Pelodiscus sinensis (Chinese soft-shelled turtle): 102460702
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Entry
102460702 CDS
T02980
Symbol
TRPA1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pss04040
]
102460702 (TRPA1)
Ion channels [BR:
pss04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102460702 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Ferritin
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102460702
NCBI-ProteinID:
XP_014433261
Ensembl:
ENSPSIG00000018137
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MKRALLKMFQPREKAACGFYQGVVCEADAASLASQDVFKMISDGSACRLRSFIKKNRSGL
SKLDELNATPLHHAAGAGQIELMEMIIDDSSNEALNVMDSFGNTPLHWAAKRNQAESVKL
LLSRGANPNILNSSMMAPLHLAVQSLHNEIVKVLVQHSSTDVNLEGETGNTPIIVACYKE
NPEALTLLLENGGKLCKSNKTGCMPVHAAAFSGAKACLEIILKKGEELGHSAESHINFTN
NGKCSPLHLAVQSGDLEMIKMCIEYGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSYA
GDESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSLDIEGRSPLLLATTCASWK
IVNLLLSKGANVFLKDQLGRNFLHLTVLQPGGLQHLDGKFLQMKYIKDLVVEEDDEGCTP
LHYACRQGVPFSVNSLLDLNVSVYSKSRDKKSPLHFAASYGRINTCQQLLRGMNDTRLLN
EGDKKGMTPLHLAAQNGHEKVVQFLLKKGALFLCDYKGWTALHHAAFGGYTRTMQIILDT
NVKSTDRVDEEGNTALHLAAKEGHAKAVRLLLDCGAKIILNKASASFFHEAIHNRRKDVV
SAVILNKRWEEAVTTFSHSSTSNKCPLLEMIEYIPESLKLVLDNCMIESSEEKSSQDFYI
EYNFRYLQCPLILNKKIKAGEEIVYEPLTTLNAMVRHNRMELLNHPVCKEYLLMKWMAYG
FRAHIMNLGIYSLGLVPLTLLITRIDSHQTGPFEYEDSYFIRVCMCLVFVMSLFGICKEI
FQLFQQKLKYLLDCSNLLDWTIYTSSIMFVSSLFVNIPAHLQWECGAIAVYLSWMNFLLY
LQRFENYGIYIVMFWEILRTLLRIAVVFFFLILAFGLSFFVLLCSQHHYKTPLLSVMQTF
AMMLGDINYHEAFLDPLLSNNLPYPFLSYAVLIIFTLLIPILLMNLLIGLAVGDIAEVQK
YAALKRIAMQVNLHTNLEKKLPYWFLSRVDQESITVYPNRPRYCGFMFFLLXSVFNYCFG
YEDSVTDAQSADTTLELEILKQKYRLKDMSTLLEKQHELIKLIIQKMEIVSEAGDEDSND
LFQHKFRKQQLEHMNSKWDTVLKAVKSKCP
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgccctgctgaagatgttccagccgcgggagaaggcggcgtgcggcttctac
cagggggtcgtgtgcgaggccgatgctgcctccctagcctcgcaggacgtctttaagatg
atttcagatggaagtgcttgcagattacggagttttattaagaaaaatcgttctggacta
agcaaattggatgaactgaatgccactccattgcatcatgctgcaggagcaggtcaaata
gaattaatggagatgattatagatgattcttccaatgaagcactcaatgtgatggattcc
tttggaaacaccccactgcactgggccgccaaaagaaaccaggctgaaagtgttaaatta
cttctcagcagaggagctaaccccaacattctaaactccagtatgatggcacctcttcat
ctagctgtccagtcccttcacaatgaaatagttaaggtgttggtccaacacagcagtaca
gatgttaatttggaaggagaaactgggaacacacccataatagtagcatgttacaaggaa
aatcctgaagcactgacacttctgcttgaaaatggaggaaagttatgtaaatcaaacaaa
actggatgtatgcctgtccatgcagctgcattttcaggtgcaaaagcatgtctggaaatt
attttaaaaaaaggtgaagagttaggccattctgctgaaagtcacatcaattttaccaat
aatggaaagtgcagtcctctccatctggcagttcagagtggagacttggaaatgattaaa
atgtgcattgaatatggagcacaaattgatctgaaacagaatgaaaaatgcacagctctt
