Pelodiscus sinensis (Chinese soft-shelled turtle): 102459430
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Entry
102459430 CDS
T02980
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-X
KO
K06252
tenascin
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04510
Focal adhesion
pss04512
ECM-receptor interaction
pss04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102459430
04518 Integrin signaling
102459430
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102459430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pss00536
]
102459430
Glycosaminoglycan binding proteins [BR:
pss00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102459430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
102459430
NCBI-ProteinID:
XP_025046159
LinkDB
All DBs
Position
Unknown
AA seq
2442 aa
AA seq
DB search
PAEPGAQPSLGELSASDVTHDSVLLSWTVPAGDFDSFLLQYKDAEGQPQALPVDGGSRTV
TVPNLAPSRRYKFNLYGVSGRKRLGPLSTDATTAAEPQEAKPAPEPSLGDLSASDVTHES
VLLSWTVPAGDFDSFLLQYKDAEGQPQALPVDGGSRTVTVPNLAPSRRYKFNLYGVSGRK
RLGPLSTDATTGQRLPPGLRTAGGTRPTPQPSLGELSASDVTHDSVLLSWTVPAGDFDSF
LLQYKDAEGRPQALPMDGGSRTVTVPNLAPSRRYKFNLYGVSGRKRLGPVSTDATTVDSF
LLQYKDAEGQPQALPVDGGSRTVTVPNLAPSRRYKFNLYGVSGRKRLGPLSTDATTAAAP
QEEPSPQPSLGELSASDITHDSVLLSWTIDKGTFDSFLLQYKDAEGQPQALPVDGGSRTV
TVPNLAPSRRYKFNLYGVSGRKRLGPLSTDATTGQRREPSLGELSASDITHDSVLLSWTV
PAGDFDSFLLQYKDAEGQPQALPVDGGSRTVTVPNLAPSRRYKFNLYGVSGRKRLGPLST
DATTAPQTEQPAPQPSLGELSASDITHDSVLLSWTVPAGDFDSFLLQYKDAEGQPQALRV
DGASRTVTIPNLAPSHRYKWSCGMSPAPREPSLGELSASDVTHDSVLLSWTVPAGDFDSF
LLQYKDAEGKPQALPVDGGSRTVTVPNLAPSRRYKFNLYGVSGRKRLGPLSTDATTAAEP
QEEPTPHPSLGELSASDVTHDSVLLSWTVPAGDFDSFLLQYKDAEGQPQALRVDGASRTV
TVPNLAPSRRYKFNLYGVSGRKRLGPLSTDATTATAPQEEVRTQLRLGKLSAANAAHDSL
DLSWTVEEGTFDSFIVQYRDADGNPRALPVDGALRSLHLHDLAPSHRYKINLYGVSGRKR
LGPVSTNATTAAEPQGAKPTLEPSLGELSASDVTHDSVLLSWTVPAGDFDSFLLQYKDAE
GQPQALRVDGASRTVTVPNLAPSPLPVDGALRSLHLHDLAPSHRYKINLYGVSGRKRLGP
VSTNATTAPRTEEPLLQMTRVMLPSSDITHDSVRLSWTIDKGTFDSFLLQYKDAEGQPQA
LPVDGGSRSVTVPNLAPSRRYKFNLYGVSGRKRLGPVSTDATTEQMDVTGHVAAPTPAAP
VVRRGAPTAQPSLGDLSASDVTHESVRLSWTVPAGDFDSFLLQYKDAEGKPQALPVDGGS
RTVTVPNLAPSRRYKFNLYGVSGRKRLGPLSTDATTATTPQKEQPALQPSLGELSVSDIT
HDSVLLSWTIDKGTFDSFLLQYKDAEGQPQALPVDGGSRTVTVPNLAPSRRYKFNLYGVS
GRKRLGPLSTDATTAAARRDEEPTAQPSLGELSPSWPVPAGDFDSFLLQYKDAEGQPQAL
PVDGGSRTVTVPNLAPSRRYKFNLYGVSGRKRLGPLSTDATTATAPQEEVRTQLRLGKLS
AANAAHDSLDLSWTVEEGTFDSFIVQYRDADGNPRALPVDGALRSLHLHDLAPSHRYKIN
LYGVSGRKRLGPVSTNATTASAPQEEEPTSQPSLGELSASNITHDSVLLSWTVSTGDFDS
FLLQYKDAEGNPQELPVEGGFRTVTVPNLAPSRRYKFNLYGVSGRKRLGPVSTDATTAAE
VQVVXHSPQPSLGELTASSITHDSVLLSWTVPAGDFDSFLLQYKDAEGQPQALRMDGGSR
TVTIPNLTPSXGRKRLGPVSTDATTAAEPQEAKPAPEPSLGDLSASPSWPVPAGDFDSFL
LQYKDAEGQPQALPVDGGSRTVTVPNLAPSRRYKFNLYGVSGRKRLGPLSTDATTAPQTE
VPTTQPSLGELTASNVTHDSVLLSWTVPAGDFDSFLLQYKDAETAKPQEPKPEPQPSLGE
