Pelodiscus sinensis (Chinese soft-shelled turtle): 102460860
Help
Entry
102460860 CDS
T02980
Symbol
ATG2B
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04136
Autophagy - other
pss04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102460860 (ATG2B)
04136 Autophagy - other
102460860 (ATG2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102460860 (ATG2B)
03029 Mitochondrial biogenesis [BR:
pss03029
]
102460860 (ATG2B)
Membrane trafficking [BR:
pss04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
102460860 (ATG2B)
Mitochondrial biogenesis [BR:
pss03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102460860 (ATG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
102460860
NCBI-ProteinID:
XP_006133768
Ensembl:
ENSPSIG00000012160
UniProt:
K7G0T7
LinkDB
All DBs
Position
Unknown
AA seq
2077 aa
AA seq
DB search
MPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGSLAQVPLDKWCLNEVL
ESADAPLEVTEGFIQSISLSVPWGSLLQDNCALEVKGLEMVFRPRPRLASGSEPMYWSSF
MTSSMQLAKECLSQKLTDEQGEGTQPFEGLEKFAETIETVLRRVKVTFLDTVLRIEHVLE
TSKSGSALEIRIEKTMYCDETADEHSGINVNQPTAFAHKLLQLSGVSLFWDEFPASAKSS
PVCSATQLAAEPKLSPSWNPKIVYEPHPQLTRNLPQVAPSDPVQISRLIGRMKLSLTLKQ
HEVLPGAKLDVDGQIDSIHLFLSPRQVHLLLDMLAAIAGPENPSRIELSNKDRKNRPMQQ
EDEYRIQMELKRYLRKESLSAGASSEQSFYDTETTRTPSSREEEVFFSMADMDMSHSLSS
LPPLGDPPTMDLDLSLTSTYTTTPAGSPLSATVLQPTWGDFHDPNKQDPPQPPRGTSFSP
IIIHQTPLRRTSLPSRSVSMDESRPELLFRLALGTFSVSVLHIDPLPPPETSLNLNPLTP
MALDFFTRIEKIDPVKFSTEDFLSFREVFAEACSHDHLRFIGTGIKVSYEQRQKSASRCL
STDLSIGHMELLECLFSTDSCSSQPHYTELLTFHSENGNDTHPLPCLQLHYKHTDNRGPQ
GSQGRLSCVPQKAELQIKLSPVFCELDISIVDRLNSLLQPQKLTTVEMMASHMYTSYNKH
ISLHKAFTEVFLDDSRTPANCRVSVQVISPALDLSVRFPIPDLRSDQERGPWFKKSLQKE
ILHLEFTDMEFKTEFIGGSTPEQVKLELTFKELAGLFEEDKAESSIKFFQVSSSIDGDMI
SSDNFDWPRIVLKINPLAVHSILERIAAEEEEGDGNFQEEEEGGSHSLKDVCDLRRPEPS
PFSSRRVMFENEEMVMPGDAVEMSEFQDKAVSNSHYVLELMLPNVHLTLPNKDFYEKLYN
RISNDLLLWEPTAPSPVETFENISYGGGLSVASQLINTFSKDSFSQFRSTIHYDDESGSE
EETLQYYSTVDPNYRSRRKKKLELQNKNTQSSLSVLLNVNHGLVSVFTDVKQDGGNILEG
KRGEFWFEFSSGSLFCVTKYEGFEDKHYICLHSGSLSLYHQGVVDGVVPLSEIRLPSTTR
PHWLEPTIYFSEEDGLSRTSSDGVGVDCLSMLSVAVKIQSNKSESNTKEFLVAVGLRGAT
LQHRVLPSGLSWHEQILYFLNISDEPVLGYNPPASITTFHIHLWSCALDYRPLFLPTRSL
LTVETFSISSNVALDKSSSTLRIILDEAALYLSDKCNTVTVNLHRDYIRVMDMGLLELTI
TAVKPGSDGERVKPRFELHSSSDIIHIRTCSDSCAALMNLIQYIASYGDLHPPSKTEIKR
GVVKQKTKADASSQPSSQGLVLAEAEQQILRDLMSDAMEEIETHQAASPMRPQSNGILDE
KSQAQEPACSDLFLFPDESGSISQEPSPTYTTFTHRLIKEAMGDIPTENDDFCILFAPKT
