KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102459165
Entry
102459165         CDS       T02980                                 
Symbol
HERC1
Name
(RefSeq) LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase HERC1
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
SSDB
Motif
Pfam: RCC1 HECT RCC1_2 WD40_CDC20-Fz WD40 SPRY WD40_WDHD1_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_EML_2 Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_2nd CLASP_N
Other DBs
NCBI-GeneID: 102459165
NCBI-ProteinID: XP_006139763
LinkDB
Position
Unknown
AA seq 3157 aa
DGIRSAKRNIQIEIQVAVHKIYQQLSATLERALQANKHHIEAQQRLLLVTVFALSVHYQP
VDVSLAISTGLLNVLSQLCGTDTMLGQPLQLLPKTGISQLSTALKVASTRLLQILAITTG
TYADKLSPKVVQSLLDLLCSQLKNLLSQAGVMLMASFGEGEGEEDEEEEKKLDPDGDNEK
RDFRAALRKQHAAELHLGDFLVFLRRVVSSKAIQSKMASPKWTEVLLNIASQKCCSGVPL
VGNLRTRLLALHVLEAVLPACESSVEDDQMDQVVEQLFSLLSDCMWETPIAQAKYAIQIK
EREQEMKLQKQGESEEEDENLPIQEVSFDPEKAQCCIVENGQILTHGSGGKGYGLASTGV
TSGCYQWKFYIVKENRGNEGTCVGVSRWPVHDFNHRTTSDMWLYRAYSGNLYHNGEQTLT
LSSFTQGDFITCVLDMEARTISFGKNGEEPKLAFEDVDAAELYPCVMFYSSNPGEKVKIC
DMQMRGTPRDLLAGDPICSPVAAVLAEATIQLIRILHRADRWTHCINKKMMERLHKIKMC
LKEAGQKLKKSRSVQSRDENDMREERENKEEEKNKHCRHGLAELSEVQLKTLCVEVWPVL
AVIGGVDAGLRVGGRCVHKQTGRHATLLGVAKEGSTSAKVQWDEAEITISFPTFWSPSDT
PLYNLEPCEPLPFDVARFRGLTATVLLDLTYLTGIHEDMGKQSAKRHEKKHRHEAEEKGD
IEQKMEGDTGSDMRSLLSADDIKGPITTCSKSENEIASFSLEPTPLGMESQHQTIEGKRK
NHDHISRNHDVVQSELRAVQLSYLYLGAMKSLSALLSCSKYAELLLIPKILAENGHNSDC
ASSPVVHEDVEMRAALQFLMRHMVKRAVMRSPIKRALGLADLERAQAMIYKLVVHGLLED
QFGGKIKQEVDQQAEESDQAQQAQTPVTTSPSASSTTSFMSSSLEDTTTATTPVTDTETV
PASESPGVMPLSLLRQMFSSYPTTTVLPTRRAQTPPISSLPTSPSDEVGRRQSLTSPDSQ
STRPANRTALSDPSSRLSTSPPPPAIAVPLLEMGFSLRQIAKAMEATGARGEADAQNITV
LAMWMIEHPGNEEDEELQSEGTADSHHGTIVSGSSGKSSDQCYLQSPGDIPSADSTELEE
GFGESTDNMDHPENAASGSGPPSRGRSAVTRRHKFDLAARTLLARAAGLYRSVQAHRNQS
RREGISLQQDPGALYDFNLDEELEIDLDDEAMEAMFGQDLASDNDILGMWIPEVLDWPTW
HVCESEDREEVVVCELCESSVVSFNQHMKRNHPGCGRSANRQGYRSNGSYVDGWFGGECG
SGNPYYLLCGSCREKYLALKSKSKTSTSERYKGQAPDLIGKQDSVYEEDWDMLDVDEDEK
LTGEEEFELLAGPLGLNDRRIVPEAVQFPDSDPLGASVAMVTATNSMEETLMQIGCHGSI
EKSSSGRITLGEQAAALVNPHDRVMALRRVTAAAQVLLARTMVMRALSLLSVSGSSCSLA
AGLESLGLTDIRTLVRLMCLAAAGRAGLSTSPSTMSSSTERSRGVHSKTSKPISCLAYLS
TAVGCLASNTPSAAKLLVQLCTQNLISAATGVNLTTVDDPIQRKFLPSFLRGIAEENKLV
TSPNFVVTQALVALLADKGAKLRPNYDKAEIEKKGPLELANALAACCLSSRLSSQHRQWA