LSASDVTHDSVLLSWTVDKGTFDSFLLQYKDAEGKPQALPVDGGSRTVTVPNLAPSRRYK
FNLYGVSGRKRLGPLSTDATTAPREEPAPQPSLGELSASDITHESVLLSWTIDKGTFDSF
LLQYKDAEGQPQALPVDGGSRMVTVPNLAPSRRYKFNLYGVSGRKRLGPLSTDTAPETEQ
PAPQPSLGELSASDVTHNSVLLAWTVPAGDFDSFILQYKDAEGQPQALSMDGGTRTVTVP
NLAPSHRYKFNLYGVSGRKRLGPVSAPELLSAAQQEEPSLGELSASDITHESVLLSWTVP
AGDFDSFLLQYKDAEGQPQALPVDGGSRTVTVPNLAPSRRYKFNLYGVSGRKRLGPLSTD
ATTAAARRDEEPTAQPSLGELSASNVTHESVLLSWTVPAGDFDSFLLQYKDAEGQPQALP
VDGGSRTVTVPNLAPSRRYKFNLYGVSGRKRLGPLSTDATTGQRLQAPPLAMPGVGGGPP
TAQPSLGDLSASDVTHESVRLSWTVPAGDFDSFLLQYKDAEGKPQALPVDGGSRTVTVPN
LAPSRRYKFNLYGVSGRKRLGPLSTDATTGQRLLPGRRPLPR
NT seq
7329 nt
NT seq
+upstream
nt +downstream
nt
ccccggcagaacccggcgcccagcccagcctgggggagctctcagcctccgacgtcaccc
acgactccgtcctgctctcctggaccgtcccggccggggacttcgactccttcctcctcc
agtacaaggacgcggagggccagccccaggcgctgcccgtggacggaggatcccgcacgg
tcactgtccccaacctggcgccttcccgccggtacaagttcaacctctacggcgtgtccg
gccgcaagcgcctgggccccctctccaccgacgccaccacagccgcggagccgcaggagg
caaaacctgcccctgagcccagcctgggggatctctcggcctccgacgtcacccacgagt
ccgtcctgctctcctggactgtcccggccggggacttcgactccttcctcctccagtaca
aggacgcggagggccagccccaggcgctgcccgtggacggaggatcccgcacggtcaccg
tccccaacctggcgccttcccgccggtacaagttcaacctctacggcgtgtccggccgca
agcgcctgggccccctctccaccgacgccaccacaggtcagcggctgcccccgggactcc
gcaccgcgggaggcacccgccccaccccccaaccaagcctgggggagctctcagcctccg
acgtcacccacgactccgtcctgctctcctggaccgtcccggccggggacttcgactcct
tcctcctccagtacaaggacgcggagggccggccccaggcgctgcccatggatggaggat
cccgcacggtcaccgtccccaacctggcgccttcccgccggtacaagttcaacctctacg
gcgtgtccggccgcaagcgcctgggccccgtctccaccgacgccaccacagtcgactcct
tcctcctccagtacaaggacgcggagggccagccccaggcgctgcccgtggacggaggat
cccgcacggtcaccgtccccaacctggcgccttcccgccggtacaagttcaacctctacg
gcgtgtccggccgcaagcgcctgggccccctctccaccgacgccaccacagctgcggcac
cacaggaggaacccagcccccagcccagcctgggggagctctcggcctccgacatcaccc
acgactccgtcctgctctcctggaccatcgacaaggggaccttcgactccttcctcctcc
agtacaaggacgcggagggccagccccaggcgctgcccgtggacggaggatcccgcacgg
tcaccgtccccaacctggcgccttcccgccggtacaagttcaacctctacggcgtgtccg
gccgcaagcgcctgggccccctctccaccgacgccaccacaggtcagcggcgggagccca
gcctgggggagctctcggcctctgatatcacccacgactccgtcctgctctcctggaccg
tcccagctggggacttcgactccttcctcctccagtacaaggacgcggagggccagcccc
aggcgctgcccgtggacggaggatcccgcacggtcaccgtccccaacctggcgccttccc
gccggtacaagttcaacctctacggcgtgtccggccgcaagcgcctgggccccctctcca
ccgacgccaccacagcaccacagacggagcaacctgccccccagcccagcctgggggagc
tctcggcctccgacatcacccacgactccgtcctgctctcctggaccgtcccggccgggg
acttcgactccttcctcctccagtacaaggacgcagagggccagccccaggcgctgcgcg
tggacggggcatcccgcacggtcaccatccccaacctggcgccttcccaccgatacaagt
ggagctgtgggatgtccccagcgccccgggagcccagcctgggggagctctcggcctctg
acgtcacccacgactccgtcctgctctcctggaccgtcccggccggggacttcgactcct
tcctcctccagtacaaggacgcggagggcaagccccaggcgctgcccgtggacggaggat
