Pelodiscus sinensis (Chinese soft-shelled turtle): 102460002
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Entry
102460002 CDS
T02980
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04512
ECM-receptor interaction
pss04514
Cell adhesion molecule (CAM) interaction
pss04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102460002 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
102460002 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102460002 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102460002 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pss04090
]
102460002 (SDC1)
00535 Proteoglycans [BR:
pss00535
]
102460002 (SDC1)
Membrane trafficking [BR:
pss04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
102460002 (SDC1)
CD molecules [BR:
pss04090
]
Proteins
102460002 (SDC1)
Proteoglycans [BR:
pss00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
102460002 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
102460002
NCBI-ProteinID:
XP_025034507
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MQTTDLNLPPEDQDSSGDDDDTFSGSGAGPLTDHSVAAWNVSLERADSSRSAIYTEATVH
QPATPSTENPAEKEMVSSPPASDVVPDEAILSKEEETYVLGSADEKPTIQQPVATSRSPT
THRPALRVTTSQASGIVHITEPGIHGSGPSDVSKETLTPDFATLSEDDVDSPTTIPPRHI
DPIHDKEILSPEESSGDGGDFIFTEDPTILQESELVDSSRDAEAAGTSQGLMDKKEVLGG
VIAGGLIGLLFAVFLVGFMLYRMKKKDEGSYSLDEPKQSNGGYQKPQKQEEFYA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactacagatctaaaccttcctcctgaagaccaggactcatctggcgatgatgat
gatactttctctggctccggtgctggtcccttgacagatcattctgtggctgcctggaat
gtttctttggaacgtgcagattcatcaaggtcagcaatctatactgaagcaactgttcac
cagcctgcaactcctagcacagaaaacccagctgaaaaggaaatggtatcctcaccccca
gctagtgatgtggttcctgatgaggccatcctttccaaggaggaggaaacttatgtactg
ggctcagctgatgagaaacctacaatccagcagccagttgccacgtcaagaagccccact
actcacaggcctgctctcagagtaaccacttcacaagcctcaggcatagtccacataact
gaacctggtatccacggctctggcccgtctgatgtctccaaagaaacacttacccctgac
tttgccactcttagtgaagatgatgttgattctcccactacaattccacccaggcatata
gaccctatacatgacaaggaaattctgtctcctgaagaaagctctggagatgggggtgac
tttatttttactgaagatccaacaatactccaagaatctgaactggttgactcttcaaga
gatgctgaagctgctggaacttctcaagggttaatggacaagaaagaagttctaggaggt
gtcattgctggaggattgataggcctgctatttgcagtgttcctagttgggtttatgctg
tacagaatgaagaaaaaagatgaaggcagctattcgttggatgaaccaaaacaatcgaat
ggaggataccaaaaaccacagaaacaagaagaattctatgcataa
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