Pelodiscus sinensis (Chinese soft-shelled turtle): 102460628
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Entry
102460628 CDS
T02980
Symbol
FAM160A1
Name
(RefSeq) LOW QUALITY PROTEIN: protein FAM160A1
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102460628 (FAM160A1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pss04812
]
102460628 (FAM160A1)
Membrane trafficking [BR:
pss04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
102460628 (FAM160A1)
Cytoskeleton proteins [BR:
pss04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
102460628 (FAM160A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
102460628
NCBI-ProteinID:
XP_014429864
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MMSSSTSRSNNRQAVSLQGVDPETCMIVFKTHWGQVIKILERHDPLKNTQAKYGAIPPDE
ASTVQNYVEHMLFLLIEEQAKDAAMGPILEFVVTENIMEKLFLWSLRREFTDETKIEQLK
IYEMLVTQSHQPLLHHKPILKPLMMLLSSCSGTSTPAEELEXXXXXXXXXXAKDPSILEL
FFHTSEDQGAANFLIFSLLIPFIHREGTVGQQARDALLFIMSLSAENNVVANHIVENTYF
CPVLATGLSGLYSSLPTKLEENGEWHCLLKDDWLLSPALVQFMNSLEFCNAVIQVAHPLI
RNQLVNYIYNGFLVPVVAPALHKVTVEEVMTTTAYLDLFLRSVSEPALLQIFLRFILLHQ
HENVHILDTLTSRINTPFQLCVVSLALFRTLIGLHCEDVMLQLVLRYLIPCNHMMLSQRW
AVRERDCYSVSAAKLLALTPVCCSTGITLTVENQAKDYILWTKASSNAVSRIGFCESMCI
VKYGRTVDISYLQYLWEAEAIILHCMKDCQVWSAPYDGEDPDPDTFIQTLAEENNKNVEH
PMFRLQQRTSSNCSFSQMTPLGEKMQLELEWDDSYDTGISPESDVSSHQPYDDLGTVEKQ
PPAEPPKHIQEMKKNAIMLVKGSYIEESDFQDDVVVYRLCAQKDAQDNFQEETLSTATES
QNAVQSQPIKRSLKNSHPDTNLEDHNRKNSGLPQDVTKEQINQKVVEADPKPDLELKLSP
PEENQNSNVRLLSPDSEEFIAQYDKIIKELDSNTTALEEHKLVTFEPISPVEEEEDFENF
SVDTPSAESMLSPFGPKEDTLPNHPARSHNAAFTGPFISVVLSKLENMLENSLHVNLLLI
GIITQLASYPQPLLRSFLLNTNIVLQPSVRSLYQVLASVKNKIEQFASIQKDFPVLLIQA
QQYLLFRADMSDVTSELLTKDNFQHNSSTGKGRNFSEASHTLLQPFLAHKAKRITALPGI
PLHVRNAILAAALFPEFLKELAALAQEHSILCYKILDD
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctccagtaccagtagaagcaataaccggcaggctgtgagcctgcagggagtt
gacccagaaacatgtatgatagtgtttaaaacgcactggggacaggttataaaaatctta
gagaggcatgaccctttgaaaaatactcaggcaaaatatggggcaattccaccagatgag
gccagcacagtgcagaactacgtggagcatatgctttttttattaatcgaggagcaagca
aaagatgctgcaatggggcctatcctggagtttgtggtcactgagaacataatggagaaa
ctcttcctttggagcttgaggcgggagttcacggatgagacaaaaattgagcagttgaag
atatacgaaatgctggttactcagtcccatcaacctttgctgcaccacaagcccatcttg
aaaccattgatgatgttgctgagctcttgctctggaacatccacaccagctgaggagctg
gaanncnnnnnnnnnnnnnnnnnnnnnnnnntagccaaggacccttccattctggaactt
tttttccacaccagcgaggaccaaggagctgccaacttcctcattttttcccttttgatt
cccttcatccatcgggaaggaacagtaggtcagcaggctcgtgatgctctgctcttcata