AQQLVRTLAAHDRDNQISPQTLADMGGDLRKCSFIKLEAHQNRVMTCVWCNKKGLLATSG
NDGTIRVWNVTKKQYSLQQTCVFNKLXGDGAVWLGSPSDPSLSLVCWSISGKYLAGALEK
MVNIWQVNGGKGLLDLQPHWVSALAWPEEGPAATWTGDTPELLLVGRMDGSLGLIEVVDV
STMHRIELEHCYRKDVSVTCLAWFSEDRPFAVGYSDGKLLMGTKEPIEKGGIVLIDAHKD
TIVSVKWDPTGKILMTCAKEETVKLWRYVGGCWRCLHSLSHPAIVNSITWCNLPGKGAKL
QLLLATGCQNGLVCVWSVPQDMPMVLQSSSSSAEGWWEQETNGKDGHRKAVDAKCIYQLR
GHITPVRTVAFSSDGLALVSGGLGGLMNLWSLRDGSVLQSVVIGSGAIQTAVWIPDVGVA
ACSNRSKDVLVVNCTSEWMSSNHVLATCRTALKQQGVLGLNMAPCMRAFLERLPIMLQEQ
YAYEKPHVVCGDQLVHSPYMQCLASLAVGLHLDQLLCNPPVPPHYQSYLPDPSAWNPTEW
AWLECFSTTIKAAEALAKGVQFPESFTVPDLEPVPEDELMLLMDNSKWINGMDEQIMAWA
TSRPEDWHLGGKCDVYLWGAGRHGQLAEAGRNVMIPVAAPSFSQAQQVICGQNCTFVIQA
NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF
SWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVAQMSCGFKHSAVVTADGKLFTFGNGDYG
RLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVVVSTDGSMVWAFGDGDYGKLGLGNS
TAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQ
VPVLSGIFIEDIAVGAEHTLALSSSGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKN
IRQISAGRCHSAAWTAPPVPPRAPGVSVPLQLGLPDAIPPQYGALKEMSIHTVRARLRLL
YHFSDLMYSSWRLLNLSPNNQNSTSHYNAGTWGIVQGQLRPLLAPRVYTLPMVRSIGKTM
VQGKNYGPQITVKRISTRGRKCKPIFVQIARQVVKLNASDLRLPSRAWKVKLVGEGADDA
GGVFDDTITEMCQELETGVVDLLIPSPNATAEVGYNRDRFLFNSSACLDEHLMQFKFLGI
LMGVAIRTKKPLDLHLAPMVWKQLCCIPLTLEDLEEVDLLYVQTLNSILHIEDSGITEEN
FHEMIPLDSFVGQSADGKMVPIIPGGNSIPLTFSNRKEYVERAIEYRLHEIDRQVAAVRE
GMSWIVPVPLLSLLTAKQLEQMVCGMPEISVEVLKKVVRYREVDEQHQLVQWFWHTLEEF
SNEERVLFMRFVSGRSRLPANTADISQRFQIMKVDRPYDSLPTSQTCFFQLRLPPYSSQL
IMAERLRYAINNCRSIDMDNYMLSRNVDNAEGSDTDY
NT seq 9474 nt   +upstreamnt  +downstreamnt
gatggtatcagatcagccaagagaaatattcagattgaaatccaagtggctgtgcacaag
atttaccagcaattatctgctacactggagagagctctgcaagcaaacaagcaccacata
gaagcacaacagcgcctcctcttggtaactgtctttgctctaagtgtacactatcagcct
gttgatgtctccttggccatttccactggtctgctaaatgtactatcacagttgtgtggc
acagacaccatgctgggacaaccactgcaattgttgcccaaaactggtatttctcaactc
agcactgctttgaaagtggctagtacaaggttacttcaaatcctcgccattaccacagga
acttatgctgataaattgagccccaaagtggtccagtctttgctggatctgctatgcagt
cagttgaagaaccttttgtcacaagctggtgtgatgcttatggcttcctttggagaaggt
gaaggtgaagaagatgaggaagaagaaaaaaagttagatccagatggagataatgagaag
agagacttcagagctgcactccgaaagcaacatgccgcagaattgcacttgggtgacttt