cccgcacggtcaccgtccccaacctggcgccttcccgccggtacaagttcaacctctacg
gcgtgtccggccgcaagcgcctgggccccctctccaccgacgccaccacagccgcggagc
cacaggaggaacccaccccccatcccagcctgggggagctctcagcctccgacgtcaccc
acgactccgtcctgctctcctggaccgtcccggccggggacttcgactccttcctcctcc
agtacaaggacgcggagggccagccccaggcgctgcgcgtggacggggcatcccgcacgg
tcactgtccccaacctggcgccttcccgtcgatacaagttcaacctctacggcgtgtccg
gccgcaagcgcctgggccccctctccaccgacgccaccacagccacggcgccacaggagg
aagtcaggacgcagctgcgcctggggaagctctcagcagccaacgcagcccacgactccc
tcgacctttcctggactgtggaggaagggaccttcgactccttcatcgtccaataccgcg
acgcagatggcaacccccgggccctgcccgtagatggcgccctgcgctccctccacctcc
acgacctggcgccttcccaccgatacaagatcaacctctacggcgtgtctggccgcaagc
gcctgggccccgtctccaccaacgccaccacagccgcggagccgcagggggcaaaaccca
ccctggagcccagcctgggggagctctcggcctctgacgtcacccacgactccgtcctgc
tctcctggaccgtcccggccggggacttcgactccttcctcctccagtacaaggacgcgg
agggccagccccaggcgctgcgcgtggacggggcatcccgcacggtcaccgtccccaacc
tggcgccttcccccctgcccgtagatggcgccctgcgctccctccacctccacgacctgg
cgccttcccaccgatacaagatcaacctctacggcgtgtctggccgcaagcgcctgggcc
ccgtctccaccaacgccaccacagcaccgcggacggaggaaccccttcttcagatgacca
gagttatgctgccctcctccgacatcacccacgactccgtccggctctcctggaccatcg
acaaggggacctttgattctttcctcctccagtacaaggacgcggagggccagccccagg
cgctgcccgtggacgggggatcccgctcggtcaccgtccccaacctggcgccttcccgcc
ggtacaagttcaacctctacggcgtgtccggccgcaagcgcctcggccccgtctccaccg
acgccaccacagagcagatggacgtgactgggcacgtcgccgcccccaccccggctgcac
ccgtcgtgcgccggggggcccccacggcccagcccagcctgggggatctctcggcctctg
acgtcacccacgagtctgtccggctctcctggaccgtcccggccggggacttcgactcct
tcctcctccagtacaaggacgcggagggcaagccccaggcgctgcccgtggacggaggat
cccgcacggtcaccgtccccaacctggcgccttcccgccggtacaagttcaacctctacg
gcgtgtccggccgcaagcgcctgggccccctctccaccgacgccaccacagccacaacac
cacagaaagagcaacctgccctccaacccagcctaggggagctctcggtctctgacatca
cccacgactccgtcctgctctcctggaccatcgacaaggggaccttcgactccttcctcc
tccagtacaaggacgcggagggccagccccaggcgctgcccgtggacggaggatcccgca
cggtcaccgtccccaacctggcgccttcccgccggtacaagttcaacctctacggcgtgt
ccggccgcaagcgcctgggccccctctccaccgacgccaccacagctgcagcacgacggg
acgaggaacccaccgcccagcccagcctgggggagctctcgccctcctggccagtcccag
ctggggacttcgactccttcctcctccagtacaaggacgcggagggccagccccaggcgc
tgcccgtggacggaggatcccgcacggtcaccgtccccaacctggcgccttcccgccggt
acaagttcaacctctacggcgtgtccggccgcaagcgcctgggccccctctccaccgacg
ccaccacagccacggcgccacaggaggaagtcaggacgcagctgcgcctggggaagctct
cagcagccaacgcagcccacgactccctcgacctttcctggactgtggaggaagggacct
tcgactccttcatcgtccaataccgcgacgcagatggcaacccccgggccctgcccgtag
atggcgccctgcgctccctccacctccacgacctggcgccttcccaccgatacaagatca
acctctacggcgtgtctggccgcaagcgcctgggccccgtctccaccaacgccaccacag
cctcagcaccgcaggaggaggaacccacctcccaacccagcctgggggagctctcagcct
ctaacatcacccacgactccgtcctgctctcctggactgtctcaactggggacttcgact
ccttcctcctccagtacaaggacgcggagggcaacccccaggagctgcctgtggaggggg
