggg
tttccaagctgtcagctttgccaatgtaatggccacacggatgactgtgacccatacact
ggggaatgtttgaattgccgcgattccaccatgggacacaactgtgaaaggtgccttggg
ggctattacggagaccctgtcctaggatctggagatcattgtcggccttgtccttgccca
gatggcccagaaagtgggcgtcagtttgccagcagctgttatcaagatcctaatactctg
caagttgtgtgtgtctgtaatgtgggatatataggaagcagatgtgatgaatgtgcttct
ggtttctttggagaccctgaagagcaaggtggagtgtgccaaccctgccagtgtcacaac
aacattgacatgactgacccgggtgcctgtgacaagcagtctggaaagtgcctgaagtgt
ttgtatcaaacagagggagaacactgccacctgtgtaaacatgggtactatggccatgca
ctgaaacaggattgtagaaagtgcgtctgtaattacctgggcacagtgcgagagcactgt
aacaactcagaagactgtcagtgtgagaaaacaactggtcagtgccagtgccttcccaat
gtgaccggccagaactgcgatcgctgtgcaccaaacacatggaggctggccagtggtact
ggatgtgaactgtgcgagtgtgatgttgctcattcctttgggccatcgtgtaatgagttt
actgggcagtgtcagtgcatgcctggctttggaggccgcacctgcagggagtgccaagag
tttttctggggtgaccccaatgtggcatgccaagcttgtgactgcgatccccgtggaatc
cagacaccacaatgcaatcgctctactgggttgtgtgtctgtaaggagggtgtcgaggga
ccccactgtgacaagtgtacccgtggctactctggcatctttcctgactgcgcaccatgt
caccagtgttttgctctgtgggacatcatcattagtgaactcactaataggacacagagg
ttcctggagagagcaaaaatcctaaaaatcagtggggtcaccggcccttatcagcaaact
gtcaacacagtggaagagaaactgaatgaaattaaaagtatccttgctcaaaatccagct
gctgagccccttaaaaacattggaaatctctttgaggaagcagggaagctaacagcagac
attacagaaaagatggctgaaatagaagacaagctttccgtgataacattaaaaagtaat
aatacggacgcacacctgaaggccctggagacagatgcagaaagccttgaccatgttgtg
aaagaacttgcagaacaactcgagtttataaaaatctccgatatccggggcgccttggat
agtatcaccaaatatttccagatgtccctggaggcagaagagagggtcaatgccactact
gttcaccctgatagccttgtggaacagtcagctcagacacgacaggaagtggaagactta
atcggtgagcaagaggctcagttcaaggcgaaacaagaggagcagtcacgccttctggat
gaactggccggcaaactgcaaagtctggatctttctgaagtggctgagaagacttgtgga
actccccctggggcttcctgcgctgactcaaagtgtggtggtctgagctgccgaacagat
gaaggagaaaagaaatgcggaggaccaggctgtgaaggtctggttactgtggctcacagc
gcgtggcagaaagccatggattttgacagagacatacttggtgcattggcagatgttgaa
gagctctctaaaatggtctctgaggcaaaacagagagcagatgaagcaaaacaaaacgca
caagaagttttgctcaaaaccaatgccacaaaagagcaagtggacagaagcaacgaagag
ctgagaaaccttattaagcagatcagggaatttctgatgcaagatagcgctgatttggat
agcatcgaggcagttgctaaagaagtgttgaacatggagatgccaagtacccccaagcag
ctacagaccctgacacaagatatccgtgagcgtgtggaaagcctttctgatgtagaggtt
atcttacagcaaagtgccggagacattgctagagcagagatgttgctagacgaagcgaat
aaagcaagcaaaagtgcaacagatgttaaagtcactgcggccatggtgaaggaagcactg
gaagaagctgaaaaggcccaaactgcagccgaaaaggccatcaaacaagctgatgaggac
attaaaggaacacaggatctacttacctcaattgaatctgaaaatgcagcatctgaagaa
actttaaacaatgctaccctgcgtcttactgagctagagaaaagcgtggaagaccttaaa
caaaaggctgctacaaattcagagaacgtggaagacattgaagaaaccattgcaactgtg
aaacaaagtgtggaagacgttaaagaggtacttgacagtgatctgaatgccaaatataaa
acagttgaaaacctaattgccaagaaaacggaagagtctgctgatgccaggaagaaagct
ggaatgctgcagaatgaagctaaatcactgctagctcaagcaaacagtaaactccaactg
ctcaaggatttggaaagcacatatgaaaacaatcagaaagtcttggaagacaaagccaaa
cagttggtggagttagaagaaacagtgcgttccctcttacaggcaatcagccagaaagtt
gcagtatacagcacctgcttgtaa

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