ttagtctttctacgaagagttgtttcttcaaaagccattcagtcaaaaatggcttctcca
aaatggacagaagtgcttcttaatattgcatctcaaaagtgttgttcaggagtaccccta
gtgggtaacttaaggaccagactcctagcacttcatgtattagaagctgtgttgcctgct
tgtgaatccagtgttgaagatgatcagatggatcaggttgttgaacaattgttctctctt
ctatctgactgcatgtgggagacaccgatagctcaggctaaatatgcaattcaaataaaa
gaaagagagcaagaaatgaaactgcagaagcagggagaatctgaagaagaggatgagaat
cttcctatacaggaagtgtcctttgatcctgagaaagctcagtgctgcatagtagagaat
gggcaaattttaactcatggcagtggaggtaaaggatatggattagcatctacaggagtc
acttctgggtgttatcagtggaagttctatattgtgaaggaaaatcgaggtaatgaaggc
acatgcgtaggagtgtctcgctggccggtacatgactttaaccatcgcactacgtcagat
atgtggctgtatagagcctacagtggtaacctctatcataatggggaacagactttgact
ctgtccagttttactcaaggagacttcatcacttgtgtattggatatggaagctagaact
atttcatttggtaaaaatggagaggagccaaaactagcttttgaagatgtggatgcagca
gaattatacccttgtgtaatgttctatagcagtaacccaggagaaaaggtgaaaatatgt
gatatgcagatgcgtggcacacctagagacttgcttgctggtgatcctatctgtagtcct
gttgctgcagtgctagcagaggccactatccaacttatccgcatccttcatcgtgcagac
cgttggacgcactgcattaataaaaaaatgatggaacggctgcacaaaatcaaaatgtgc
cttaaagaagcaggtcaaaaactgaagaaaagtcgctcagtccaaagccgagatgagaat
gacatgagagaggagagagagaataaagaagaagagaaaaataaacattgtaggcatggt
cttgctgaactctcagaagttcagctcaagactctctgtgtagaggtatggcctgttctt
gcggtaattggtggagttgatgctggtcttcgagttggaggccgatgtgtacacaagcaa
actggacgtcatgccaccttacttggagtagccaaagagggcagtacatctgctaaagtc
cagtgggatgaagcagagattactatcagcttcccaactttttggtcgcctagtgatacc
ccactgtataatctggagccctgtgaaccactgccttttgatgttgcaagattccgtgga
ttgacagctacagtgttgctggaccttacctatctgactggtattcatgaagatatggga
aaacaaagtgccaagagacatgagaaaaaacacagacatgaggcagaagagaaaggggac
attgaacagaaaatggagggggatactggatcagatatgcgatcactactaagtgctgat
gatatcaaaggacccatcactacatgttccaagtcagaaaatgaaatagcttccttctct
ttagaaccaacaccactaggtatggagtctcaacatcaaactatagaaggaaaaagaaaa
aatcatgatcacatatcaagaaatcatgatgttgtacagtcagaactccgagcagtacag
ttatcctatctttaccttggtgctatgaaatcacttagtgctcttcttagttgtagtaaa
tatgctgagttactactgataccaaaaatccttgcagaaaatggtcataattctgattgt
gctagttctccagttgttcatgaagatgttgaaatgcgtgctgcattgcagttcctgatg
cgccatatggtgaaacgggcagtcatgcgttcaccaataaagagagctctaggactagca
gatttggaacgagcacaagccatgatctacaagttagtggttcatgggctattggaggac
cagtttggtggcaaaattaaacaagaagtagatcaacaagcagaagaaagtgaccaagca
cagcaggcccaaacaccagttactaccagcccttctgcttctagtactacatctttcatg
agcagctcgctggaagatactactactgctactacgccagtcacagatactgaaacagtg