atgtccctgtcagctgagaacaatgttgtcgcaaaccacatagtagaaaacacctacttt
tgtcctgtactagcaacgggattgagtggcctctattcatctttgcctacaaagttggaa
gaaaatggagaatggcactgtctgctgaaagatgactggctcctgtccccagctcttgtt
cagttcatgaattccctagagttttgcaatgcagtaatacaggtggcacatcccttaatt
cgtaaccagcttgtgaactacatttacaatggttttttggtgccagtagtggctcctgca
ctccataaggtgactgtggaggaggtaatgacaacaactgcatacctggatctcttttta
cgcagtgtttctgagccagctctacttcagattttcctgcgtttcatcctgctgcatcag
catgagaatgtgcacatcctagatacgctcacaagccggatcaacactccatttcagctc
tgtgtggtatctttggcattgttcagaacactcattggtttacattgtgaagatgtgatg
ttacagctagttttaaggtatctgatcccttgtaatcacatgatgctgagtcagagatgg
gctgtgagagaacgagactgttattcagtatctgctgctaaactacttgctctaactcca
gtctgctgctctactgggattacactgacagttgaaaaccaagcaaaagattacatccta
tggacaaaggcctcatccaatgcagtttctagaattggcttttgtgaatccatgtgcatt
gtgaaatatggaagaaccgtggacatcagttacctgcaatacctgtgggaagctgaagcc
atcattctccactgcatgaaagactgccaggtttggtctgccccatatgatggggaagac
cctgacccagacacctttatccaaacactggctgaggagaacaataaaaatgtggagcac
cccatgttccggctccagcagcgaacttccagtaactgcagcttctctcaaatgactcca
ttgggagagaagatgcagttggagctggaatgggatgacagctatgacacaggaatttct
cctgagtctgatgtgagttcacatcagccttatgatgacctaggaactgtagagaaacaa
ccgcctgcagaaccaccaaaacacattcaagagatgaagaaaaatgcgatcatgcttgta
aaagggtcttacatagaggaatcagattttcaggacgatgttgtggtttacaggttatgt
gcccaaaaggatgctcaggataacttccaggaggaaactttaagtacagcaactgaatct
caaaacgcagttcaaagtcagcctattaagaggtctttgaaaaactctcatccagataca
aacttagaggatcacaataggaaaaattcaggcttacctcaggatgtaacaaaggaacag
ataaaccagaaagttgttgaagcagaccccaaaccagacttagagctgaaactctctcct
ccagaagaaaatcaaaactcaaatgtgaggctgttgagtccagatagtgaggaattcatt
gcacaatatgacaaaattattaaagaactggattctaacacaacagccttggaggagcac
aaattggtgacatttgagcctatatctccagtagaagaggaagaggactttgaaaatttt
tcagtggacactccatctgcagaaagtatgctatctcctttcgggccaaaggaggatacg
ttgcccaaccatcctgcaagaagccacaatgctgcatttacagggccatttatcagtgta
gtgctgtcaaagctggaaaatatgttggagaattccttgcatgttaacttgctgcttatt
gggattattactcaactggccagttacccacaacctcttcttcgttcttttctgctcaat
accaacattgtacttcagcctagcgtacggtcattatatcaggtgctggcgtctgtgaaa
aataaaattgaacaatttgcatccatccagaaagattttccagttcttcttatacaggcc
caacagtacttgcttttccgagcagacatgtctgatgtgacatcagagttactgaccaaa
gataacttccagcacaacagcagcacagggaaaggaagaaatttttctgaggcttcccac
actctgctccagcctttcttggcacataaagccaagagaataacggctcttcctggtatt
cccttgcatgtgaggaatgccatactggcagctgctctttttcccgagtttctgaaggag
ctagcagctcttgcacaggaacattccatcctatgttacaaaatactggatgattga
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