Pelodiscus sinensis (Chinese soft-shelled turtle): 102460882
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Entry
102460882 CDS
T02980
Symbol
PCDH9
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9
KO
K16498
protocadherin delta 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102460882 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pss01009
]
102460882 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pss04515
]
102460882 (PCDH9)
Protein phosphatases and associated proteins [BR:
pss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102460882 (PCDH9)
Cell adhesion molecules [BR:
pss04515
]
Cadherins
Protocadherins
102460882 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
V_ATPase_I
RCR
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
102460882
NCBI-ProteinID:
XP_014424225
LinkDB
All DBs
Position
Unknown
AA seq
1196 aa
AA seq
DB search
MNLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINTATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADVGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGXXXXQXPFSASECSSQGGFKTKGPLHTRQSQRRVTFHLPDGSQE
SCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRG
LAEATEMCTQECLVLGHSDNCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKLVNGHTLTR
TWKEDSNRNQFSDRKQYGSGEGHFNTGNHMTDIPLANLKSYKQASGPAESPKEHQL
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcgggatttttacctgttggccgctctgattgcctgtttaaggctggattca
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaatgtacccata
ggaaacataccaaaggatctgaacatttctcacatcaatactgccacagggaccagtgcc
agccttgtctacagactggtttctaaagcaggggatgcccctttggtcaaagtgtccagc
accaccggggaaatcttcaccacctctaacagaatagacagagaaaaactctgtgcagga
gcctcatatgctgaagaaaatgaatgtttttttgaacttgaagtggtgatcctccccaat
gacttttttaggctaatcaaaataaaaataattgtaaaagataccaatgacaatgcacct
atgtttccatctcctgtcatcaatatttccatacctgaaaacactttgatcaacagccgc
tttccaattccatcagcaactgatcccgacactggtttcaatggtgtacagcactatgaa
ttgttaaatgggcagagtgtctttggactggatattgttgaaactccagaaggagagaaa
tggcctcaactgattgtacagcaaaacttggatagagagcagaaggacacctatgtgatg
aaaatcaaagtagaggatggaggaacccctcagaaatccagcacagccatactgcaggtc
acagtaagtgatgtcaatgataacaggccagtgtttaaagagagtcaggtggaggttcac
ataccagagaatgcccctgtaggcacctctgtaattcagcttcatgctacagatgcagat
gtaggaagcaatgcagaaatcagatatatttttggtgcccaagtagcccctgcaaccaaa
aggctttttgctttaaacaacacaacagggctgattacagtccagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggccagtgacggtagctctactcctgct
cgggcaactgtcaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcccatcaatggcacagtatacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtaatc
tgtttcattgagagagaggtcccatttcacttgaaggcagtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccaattttcagccagcctgtaattgagctgtcagtttctgaa
aacaatcgtcgtggtctatacttaacaactattagtgccacagatgaagatagtgggaaa
aatgccgacattgtttatcaacttggccctaatgcctcctttttcgatctggatcgaaag
acgggagttttgacagcctccagagtttttgacagggaagagcaagaacgtttcattttc
actgtaacagcaagggacaatggcacccctccgctgcagagtcaagcagctgtaattgtt
acggtgctggatgaaaatgacaacagtcccaaatttactcataatcattttcagtttttt
gtatctgagaacttaccaaagtatagcactgtgggagtgatcacagtgaccgatgcagat
gcaggggaaaataaagcagtcaccctttccatcctgaatgacaatgagaactttgtgctg
gatccttactctggagttataaagtccaatgtttcttttgatcgagaacagcagagctca
tacacgtttgatgtcaaggccattgatggaggacaacctcctcgctcttctacagcaaaa
gtaacaataaatgtaatggatgttaatgataacagccccgttgtcatctacccaccttct
aacacttcatttaagttggtgccactttcagcaatcccaggctctgtcgtagcagaagta
tttgctgtggatatagacactggaatgaatgctgaacttaaatacacaattgtaagtgga
aataacaaaggtttatttcgtattgatccagtgacaggtaatattaccctggaagaaaaa
ccagctcctactgatgtggggctgcatcgtttagtggtcaacataagtgacttaggttac
cctaaatccttgcatactcttgtgcttgtatttttgtatgtaaatgacactgctggaaat
gcctcttatatttatgacttgatacgtaggactatggaaacgcccttggaccggaacata
ggggacagtagccaaccttatcaaaatgaggactatcttactatcatgattgctatagtg
gcaggtgctatggttgtaatagtggtgatctttgtcacggttctggttcgctgccgacat
gcatctaggttcaaagcggcacaaaggagcaagcaaggtgctgaatggatgtctcccaat
caggaaaacaaacaaaacaaaaaaaagaaaaggaagaaaaggaagtctcctaaaagttct
cttttgaacttcgttaccattgaggaatcgaaacctgatgatgctgttcatgaacctatc
aacgggacaataagccttccagctgagctggaggagcaaagtataggaagatttgactgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgctaagcattacaaa
tctgcctctccacagtctgcttttcatcttaaacctgacactccagtatcagtgaaaaag
caccatgtgattcaggaacttccgttggacaacacctttgttggtggttgnnnnnnnnnn
cagnttcccttcagtgcctcagagtgcagttcccaaggaggcttcaagacaaagggcccc
ttacacaccagacagtcccagcgccgtgttacgtttcacctccctgatggctcccaggaa
agctgcagtgacagtggtctaggagaccatgagcctgtgggtagtggaaccctgatctca
caccctctccctctggttcagccacaggacgaattctacgaccaggcctcaccggacaag
aggactgaagctgatggcaattctgaccccaactctgatgggcctcttggtccacgagga
ttagctgaagctacagagatgtgtactcaagaatgcctggttttgggtcactcagataac
tgttggatgcctccaagtctgggtccataccagcagccaaagtctcctctctccaccttt
gcgcctcagaaagaatgggttaagaaggacaagctagtgaatggacacacattgacaaga
acctggaaagaagatagcaacagaaaccagttcagtgaccgaaagcagtatggttctggt
gagggccatttcaacactggcaatcacatgactgacattcctttggctaacttgaagtcc
tataaacaggcctcaggacctgctgagagtccaaaggagcaccagctataa
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integrated database retrieval system
