Pelodiscus sinensis (Chinese soft-shelled turtle): 102460722
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Entry
102460722 CDS
T02980
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
102460722 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102460722 (PEX6)
Membrane trafficking [BR:
pss04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
102460722 (PEX6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DPBB_PEX6
PEX6_vert_N
AAA_lid_3
AAA_16
AAA_22
AAA_25
AAA_5
PEX6_4th
AAA_33
RuvB_N
DUF815
TsaE
NPHP3_N
Mg_chelatase
RNA_helicase
Vps4_C
nSTAND3
IstB_IS21
TIP49
AAA_2
Parvo_NS1
AAA_28
AAA_14
AAA_24
PhoH
Motif
Other DBs
NCBI-GeneID:
102460722
NCBI-ProteinID:
XP_075782015
Ensembl:
ENSPSIG00000002357
LinkDB
All DBs
Position
3:complement(199848571..199878366)
Genome browser
AA seq
923 aa
AA seq
DB search
MALAVVRPLEARAAELPAGGAVLLAPGPLAARLGGPALVLAVRPAGRAGAQPALLGAALR
AGGPGGAELWLRGGWRRRLGLAAGRRVALWPVRPAALGWALRAGPARRGEGPGAGPPVVS
LFARPAAPGPARLRALRGDPAPWGLAAEAGAGAGAALWVTRRGLRGLGLFQGEWVRLSRE
PPGPGGAHLAAVRALQPRWDFPQEPREPPEGAAVIPAGLAFNLACDPLGGTALLVQRYGD
APGMEETKGSRSLLSIPPFAKELHIEIVSSPAYSTRGVYDNILHQHFQTPRIVQGGDILC
VPTAGHPEFLEGNSEKFLSWPELYFKVKGIVGAVEGEQSLGYLADIQNTSLYLAGSTNSA
VPSSPSRHGHELWSSLSPSGLSDVVKQLCDALRPHLSSRGTALCAAGSVLLAGPSGGGKM
TAVRAACSCLHLHLFKVDCVSVCGDTSGATETKLRSAFAQAELFWPCVLLLKDIEVLGRD
RDGLGEDSRVVATLRHLLLDRDAGSSGYPVLVVATTCRPRDVLADVQTAFLHELTVPAPS
EEQRRAILSALTAGLPLGKDVSLARLARRSAGFVLGDFCALLAQASRAACSRILTSSFPG
GLSEDEERDFCAAGFPVLAEDFNVALDQLHEAHLQAAGAPKIPAVTWQDVGGLQEAKKEI
LDTVQLPLEHPELLSWGLRRSGLLLYGPPGTGKTLLAKAVATECTMTFLSVKGPELINMY
VGQSEGNVREVFARARAAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLH
STRDVFVIGATNRPDLLDPALLRPGRFDKLVYVGMNEDRESQLRVLSAITRKFKLDPSVS
LAGVLEQCPAQLTGADLYALCADAMMGAVKRKVDWIEEGLDTESSDLVVTMEDFGQAARR
LQPSVSEQELLRYSAVQQKCAAR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggcggtggtgcggcccctggaggcccgggcggccgagctgccggcggggggg
gcggtgctgctggccccgggcccgctggcggcgcggctgggcggcccggcgctggtgctg
gcggtgcggcccgcgggccgggccggggcgcagccggcgctgctgggcgcggcgctgcgg
gcgggcgggccgggcggggccgagctgtggctgcgcggcggctggcggcggcggctgggg
ctggcggcggggcggcgcgtggcgctgtggccggtgcggccggcggcgctgggctgggcg
ctgcgggcggggccggcgcggcggggggaggggcccggcgcggggccgcccgtggtgtcg
ctgttcgcgcgccccgcggctccgggcccggcccggctgcgggcgctgcgcggggacccg
gcgccctgggggctggcggccgaggcgggggccggggcgggcgcggcgctgtgggtgacc
cggcgcggcctgcgcggcctcggcctcttccagggcgagtgggtgcggctgagccgggag