ccagcttcagaatcacctggagttatgcctcttagtcttcttaggcaaatgttttcaagt
tacccaaccacaacagtacttccaacacgacgtgcacagactcctccaatatcctcctta
ccaacgtctccttctgatgaagtgggaaggagacaaagtctgacctctcctgattcccag
tccacgagacctgccaatcgtacagctttgtcagacccaagtagtcggctttcaacttct
cctcctccacctgccattgctgttccattgctagaaatgggattttctctcaggcagatt
gcaaaagctatggaagccacaggtgcaagaggagaagcagatgctcagaatatcacagtg
ctggccatgtggatgatagagcatcctgggaatgaagaagatgaagagctccaatcagaa
ggaactgcagattcacatcatgggacaatagtttctggaagcagtggaaaatctagtgac
cagtgttatttacaatcaccaggagatatcccgtcagctgattccactgaactggaggaa
ggttttggtgaaagtactgataatatggatcatccagagaatgcagcttctggaagtgga
cccccttcaagaggtcggtcagcagtaacaaggaggcataaatttgacttagctgctcgg
acattgctagcacgtgctgcgggattataccgctctgtacaggctcacagaaatcagagt
cggagagagggaatatctttgcagcaagatccaggagccttgtatgacttcaacttggat
gaagagttagaaattgaccttgatgatgaagcaatggaagcaatgtttggacaggatctc
gccagtgataatgatattctgggaatgtggatcccagaggtattggattggcctacctgg
catgtttgtgagtctgaagacagagaagaagtggtagtttgtgaattgtgtgaatccagt
gttgtcagcttcaatcaacatatgaaaagaaatcatcctggctgtggccgtagtgcaaat
cgacaaggctatcgtagcaatggttcctatgtggatgggtggttcggtggtgaatgtgga
agtggaaatccatactacctactctgcggcagctgcagagagaaatatttggccttgaag
agtaaatccaagacatcaacatcagaaaggtacaaaggccaggctcctgacttaataggc
aagcaagatagtgtctatgaagaagactgggatatgctggatgttgatgaagatgaaaag
ctgacaggagaagaggaatttgagttactggctggacctcttgggttaaatgatcgccgt
attgtacctgaggcagttcagttccctgacagtgatcccctgggagcatcagtagcaatg
gtcacagccaccaatagtatggaggagactttaatgcagataggctgtcacggctccata
gaaaaaagttcttctggcaggataaccttgggggaacaagctgctgcactagtaaatcca
catgaccgtgttatggcactacgaagagtgacagcagctgcccaagtccttcttgcaaga
accatggttatgagagcactctcactattgtctgtcagtggatccagttgtagccttgcg
gctggtcttgagtctttgggtttaacggatatccgaactttggttcgattaatgtgcctg
gctgcagcagggagagcaggcctctccacaagtccatccacaatgtccagttctacagag
cggtctagaggagtacatagtaaaacaagcaagcctatatcttgcctggcctacctgagt
acagctgtaggctgcttggcatcaaatactcctagtgctgcaaaactgctggtacagttg
tgtacgcagaacttgatttctgctgcaactggtgtaaatttgacgacagttgatgatcca
atccaaagaaaatttttgccaagttttctgcgaggaattgcagaagaaaacaagcttgta
acatcacccaactttgtggtaactcaagcacttgtggcattgttggcagacaaaggggct
aaattaaggccgaactatgataaagcagaaattgaaaagaaaggccctctggagctggct
aatgcattagcagcttgctgcctttcttcaaggttgtcctcgcaacataggcagtgggct
gcacagcagcttgtgcgaactcttgcagcacatgatcgagataatcaaataagtcctcag
