Pelodiscus sinensis (Chinese soft-shelled turtle): 102461039
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Entry
102461039 CDS
T02980
Symbol
COL28A1
Name
(RefSeq) collagen alpha-1(XXVIII) chain
KO
K23619
collagen type XXVIII alpha
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pss01002
]
102461039 (COL28A1)
Peptidases and inhibitors [BR:
pss01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
102461039 (COL28A1)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
Copine
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
102461039
NCBI-ProteinID:
XP_006114568
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MWKKHFAFCILLLAVATDHVVYGQNRKKGQKPILLAGKDDFQDPVCFIDIVFILDSSESA
KHVLFDKQKDFVENLSDKVFVMKPAKFRKYDVKLAVMQFSSTVKIDHPFVAWKDLNNFKQ
EVKNMNYIGHGTYSYYAISNATHLFKTEGRKGSVKVALLMTDGIDHPKSPDVQGISTTAR
DFGISFITIGLSSKKASKSNLHLLSGNPPNEPVLILNDPNLSEKIKEQLVTLFNKRCEQK
SCNCEKGDPGPPGPPGGHGGRGDKGDQGRKGDKGDSEKGESGEKGQVGAPGNKGEKGGRG
ECGTPGLKGDRGLEGPLGLKGPRGPQGISGPPGMPGPNGIQGNKGEPGPSGPYGPTGPPG
VGLPGPKGDRGQEGRIGPPGPIGIGEPGLTGPRGPEGVQGERGPPGEGFPGQKGEKGSEG
PAGPTGIAGESIKGDKGERGPEGPQGPIGPPGIGSQGSQGIQGPKGIPGQKGSQGIGVQG
PKGKEGESGHKGDPGPPGIGVPGPKGDPGTSGQPGQPGMKGQTGNNGKKGEKGAPGLRGL
EGPAGKGDVGQKGDQGEKGSPGVDGALGSQGPPGPKGEPGKKGSDGSPGPSIRGLPGPKG
EPGETGLKGSDGNPGDSIMGPMGNPGPTGLPGLPGPKGDGYPGAPGPPGLPGSPGPRGPK
GFGDPGQKGELGARGLPGPSGPRGIGILGPKGAVGQKGLPGPPGPQGDSIQGSKGERGVP
GLPGPRGSEGYGLPGPKGDYGEKGDPGKKGDKGDIGEPGPAGPKGLMGRKGELGLSKEEI
IRLIMEICGCGIKCKETPLELVFVIDSSESVGPENFKIVKDFVKALIDRVTVNQATARIG
IINFSHKVELVSTLQQYTSKDKLKLAVDNMQYLGEGTYTATAINKAIEIFQVARPGVRKV
AVVITDGQADTRDQSLDVVVRNAHAINIEIFVIGVVQKSDPNYEDFLKELDLIATDPDSE
HVYQIDDFITLPALENNLFKQICENDSSSILTRVFSSTSTPHPGFETRNERIDQSGKIST
PELYVHPPTQETVNFLSPQGIDRDTVLLTSTPDYIATTPIQGSIPGIHRQSGTSSLYGRP
EDVETRASPDEPRPFKKITPIEWPVPVLQPHVIATKKDPRCLEPMNSGDCRDYQMKWYYD
KDANSCARFWYGGCNGTRNRFEEERECQETCIYG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaaaacattttgccttttgtattttacttttggctgttgcaacagatcatgta
gtctatggacaaaacagaaagaagggacaaaagccaattcttcttgcaggaaaagatgat
tttcaggatcctgtgtgcttcattgacatagtctttatcttggacagttctgaaagtgca
aaacatgtgctgttcgataagcagaaagattttgttgagaatttaagcgacaaagttttc
gtaatgaaacctgctaaattccggaagtatgatgtcaaactggcagtcatgcagttcagc
agtacagtcaaaattgatcatccctttgtagcctggaaagacctgaataactttaagcag
gaagtcaagaacatgaactatattgggcatggcacttattcctattatgcaatttccaat
gccactcatctgtttaaaactgaaggtcgcaagggaagtgtaaaagtggctttgttgatg
accgatggtattgaccatccaaaaagtcctgatgtccaggggatatctacaacagctaga
gattttggaatatcattcattaccattgggctgtctagtaaaaaggccagtaaatcaaat
ctgcatttgttatctggaaatcctcccaatgaacctgttcttatcctaaatgatcctaat
ctctcagagaaaataaaagaacaattggttaccttatttaataagcggtgtgagcaaaaa
tcctgtaactgtgaaaagggagacccaggaccacctggccctcctggaggacatggtggt
agaggggataaaggtgatcaaggacgaaaaggagacaagggtgattctgaaaaaggagaa