gattccgcacggtcactgtccccaacctggcgccttcccgccgatacaagttcaacctct
acggcgtgtccggccgcaagcgcctcggccctgtctccaccgacgccaccacagccgcag
aggtgcaggtagtgtaacacagcccccagcccagcctgggggagctcacagcctccagca
tcacccacgactctgtcctgctctcctggaccgtcccagccggggacttcgactccttcc
tcctccagtacaaggacgcggagggccagccccaggcgctgcgcatggacgggggatccc
gcacggtcaccatccccaatcttacgccttccnccggccgcaagcgcctcggccccgtct
ccaccgacgccaccacagccgcggagccgcaggaggcaaaacctgcccctgagcccagcc
tgggggatctctcggcctcgccctcctggccagtcccagctggggacttcgactccttcc
tcctccagtacaaggacgcggagggccagccccaggcgctgcccgtggacgggggatccc
gcacggtcaccgtccccaacctggcgccttcccgccggtacaagttcaacctctacggcg
tgtccggccgcaagcgcctgggccccctctccaccgatgccaccacagcgccgcagacag
aagtacccaccacccagcccagcctgggggagctcacagcttccaacgtcacccacgact
ctgtcctgctctcctggaccgtcccggccggggacttcgactccttcctcctccagtaca
aggacgcggagaccgcgaagccgcaggaaccaaaacccgagccccagcccagcctggggg
agctctcggcctccgacgtcacccacgactccgtgctgctctcctggaccgtcgacaagg
ggaccttcgactccttcctcctccagtacaaggacgcggagggcaagccccaggcgctgc
ccgtggacggaggatcccgcacggtcaccgtccccaacctggcgccttcccgccggtaca
agttcaacctctacggcgtgtccggccgcaagcgcctgggccccctctccaccgacgcca
ccacagcaccacgagaagaacctgccccccagcccagcctgggggagctctcagcctctg
acatcacccacgagtccgtcctgctctcctggaccatcgacaaggggaccttcgactcct
tcctcctccagtacaaggacgcggagggccagccccaggcgctgcccgtggacggaggat
cccgcatggtcaccgtccccaacctggcgccttcccgccggtacaagttcaacctctacg
gcgtgtccggccgcaagcgcctgggccccctctccaccgacaccgcaccagagacagagc
aacctgccccccagcccagcctgggggagctctcggcctctgacgtcacccacaactccg
tcctgctcgcctggaccgtcccagccggggacttcgactccttcatcctccagtataagg
acgcggagggccagccccaggcgctgtccatggacgggggaacccgcacggtcaccgtcc
ccaacctggcgccttcccaccggtacaagttcaacctctacggtgtgtccggccgcaagc
gcctgggcccagtgtctgctcctgaattactgtccgccgcacagcaggaggaacccagcc
tgggcgagctctcggcctctgacatcacccacgagtccgtcctgctctcctggaccgtcc
cggccggggacttcgactccttcctcctccagtacaaggacgcggagggccagccccagg
cgctgcccgtggacggaggatcccgcacggtcaccgtccccaacctggcgccttcccgcc
ggtacaagttcaacctctacggcgtgtccggccgcaagcgcctcggccccctctccaccg
acgccaccacagctgcagcacgacgggacgaggaacccaccgcccagcccagcctggggg
agctctcggcctccaacgtcacccacgagtccgtcctgctctcctggaccgtcccggccg
gggacttcgactccttcctcctccagtacaaggacgcggagggccagccccaggcgctgc
ccgtggacggaggatcccgcacggtcaccgtccccaacctggcaccttcccgccggtaca
agttcaacctctacggcgtgtccggccgcaagcgcctgggccccctctccaccgacgcca
ccacaggtcagcggctgcaagccccccccttggccatgcccggggtggggggggggccac
ccactgcccagcccagcctgggggatctctcggcctctgacgtcacccacgagtctgtcc
ggctctcctggaccgtcccggccggggacttcgactccttcctcctccagtacaaggacg
cggagggcaagccccaggcgctgcccgtggacggaggatcccgcacggtcaccgtcccca
acctggcgccttcccgccggtacaagttcaacctctacggcgtgtccggccgcaagcgcc
tgggccccctctccaccgacgccaccacaggtcagcggctgctcccaggacgccggcccc
ttcccagga
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