VVSEKEEEPVVKIMVDDAILIKDNHFSLPVKKTDTSKAPLHFPIPLVRYVVKEISLIWHL
YGGKDFGTASTTSPAKSFISPHSSPSHTPTRHERSTCGGRGRNPDFLMEIQLSKVKFQHE
VYPPGGPECESSLLEQPVSRQVFVVQDLEIRDRLATSQMNKFLYLYCSKEMPRKAHSNML
TVKVLHVRPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSSEVELLMTPDPEV
KKSPGADVTCSLPKHVSSFKDPSPVISFSLHKQRSQSDSVDSVDIVNGEDHHFSQEDTSF
SDQPVFFREFRFTSEVPIRLDYHGKHVSMDQGTLAGILIGLAQLNCSELKLKRLCYRHGL
LGVDKLFSYAITEWLNDIKKNQLPGILGGVGPMHSLVQLVQGLKDLVWLPIEQYRKDGRI
VRGFQRGAASFGTSTAMAALELTNRMVQTIQAAAETAYDMVSPGPSCIETKKIKRFSRHR
LAHQPVDLREGVAKAYNVVKEGITDTAQTIYETAAREHENRGVTGAVGGVLRQIPPAVVK
PLIVATEATSNVLGGMRNQIRPDVRQEESQKWRLGED
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
atgccttggcctttctcagaatccatcaagaaaagggcctgcaggtacctgctgcagagg
tacctgggtcacttcctgcaggagaagctcagtctggagcagctcagcctagatctgtac
cagggtactggatccctggcgcaagtccctctggataaatggtgtcttaatgaggttctg
gaatcagcagatgcacctctagaagtcactgaagggtttatccagtcaatttctctgtct
gtcccctgggggtctttgctacaggataactgtgctctagaagtgaaaggattagagatg
gtcttcaggccaaggcctcgtcttgcatctggttcagagcctatgtattggtcaagtttt
atgaccagtagtatgcaacttgcaaaagaatgtcttagtcaaaaactgacagatgaacaa
ggggaagggacccaaccttttgaagggcttgagaagtttgcagaaactattgaaacagtt
ctaagaagagtgaaagttacctttttagatactgttttgagaattgaacatgtgctggaa
acttctaaaagtgggtctgcacttgaaatccgaattgagaaaactatgtattgtgatgaa
actgctgatgaacactctggaattaatgtaaatcagcccacagcttttgctcacaagtta
cttcagctctcaggtgtctctctcttctgggacgagtttccagcatcagcaaagtcctct
ccagtgtgttcagctacacagttggctgccgaaccaaagctttccccgagctggaatcca
aaaattgtgtatgagccacatccacagttaactagaaacttgccacaagttgctccctct
gatcctgtacaaataagtaggctgattggtaggatgaagttgagccttacattaaagcaa
catgaagtacttcctggagctaagctggatgtcgatggccaaatagactctatacaccta
ttcctgtcaccaaggcaggtacatcttctgttggacatgttagcagccattgctggacca
gagaaccccagcaggatagaattgtcaaataaagatagaaagaaccgaccaatgcaacag
gaagacgagtatcggattcagatggagctgaagcgttacttaagaaaagaatctttgtca
gcaggagcatcgtctgagcagagcttttatgatacggagaccaccagaacgccttctagc
cgtgaagaagaagttttcttctcaatggctgacatggacatgtcgcacagtctctcctct
cttccacctcttggagacccaccaactatggatctagacctgtcactaactagtacatat
actactacaccggcaggatctccattgagtgcaacagtgcttcagccaacttggggtgat
tttcatgaccctaataaacaagatcctccacagccaccaagaggtacatcattttcaccc
attattattcaccaaacacctttaagaaggacttcccttccatccagatctgtttcaatg
gatgaatctaggcctgaacttctttttagactggcactgggcactttctcggtatctgta
cttcacattgaccctcttccaccacctgaaacatcactgaaccttaacccactgacacca
