KEGG   Pelodiscus sinensis (Chinese soft-shelled turtle): 102460401
Entry
102460401         CDS       T02980                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
pss  Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pss00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102460401 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pss03400]
    102460401 (APTX)
Enzymes [BR:pss01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     102460401 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     102460401 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     102460401 (APTX)
DNA repair and recombination proteins [BR:pss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102460401 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     102460401 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FtsK_SpoIIIE_N FHA
Other DBs
NCBI-GeneID: 102460401
NCBI-ProteinID: XP_006114889
LinkDB
Position
Unknown
AA seq 365 aa
MHHAARVMLTSAIMRVCWLVRKDKCCQRIKLPHLETTVIGRGPETEITDKKCSRQQVQLK
ADCNKGYVKIKQMGVNPASVDLVDIGKDEEVKLKPGQVLHLVNKRYPYTVQFLEDTGASG
TGAEGKTKASKRSYIDSGNSCMENIPEKSMKMEQLDLQDGSSSCMPKNTSNSFSSAHDSS
SSHKEHLGHWSQGLKISMQDPKMQVYKDERVVVIKDKYPKARYHWLILPWDSISSLKSVT
KQHLELLEHMHAVGEKVVQQCLDKDRLEFRLGYHAIPSMSQVHLHVISQDFDSPCLKNKK
HWNSFTTEYFLNSQDVIEMVKTKGKVLVKDGTCELLKLPLRCHMCKQHLPTIPQLKEHLK
KHWPK
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgcatcatgcagcaagggtgatgcttaccagtgcaatcatgcgggtgtgctggctagtg
aggaaagataaatgctgtcagcgaatcaaattgccacacttagaaacaacagtaataggg
cgtggcccagagaccgaaataacagacaagaaatgttcaaggcaacaggtgcagctaaaa
gcggactgtaataaagggtatgtcaagatcaaacagatgggagttaacccagccagtgtt
gatttggtggatattggcaaggatgaagaagtgaagctgaagccaggacaggttctacat
cttgtaaataaacgttatccctacactgtacaattcttggaagacacaggggcctctggc
acaggagcagaaggaaagacaaaagctagcaagcggtcgtacatagactctgggaatagt
tgcatggaaaacatccctgaaaaaagtatgaaaatggagcaactagacttgcaagacggc
agttcaagctgcatgccaaaaaataccagtaattctttctcctctgctcatgacagctct
tccagccacaaggaacacttaggacattggagtcaaggtctgaaaatctccatgcaagac
ccaaaaatgcaggtttacaaagatgaaagggttgtggtcattaaggataaatatcccaaa
gctcgttatcactggctaatcttaccctgggactccatctccagtctaaaatctgtaaca
aaacagcatcttgaactgctagaacacatgcatgctgttggggagaaggtggtccaacag
tgcctggataaagacagactggagttcagactgggttaccatgcaattcccagcatgagt
caggtacatctccatgtaatcagccaggattttgattccccttgccttaaaaacaaaaaa
cactggaattcttttaccaccgagtacttcttaaactctcaagatgtgatagagatggta
aagaccaaaggaaaagttctggttaaagatgggacctgtgagctcctcaagttgcccctc
agatgtcacatgtgcaagcagcacctacctaccatcccacagttaaaagaacatctcaag
aaacattggccaaagtaa

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