Pelodiscus sinensis (Chinese soft-shelled turtle): 102459947
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Entry
102459947 CDS
T02980
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102459947 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102459947 (CDC40)
Spliceosome [BR:
pss03041
]
Complex C
Other components
Step II factors
102459947 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
102459947
NCBI-ProteinID:
XP_006123259
Ensembl:
ENSPSIG00000012642
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MSAAIAALASYGGSASGSDSDTEGSSRRPALVASRDAVLHLASPPPGPQALAVDAAPEVA
VKEDVETGVHLDPAIKEVQYNPTYDTMFAPEFGPENPFRTQQMAAPRNMLSGYAEPTHIN
DFMFEQQRRTFATYGYALDPSLDDHDVATKYIGSVEEAEKNQGLTVFETGQKKLEKRKKF
KENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKKGRHEDDKPGEEKTIL
HVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQLHVWSGHTKGVSAVRLFPLSG
HMLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNAGTQFLSAAYDRYLKLWDT
ETGQCVSRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDVRSGEIVQEYDRHLGAV
NTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTK
LYSRLKAHDKVCISAVWHPHETSKVITCGWDGLIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagctatcgccgcgctcgcctcctacggcggctccgcctcgggctccgactcg
gacaccgagggaagctcccgccgcccggcgctggtggccagccgggacgcggtgctgcac
ctcgcttcgccgccccctggcccgcaggccttggcggtggacgcggccccggaggtggct
gtgaaggaagatgtggagacgggagtccatctagatcctgctatcaaggaagttcagtac
aatcccacttacgacaccatgtttgcaccagagtttgggccagaaaatccatttaggact
cagcagatggctgcacctaggaatatgctttctggatatgcagaaccaacacatatcaat
gatttcatgtttgaacaacaaagaagaacattcgcaacttatggttatgcattagatcct
tctctagatgatcatgacgttgctactaaatatattggttctgtagaagaagctgaaaag
aatcaaggtttaactgtatttgaaacaggacaaaagaaattggaaaaaaggaagaaattc
aaagagaatgatgcatctaatattgatggcttcctgggaccatgggcaaaatatgtggat
gagaaagaagtagccaaaccttcagaagaagagcagaaagagttggatgaaataacagcg
aaaaggcagaagaaaggcaggcatgaagatgataaaccaggagaggagaaaactatctta
catgtcaaagaaatgtatgactaccaaggaagatcctatcttcatgttcctcaagatgtt
ggagttaacctccgttctacagtgcctcctgagaaatgctatctcccaaagaagcaactc
catgtatggtcaggacatacaaagggtgtcagtgcagtcaggttgtttccactctctggc
cacatgttgctgtcctgctctatggactgtaaaattaaactatgggaagtatacggtgaa
cgaagatgcttacgaacatttattgggcacagtaaagcagttcgagacatctgctttaac
aatgctggaactcagtttcttagtgcagcatatgaccggtatcttaaactctgggacact
gaaacggggcaatgtgtttcaaggttcacaaacaggaaggttccctattgtgtcaaattc
aatcctgatgaagataaacaaaatctttttgtggcaggaatgtcggataaaaaaattgta
cagtgggacgttcgaagtggggagattgtgcaggagtacgataggcatttgggagctgtc
aacactattgtgtttgtggatgagaatagacggtttgtgagtacatctgatgacaagagc
ttaagagtctgggaatgggacattcctgtagatttcaaatacattgcagagccaagtatg
cactccatgcctgcagtcaccttgtctccaaacggaaagtggctggcttgtcaatcaatg
gataatcagattttgatttttggagctcagaacagattcagattaaacaaaaagaaaatc
ttcaagggtcacatggtagcaggttatgcttgtcaagttgatttttcacctgacatgagc
tatgtgatatcgggtgatgcagatggaaaacttaacatctgggactggaagacaacaaaa
ctctacagtaggttaaaagcacatgacaaagtttgtataagtgctgtctggcatccacac
gaaacatccaaagtcatcacatgtggctgggatggtcttattaaattgtgggactga
DBGET
integrated database retrieval system