ccgcccgggccgggcggggcgcacctggccgccgtgcgggccctgcagccccgctgggac
ttcccgcaggagccccgggagccgccggagggcgcggccgtcatcccggccgggctggcc
ttcaacctggcctgcgacccgctgggcgggaccgccctgctcgtccagaggtatggggat
gctcccggtatggaagagacaaagggaagtcggtccttgctatccataccaccctttgca
aaggagctgcacatagaaatagtctcctccccagcctacagcaccagaggagtctatgac
aatattcttcaccagcacttccaaacacccaggatagtccaggggggtgatatcctgtgt
gttccaactgctggacatccggagtttttggaaggaaattcagagaaatttcttagctgg
ccagagctgtacttcaaggtgaaggggatcgtaggagcggtggaaggagagcagtctcta
gggtacctggctgacatccagaacacgtctctgtacctggcgggctcaactaacagtgct
gtgccctcttccccgagccgccatggccacgagctttggagcagcctgtctccctccggg
ctctctgatgtggtgaaacagctctgtgatgctctccggcctcacctgagcagcaggggg
accgcactctgtgcagcaggcagcgttctactggcagggcccagcggcggggggaaaatg
acggctgtgcgtgctgcatgcagctgcctccatctccatttgttcaaggtggactgcgtt
agcgtttgtggagataccagtggcgctaccgagacgaagctccggtctgccttcgcccag
gccgagctcttctggccgtgcgtgctcctgctgaaggacatagaggtcctggggcgagac
cgagatggcctgggagaggactccagagtcgtcgccacgctacggcacctcctcttggac
agggatgctggatcgagcggataccctgtcctggtggttgccaccacgtgcaggcctcgg
gacgtcctggccgacgtgcagacagcgttcctgcacgagctgacggtcccagccccttca
gaagagcagcggcgggccatcctgagcgcgctcactgccggccttccgctgggcaaggat
gtgagcctggccagactggcgcggagaagtgcgggcttcgtgctgggagatttctgtgct
ttgctggcccaagccagccgggcggcatgcagcaggatactgacctcaagtttcccgggg
gggctgagtgaggacgaggagagagatttttgcgctgctgggttcccggtcctcgcggag
gattttaacgttgcgttggatcagctgcacgaggctcatttgcaggccgcgggagccccg
aagatccctgcggtcacgtggcaggacgtgggcgggctccaggaggcgaagaaggagatc
ctggacaccgtccagctgcccctggagcaccccgagctgctgtcttgggggctgcgccgc
tccggcctcctgctctacgggcctcctgggacagggaagaccttgctcgccaaagctgtg
gccactgagtgcaccatgactttcctcagcgtgaaggggccggagctcattaacatgtac
gtggggcagagtgaagggaatgtgcgcgaagtgttcgccagagccagggcagctgccccc
tgcattatcttctttgatgaactggattccttggcacccaaccgtgggcgcagcggagac
tcgggcggcgtcatggaccgggtcgtctcccagctgctagcagagctcgatgggcttcat
tccaccagagacgtatttgtgatcggcgccaccaacagacctgacctcctggacccagcg
ctgctccggcctggcaggtttgacaagctggtctacgtcggcatgaacgaggaccgggag
tctcagctgcgggtgctgagcgccatcacccggaagttcaaactggacccttcggtgagt
ctcgctggggtcctcgagcagtgccccgcacagctgacgggcgcagatctgtacgcgctc
tgcgcagacgccatgatgggcgccgtcaaacggaaggtggactggatcgaggaagggctg
gacacggagagttcggatctcgtcgtgaccatggaggactttggacaagcggcccggagg
ctgcagccgtccgtgtcggaacaggagctgctccgctacagcgccgtccagcagaagtgt
gctgcccgctag
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