Pelodiscus sinensis (Chinese soft-shelled turtle): 102460953
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Entry
102460953 CDS
T02980
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X2
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102460953 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102460953 (CNOT6L)
Enzymes [BR:
pss01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
102460953 (CNOT6L)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102460953 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102460953 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
102460953
NCBI-ProteinID:
XP_006133927
Ensembl:
ENSPSIG00000016241
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRCLSMSLWSLTHLTALHLND
NNLARIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNMLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ
YFTLFLLALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGLKSLHAVDKQLLIVANAHMHWDP
EYSDVKLIQTMMFVSELKNILEKASIRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN
GIVADNHKDFKELRYNECLMNFSGSGKNGAPEGRITHGFQLKSAYENNVMPYTNYTFDFK
GVIDYIFYSNTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPPLPPL
VNGVHLPNRR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttacaccatcatgtcagca
gaggaggtagccaatgggaagaaatctcactgggcagaattagaaatctctggtagagtg
cggtgcttaagtatgtcactttggtccctgactcacttgactgctctacacctcaatgac
aataatcttgctcgcattccacctgatattgccaagctccataatctggtttacctggat
ctatcatccaacaaactccgaagtttaccagcagaactaggaaacatggtatctctcagg
gaattgcttttaaataacaatatgctacgggttttgccttatgaacttggacggctcttc
cagctacaaaccctaggtttgaaaggcaatcctttatcacaggatattctcagcctgtac
caggacccagatggaacacgaaagctgctgaactacatgcttgacaatctagcagttcat
ccagagcagctgcctccaaggccgtggattactttaaaagaacgagaccaaattctgccc
tcagcttcattcacggtcatgtgttacaatgtgttatgtgataaatacgccacccggcag
ctatatggctactgcccgtcctgggcattaaattgggagtatagaaaaaagggaatcatg
gaagaaatcgtgaactgggatgcagatatcattagtcttcaggaagtggaaacagagcaa
tacttcaccctctttctgctggcattaaaagaacgtgggtatgatggatttttttctcca
aagtcacgtgccaaaatcatgtccgagcaggagagaaagcatgtggatggctgtgcaata
ttcttcaaaacagaaaaatttacattggtgcagaagcacactgtggagtttaaccaggtg
gcaatggctaactcggaagggtcagaagctatgttaaacagagtgatgacaaaagacaac
attggagttgctgtggtattagaggtgcacaaagaattatttggagcaggtttgaagtcg
cttcatgctgtggacaaacagctgcttattgtggcaaatgcccacatgcattgggaccct
gaatactcagatgtgaaactcattcagactatgatgtttgtgtcagaactgaaaaatatc
cttgagaaagcctccatcaggcctggcagcccaacagcagatcctaattctatccctctg
gtgctgtgcgcagatcttaactcgctgcccgattcaggtgttgtggagtacttgagcaat
ggcatagtagctgacaaccacaaggacttcaaagagttgcgttataacgagtgtctcatg
aacttcagtggcagtggaaaaaatggagctcctgaaggaagaatcacgcatggcttccag
ctcaagagcgcctatgaaaacaacgtgatgccttacaccaattacacttttgatttcaaa
ggtgtgattgactacattttctattccaacactcatatgaacgtacttggcgttctgggg
cctttagatcctcagtggctggttgagaacaacatcactgggtgtccacaccctcacatc
ccttcagaccacttttcactgttaacacagcttgagctccaccctccgctcccgcctctt
gtcaacggcgtacacttacctaaccggaggtag
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