acccttgctgacatgggtggagatctacgaaaatgctccttcataaaactggaggctcat
cagaacagggtgatgacatgtgtttggtgcaataaaaagggacttttggcaaccagtggg
aatgatggaactataagagtgtggaatgtaacaaagaagcaatattcactgcagcaaaca
tgtgttttcaacaaactgtaaggggatggagctgtatggctggggtcacccagtgatcct
agcttgtctcttgtctgttggagcatcagtggcaagtatctggctggagctttggaaaaa
atggtgaacatatggcaggtcaatggaggaaaaggattattagaccttcagccccactgg
gtttctgctctagcttggccagaagaagggccagctgcaacatggacaggcgacacacca
gaactgttattagtaggtcgtatggatggatctcttgggcttattgaagttgtagatgtt
tcaaccatgcatcgaatagaactggagcattgctacagaaaggatgtgtctgttacatgc
cttgcctggttcagtgaagacagaccatttgcagttggctattcagatggaaaattgctg
atgggtacaaaggagccaattgaaaaaggaggaattgttctaattgatgcacataaggat
actattgttagtgtgaagtgggatccaactggtaagattcttatgacatgtgccaaagaa
gaaaccgtgaaactctggagatatgtaggaggatgctggaggtgtttgcattcactgtcc
catccagctattgtgaatagtattacctggtgcaaccttccagggaaaggagccaagttg
cagctgttactggctacaggatgccagaatggcttggtatgtgtttggagtgttccccag
gacatgccgatggtactacagtccagctcaagcagtgcagaaggatggtgggaacaggaa
acaaatggcaaggatggacacagaaaagcagtagatgccaagtgcatttatcagctgaga
ggacatattactcctgttcggactgtggccttcagctctgatggactggcattagtgtct
ggtgggcttggtggactcatgaacctttggtctttacgggatggctctgtattacaaagt
gttgtgattggttctggagctattcagactgcagtatggatccctgatgttggagtagct
gcttgctcaaatagatcaaaggatgtgttggtggtgaattgcacatcagaatggatgtct
tccaatcatgtcctggcaacatgccggactgcattgaagcaacagggtgttttaggatta
aatatggccccttgcatgagggctttcttggaacgtttgccaataatgcttcaggaacag
tatgcctatgaaaagccccatgtggtctgtggagatcagcttgttcatagcccttatatg
cagtgtctggcttcactcgctgtggggcttcacctagatcagcttttgtgtaatccacca
gtaccacctcattaccagagttacctccctgatccctcagcttggaatcctacagagtgg
gcctggttagaatgtttttctactacgataaaagctgctgaagcactggccaaaggagtc
caatttccagaatcctttactgttccagatctggagcctgtaccagaggatgagcttatg
cttctaatggataacagtaaatggattaatggtatggatgaacagattatggcttgggca
acttcaaggcctgaggattggcaccttggcggcaaatgtgatgtgtatctgtggggagca
ggacgccatgggcagctagcagaggctggtagaaatgtcatgataccagtagcagcacct
tcattctcacaggctcaacaggttatttgtggtcagaactgtacctttgtcattcaagcg
aacggtacagttttggcttgtggagaagggagttatggccgtttgggccaaggaaattct
gatgatcttcatgttttaactgttatttcagcacttcaaggttttgttgtaacacagcta
gtgacctcttgtggatctgatggacattccatggctttaacagaaagtggcgaggtcttc
agttggggagatggagattatggtaaacttggccatgggaacagtgacagacagcgcaga
cccagacaaatagaggccttacaaggagaagaagtggcacagatgtcatgtggctttaaa