agtggagaaaaaggtcaagtgggggctcctggcaacaagggagaaaagggtggaagagga
gaatgtgggacaccaggattaaaaggagacagaggattagaaggccctcttggactaaaa
ggaccccggggaccacagggaatcagtggaccaccaggcatgccaggtccaaatggtatt
caaggaaataagggagagccaggtcctagtggcccttatggtcccacaggacctcctggt
gttggacttccaggacctaagggtgacagaggccaggaaggaagaattgggcctccagga
cctattggaattggtgagccaggattaactgggcctcgtggtcctgagggtgtgcaaggt
gaaagagggcccccaggagaaggctttccaggccagaagggtgaaaaaggctcagagggc
ccagcaggtccgactggaatagcaggagagtcaatcaaaggtgataagggtgaaaggggc
cctgaaggaccacaagggcctataggaccacctggaattggcagtcaaggaagccagggt
atccaaggtcctaaaggtatacctgggcaaaaagggtctcaaggcattggtgtgcagggt
ccaaagggaaaagagggtgaatcgggacataagggtgatccaggaccaccaggaattgga
gtacctggaccgaaaggagatcccggaacatcaggacaaccaggacaaccaggaatgaaa
ggacaaactggaaataatgggaaaaagggcgaaaaaggagcacctggtttaagaggccta
gagggaccagctggaaaaggagatgttggccaaaagggtgatcaaggagaaaaaggatcc
ccaggagtagatggtgctttaggatcacaagggcctccaggaccaaaaggtgaacctgga
aaaaaaggctcagatggtagccctggaccatccattcgtggactgcctggaccaaagggg
gagccgggagaaactggactaaaaggaagtgatggaaatcccggagattcaataatggga
ccaatgggtaacccaggaccaacaggactacccgggctacctggaccaaagggagatggc
tatccaggtgcaccaggacctccaggactgccaggctccccaggaccaagaggccctaaa
ggcttcggagatcctggacaaaagggagagcttggagcaaggggattgccaggaccttct
gggcctaggggaataggaatacttggtccaaagggagctgtgggacagaagggtttgcca
gggccacctggccctcagggggacagcatacaaggaagcaagggagaacgaggagttcca
ggtttaccaggacctaggggttcagagggatatggtctccctggcccaaagggagattat
ggggagaaaggtgatccaggaaaaaaaggtgacaaaggagatattggagaacctggacct
gcaggaccaaaggggcttatgggaagaaaaggtgaacttggtctttctaaagaagaaatt
atcagacttatcatggaaatatgtggttgtggcatcaaatgcaaagaaactccactggaa
cttgtatttgtgattgacagctcagaaagtgttggaccagaaaacttcaaaattgtcaaa
gatttcgtgaaagcactcattgaccgggtaacagtcaaccaagctacagcccgcattggc
attatcaacttcagccacaaagtagaactggtatcgactctgcagcaatacacaagcaaa
gacaagctgaaactcgctgttgataatatgcagtacctaggggaaggcacttacacagct
acagctatcaacaaagccattgagatatttcaggttgcacgacctggggtaagaaaagtg
gctgttgtaataaccgatggacaagctgatactcgtgatcaatcattagatgttgtagtg
aggaatgcacatgccatcaacattgagatatttgtaattggggtggttcaaaagtctgat
cccaactatgaggattttctgaaagaactggacctcattgctacagaccctgacagtgaa
catgtttaccagatagatgacttcatcacactgcccgctctagaaaataatctcttcaaa
caaatttgtgagaatgactccagctccatactcaccagagtcttcagttcaacttcaact
cctcaccctggatttgaaacacgcaatgaacgtattgatcagtctggtaaaatttcaacc
ccagaactttatgtccatccacctacgcaagaaactgtcaattttctgagccctcaaggg
attgatagagacacagtgctgttgacttccacaccagattatattgccaccactcctatt
caagggagcattcctggtattcacagacaatcagggacttcttctctttatggcagacct
gaggatgtagaaactagagctagtccagatgaacctcggccattcaaaaaaatcacacct
atagaatggccagtaccagttctgcagcctcatgtaatagcaactaaaaaagatcctaga
tgcttggagcctatgaactcaggagactgtcgagattatcagatgaagtggtattatgat
aaggatgccaattcttgtgcccgattctggtatggtggttgtaatggcaccagaaatagg
ttcgaggaagaaagagaatgtcaggaaacctgtatttatggatga
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