atggcattggatttctttacccgaatagaaaagattgatccagttaagttttcaacagaa
gattttctgtccttccgagaagtatttgcagaggcttgttctcatgaccaccttagattt
ataggtactggcatcaaagtctcttatgaacaaagacaaaaatctgcttctcgatgctta
agtacagatttgtccattgggcatatggaactattggaatgtcttttctctactgactct
tgctccagtcaacctcactatacagagctcctaacatttcattctgaaaatggaaatgat
acacatcctcttccatgccttcagctccattataagcacacagataacagaggacctcag
ggtagtcaaggaagactgagctgtgttccacagaaagcggaattacaaatcaagttaagt
ccagtattttgtgaactggatatcagtattgtagacagactaaattctttgcttcagccg
cagaaactaaccactgtagagatgatggcatctcacatgtacacatcttacaacaaacac
attagtctgcacaaggcatttactgaagtttttctggatgattcacgtacacctgcaaac
tgcagggtttctgtgcaagtcatttcaccagcattagatctttctgttcgtttccctata
cctgacctacgatcagatcaggaaagaggaccatggtttaagaaatcacttcagaaggaa
atccttcatcttgaattcacagatatggaattcaaaactgaatttataggaggttcaact
ccagagcaagttaaattagagcttaccttcaaagaattagcaggcttatttgaagaagat
aaagcagaatcttcaataaaattctttcaagtgtccagtagcatagatggagacatgata
tcatctgacaactttgattggccacggattgtactgaaaataaacccattggctgtgcac
tcaattcttgaaaggatagcagctgaagaagaagagggtgatggaaactttcaagaggaa
gaggaaggaggatctcattctcttaaagatgtctgtgatctcagaaggccagagccatct
cctttttcctctcgtagggtcatgtttgaaaatgaagagatggtgatgccaggtgatgca
gttgagatgtcggagtttcaggataaagcagtcagcaattctcattatgtactagaactc
atgttaccaaatgttcacttaacactgccaaataaggatttttatgagaaactatacaat
aggatcagcaatgacttattattatgggaacccacagctccatcacctgtagaaacattt
gagaatatttcatatggtggtggactctcagtggccagccaactgatcaatactttcagt
aaagacagctttagtcaattcagatctacaatacattatgatgatgagagtggatctgaa
gaggaaactctacaatattattccacagttgatccaaactatcgttcacgtaggaaaaaa
aaacttgaattgcaaaacaagaacacacagagctctctctctgttcttttaaatgttaat
catggattagtgtcagtattcacagatgtaaagcaggatggcgggaatattctggaaggc
aagcgtggtgaattctggtttgagttcagcagtggttcattattctgcgtgactaaatat
gaaggttttgaagacaaacattacatctgtcttcattctggcagtctcagtttatatcat
caaggtgtggtggatggagttgtccctctatctgaaatacgacttcctagcacgacacgt
ccacattggttagaacctaccatttatttttctgaagaagatggtctcagtaggacttct
tcagatggtgtcggagtggactgtttaagtatgctgtctgttgcagtgaaaatccagtca
aataaatcggaaagcaatacaaaggaatttctagttgctgttggtctgagaggagctact
ctccaacacagagtattgccttcaggtttaagctggcacgaacagattttatattttttg
aatatttctgatgaacctgttttgggatataatcctccagcttccattacaacttttcat
atacatctctggagttgtgctcttgattacaggcccttgtttttgccaaccagatctcta
cttactgttgaaactttcagcatttccagtaatgttgcattggataagtcctcttctact
ctcagaataatcttggatgaggctgctttatatttgtctgacaagtgcaacactgttaca
gtaaatctgcacagagattatattcgtgttatggatatgggactcttggaactgactata