cactcagcagtggtgacagcagatggaaaactgttcacatttggaaatggtgactatggt
cgattgggtctaggaaacacttccaacaagaaacttcctgaaagagtcacagcactggag
ggttaccagattggacaggtggcctgtggactaaaccatactgttgttgtgtccactgat
ggctcaatggtgtgggcttttggagatggagattatggaaaacttggtctgggaaactct
acagcaaagtcctcaccgcagaaagtggatattctttgtggaattggaataaagaaagtt
gcctgtggaacacaattttctgtggcattgacaaaagatggtcatgtatatacttttgga
caagatcgactgattggcttgcctgagggccgagctcgaaatcataacagaccacagcaa
gttccagtgctctcaggaatcttcattgaagatatagctgtaggagcagagcatacacta
gctttatcatcatctggtgatgtgtatgcttggggtagcaactcggaagggcagcttgga
ctgggccataccaaccatgtcagagagccaaccttaataactgttctacaaggaaagaat
attcgacagatctcagcaggacgttgtcacagtgctgcatggactgcccctcctgtccca
ccaagagctccaggtgtatcggtgcctttacagcttggtttacctgatgccattccacca
cagtatggtgcactgaaggaaatgagtattcatactgtgagagcaagactcagacttctg
taccatttttcagacctcatgtactcttcctggagattacttaatctcagccccaataac
cagaacagcacatctcattacaatgctggaacatggggcatagtccaaggacagctaaga
ccattattggcaccaagagtctacacacttcccatggtacgctccataggaaaaaccatg
gttcaggggaagaactatgggcctcaaattactgtaaaaagaatatcgaccagaggtcgg
aaatgtaagcctatttttgtacaaatagcaagacaagtggtaaaactgaatgcttcagac
cttcgcctaccatcccgtgcttggaaagtgaaattggttggagaaggagccgatgatgcc
gggggggtgtttgatgacactattacagaaatgtgccaggaactggaaactggtgtggtg
gacctgcttattccttctccaaatgctaccgcagaagtaggctacaatagggataggttt
ctttttaactcttcagcctgtttagatgaacacctgatgcagtttaaattcttaggcatt
ttgatgggtgtcgctattcgtaccaagaagcctttagatcttcatttggctccaatggtc
tggaagcaactttgttgtatcccacttactttggaggatttagaggaggtagacctgctg
tatgtgcagaccctcaacagcattcttcacattgaagacagtgggattactgaagagaat
ttccatgagatgattcctctagattcctttgttggccaaagtgctgatggtaaaatggtt
cccataatccctggtgggaacagtatcccacttactttttcaaacaggaaagaatatgtg
gagagggcaattgagtaccgacttcatgaaattgatcgtcaggtggctgctgtgcgggag
ggaatgtcttggattgttccagttcccttgttgtctcttctgactgctaagcaattggaa
caaatggtttgtggaatgccagaaatctcagttgaggtcctgaagaaagttgtgcggtac
agagaggttgatgaacagcatcagttagttcagtggttctggcacaccctggaagagttt
tcaaatgaggaaagagtccttttcatgaggtttgtgtcaggaagatctcgattgccagca
aacactgctgatatctctcagcgattccaaataatgaaggttgataggccttatgacagc
ttgcctacctcacagacgtgtttctttcagctgaggctcccaccatactccagtcagcta
atcatggcagagcgtttgcgctatgcaatcaataattgcaggtctatagatatggacaat
tacatgctctcacgcaatgtggacaatgcagaaggctcagatacagattattaa

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