cattttgctgccacccaaggagcaactgagattgttaaattaatgatgtcatcctatgcc
ggtgatgaatctattattgatgcagtagatgggaataaggaaacactgcttcataggact
gcattatttgatcactatgaactggcagagtatttaatttcaatgggagcaaatattgat
agtcttgacattgaaggtcggtcaccacttctactggctactacctgtgcatcatggaaa
attgtgaatttattactctcaaaaggagcaaatgtgttcttaaaagatcagcttggtcgg
aatttcttgcacttgacagtacttcagcctggaggactacaacatctggatgggaaattt
ctgcagatgaaatatattaaagatcttgttgtggaagaagatgacgaggggtgcactcca
ctacattacgcatgcagacaaggagtgcccttctctgtaaatagcttgctcgacttgaat
gtttctgtctattctaaaagtagagacaagaagtctcccttgcattttgcagccagctat
gggcgcatcaatacctgtcagcaacttctaagaggcatgaatgacacaaggcttttgaat
gaaggtgataagaagggaatgactccccttcacttggcagcccaaaatggtcatgaaaag
gttgtgcaatttctgctgaagaagggtgccctcttcctatgtgattataagggctggaca
gccctgcaccatgctgcctttggaggatatactcgcacaatgcagataattttggatact
aatgtgaaatctactgacagagtggatgaagaggggaacacagctcttcatcttgctgca
aaagaaggacatgcaaaagcagtgagactgcttcttgactgcggtgccaaaataatcctc
aacaaagcatcggcttcttttttccatgaagcaatacacaataggagaaaagatgtagtg
tctgctgttattctcaataaaaggtgggaagaagctgtaacaacattttctcattcttct
acttccaataaatgtcctttgttggaaatgattgaatatattcctgaatccttaaagttg
gttttggacaactgtatgattgagtcttcagaggaaaagtcaagtcaagacttctatatt
gaatataacttcaggtatcttcagtgtccactaatacttaacaaaaaaataaaggcaggt
gaagaaattgtctacgaacctcttaccaccctaaacgctatggtacgtcataaccgcatg
gaacttctcaatcatcctgtatgtaaagaatatttgctcatgaagtggatggcctatggg
ttccgagcacatattatgaacctcggcatatattctctaggtctcgtgcctctgactctt
ctgataacccgcatagactcccaccaaacaggaccatttgagtatgaggattcatacttc
ataagagtatgtatgtgtttagtttttgtcatgagtttatttggaatctgcaaagagata
tttcaactctttcaacagaaattgaagtacttgttggattgctctaatctattagactgg
acaatttatacttcaagcataatgtttgtgtcttccttatttgttaatatcccagctcac
ttgcagtgggaatgtggagcaattgcggtatatttatcttggatgaactttttgctttat
cttcagagatttgaaaactatggaatctacatcgtaatgttctgggaaattctgaggact
ctgcttcggattgctgttgtgttcttttttctaatattggcctttggactcagcttcttt
gtccttctatgttcacagcaccattacaagactcccctcctttctgtaatgcagacattt
gctatgatgctgggagatattaattatcatgaggcttttcttgatccgcttctaagtaat
aatttgccctatcccttcctgagttatgcagttctcattatcttcaccctgcttattcca
attcttcttatgaacttgttgattggtttggctgttggagacattgctgaggtgcagaaa
tatgctgcactgaaaaggattgcaatgcaggtcaatcttcacacgaatttagaaaagaag
ctgccgtactggttcctaagtcgagtggaccaggaatcaatcaccgtgtatcctaatagg
ccaagatactgtggattcatgttctttcttctttagagtgtgtttaactattgctttggt
tatgaagactctgtcacagatgctcagagtgctgacacaactttagaactggaaatcttg
aagcagaaatacaggcttaaggatatgtcaacactcttggaaaaacagcatgagctcatt
aaactgatcatacagaaaatggagatagtatcagaagctggggatgaagacagtaatgat
ttatttcagcataagtttaggaaacagcagttagaacacatgaacagtaaatgggatact
gtgttaaaagctgtaaaatcaaaatgtccttag
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