acagcagtaaaaccgggttctgatggagagagagttaagcctcggtttgagctacacagt
tccagtgatataatccatatccgaacatgctcagattcttgtgctgcactaatgaatctt
atacagtatattgcgagttatggtgatttgcatccacctagcaagactgagattaaacgt
ggagttgtcaagcagaaaaccaaggcagacgcctctagccaaccatcttcccaaggacta
gtccttgcagaagcagagcaacagattttacgggatttgatgagtgatgctatggaggaa
attgagacccatcaagctgcttcccccatgaggccacagtctaatggaatcttggatgaa
aaatctcaagcccaggaaccagcttgctcagatctcttcctgtttccagatgaaagtgga
agcatttcacaagagccaagtccaacatatactacattcactcaccgcctgattaaagag
gcaatgggagacatacctactgaaaatgatgacttctgcatcctttttgctcccaaaact
gttgtttctgagaaagaggaagagccagtagtgaaaataatggtggatgatgcaatcctg
ataaaagacaatcatttcagcctgcctgtaaaaaagacagatacgagtaaagccccccta
cattttcctatccctttggttcgctatgttgtgaaagaaatctctcttatttggcatctt
tatggaggaaaggattttgggactgcatctactacttctccagctaaaagttttattagt
cctcatagttcgccttctcacacaccaacaagacatgaacgtagcacgtgtgggggaaga
ggaaggaacccagacttcttaatggaaatacaattaagcaaggtgaaattccagcatgag
gtatatcctccaggggggccagaatgtgaatctagtctgttggagcagccagtgtcccgg
caggtttttgttgttcaagaccttgagatcagagatcgcttggctacatcacagatgaat
aaatttctctatctgtactgtagtaaggagatgcccagaaaagcacattctaatatgcta
acagttaaagtgttacatgttcgtccagagtctggcagatcaccacaggaatgctgttta
cgtgtgtcactaatgccacttcgcctcaatattgatcaggatgccttgtttttcctgaag
gattttttcactagtttgtcttcagaggtggaactcttaatgactccagatccagaagtt
aaaaagtctcctggtgctgatgtaacttgtagtttgcccaagcatgtaagcagcttcaag
gacccaagcccagtcatttctttctcattacacaagcaaagaagccaaagtgatagtgtt
gattctgtggatatcgttaatggagaggaccatcatttttcacaggaagatacatcattc
agtgatcaaccagtctttttcagagaatttcgatttacatcagaagttccaatacgtctt
gattaccatggcaaacacgtttcaatggatcagggtacgttagctgggattttgattggt
cttgcacaattaaactgctcagagttaaagttgaagagactttgctatcgacatggtttg
ttaggtgtggataagctgttctcttatgctatcactgaatggcttaatgacataaagaaa
aatcagctaccaggaatcctgggaggagtggggcctatgcattctttagtgcagttagtt
caaggtctgaaggacttagtatggttaccgatagaacagtaccgaaaggatggtcgtatt
gtaagaggctttcaaagaggagctgcttcctttggtacttccactgcaatggcagcttta
gagctaacaaacagaatggttcaaaccatacaggcagcagcagaaactgcttatgacatg
gtctccccaggtcccagttgtattgagacaaaaaagatcaaaagattctctcggcatcgc
ttagctcatcagccagtagacctacgagaaggggtagccaaagcatacaatgtggtaaaa
gagggaattacagacactgcccagaccatctatgaaactgctgctcgagagcatgagaac
agaggggtaacaggcgcagtaggaggagtccttcgccaaattccaccagctgtggtgaaa
cctcttattgttgcaacagaggcaacctcaaatgttttaggtggaatgagaaaccaaatc
cggccggatgtacgtcaagaagaatcacagaaatggcgccttggggaggactga
DBGET
integrated database retrieval system
