Pelodiscus sinensis (Chinese soft-shelled turtle): 102461097
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Entry
102461097 CDS
T02980
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
102461097 (COL7A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
fn3
VWA
Kunitz_BPTI
Pur_ac_phosph_N
VWA_2
DUF4992
Motif
Other DBs
NCBI-GeneID:
102461097
NCBI-ProteinID:
XP_025044366
LinkDB
All DBs
Position
Unknown
AA seq
3236 aa
AA seq
DB search
MHMDQLLVALVGVEGGTPEPAGSGPSSKEARTQAPTMRRWILFLAVLLAPAPALAQKRNQ
GTCINVYAADIVFLVDGSSSIGRANFRMIRSFMEDLVRPFVHVVGERGVRFGAVQYSDDP
RLEFTLSQHPNGTEVRRAIQQLSYKTGNTRTGAGLRYIADNFFGPTQIRPGVPQVCILIT
DGKSQDDTEQPSVKLKAQGTKVFAVGIKNADRAELMSVASTPSDDYFFYVNDFKILSTLL
PLVSRRVCASTGGVLQTGSQVYSGPSNLVFVEQAADALRIRWTAAGGPVTGYKVQYVPLT
SLGQQVTAEMKEVSLSPGETSTVLRQLRGGTDYLVTVIAQYANSIGESVSGTGRTEALSG
VLNFRVVEAGPSFLRLAWAAALESLQGYRITYMAQGEAQAEEMSLGANSVSIMLSNLRPN
TDYVVTLQPVSQQQTVAPTRITGRTLRLERVQQLTVENISQQSMVVTWRGVSGATGYRVS
WGLPSGQDIRKFDVDASKNSYLLTGLQPGTDYLLTVMPLYGQIEGPPASIRRRTETGIVQ
SLRTVILGPTSIQVLWNIIRDARGYRLEWKRATGAEPPQTVTLPTNIDRYQLTGLQPATE
YRITLYTLYDGREVATPVTISQTGVEPQVGSISDLRVVGTVGKRLRLAWGGVPGATEYKI
VLRSSQDGSETTRQIPGTQTMLELDDLSEEVTYIVRVSALIGRREGSAVPLSIRIGPQPV
GSITNLRVAEIRPNQLRVTWSGLPGATSYKLTWRASDGQEISRVLPADRTSFSIEGLQAG
AAYVVGVSALVGDREGSPVTIPVRTAPEQVGMVSSLKVLSSRSNVVRVTWVGVPGATAYR
VVWSRRDGGSESSKLVSGDTSSFDILNLEGGVSYTVKVTALIGNREGDPVSIVVTTPAEV
APVQPVGNLQVIDSSEQRVRLTWSPAPGSSGYRLSWRPVAGGPERSQLLPPNVRSYDIEG
LEAGVRYEIRITSLVGSQESEPVGIAVSTAPLGRVTNFRVTETQDDSVTLAWTPAPGATG
YLLTWKLPQEGGEMQRMLPGSATSHQVSGLRLGHRYVFTIQPLFGSTRGMESSVTDRTVC
RDARGDVIFLVHGTRDSAYSAEAVRALLTNTVSALGRLGPDATQSGHNSSERRPPPGRPR
DVDRMGRGGEGGGPVPTMRYEEPSGSALGAAPSFARIYMLSPSAGRRPGVPGVLVVLADS
PSSDDAIGPAREVKAAGLLVLAVGMDGADREQLRRIVTSEDPRHVFYAKDSSAGLSELED
GLAGALCRVIATDREEPCAVQCPKGEKGEPGPTGPQGRAGQPGPPGQPGLNGLPGPPGPV
GPRGAPGEIIERPGAKGDRGFPGIDGTSGSPGRPGNPGSPGQPGSQGIPGLRGVPGEQGP
VGPPGLRGQKGEPGEPGVIVNGGGRLPGRKGEPGSPGNSGPPGNPGPRGAIGDPGPPGPI
GPPGPSGPAGEFVKGAKGERGERGLPGLIDGEPLRGEPGAPGLPGNPGDPGPRGPAGPPG
QKGDKGDGEEGFPGPPGRPGDPGDRGPRGPVGEPGSKGDRGQPGELGEAGEKGDRGPPGP
EGQKGELGAPGRLGPTGREGLPGPAGPRGEKGDQGAPGEPGKSASSVSGVKGEKGDRGPA
GAEGAPGPRGEAGNKGDRGAPGLSVPGPPGPKGEQGERGIVGLAGKSGPKGDPGEPGEKG
ELGRPGAPGQMGLRGKEGERGEKGDEGAPGESGQPGKPGDRGPRGLPGNRGLPGEKGDQG
DPGEDGRNGSPGVPGAKGDRGEPGPAGPPGRIVDSGAGGGIGEKGEKGDPGDPGEDGMKG
AKGEAGLPGERGIEGPRGPPGARGDPGDRGPSGEKGDRGPPGLDGRNGLDGKPGQMGPTG
QRGDQGKQGDPGRDGLPGLRGEQGPPGAVGPPGPPGLTGKPGDDGKPGPNGKNGEDGIPG
EDGRKGDKGEAGAPGRDGQEGPKGERGDRGAPGPLGPPGVPGQVGIPGQGAPGLTGAAGQ
KGDRGEPGSKGDQVSTQHDLGKPRRQTEKYRAAEGPRGPPGARGDPGDRGPSGEKGDRGP
PGLDGRNGLDGKPGQMGPTGQRGDQGKQGDPGRDGLPGLRGEQGPPGAVGPPGPPGLTGK
PGDDGKPGPNGKNGEDGIPGEDGRKGDKGEAGAPGRDGQEGPKGERGDRGAPGPLGPPGV
PGQVGIPGQGAPGLTGAAGQKGDRGEPGSKGDQGRPGDPGLRGEPGTVSNVERALESYGI
KISSLREITGAFDGSTDPFLPYPDRWRGPKGDSGDPGERGSPGKEGAMGFPGEKGPKGDK
GDQGPAGPQGPTGRAIGERGPEGPPGQAGEPGKPGIPGVPGRAGELGEAGRPGEKGDRGE
KGDRGEPGRDGVQGPPGPPGPKADVVEGSLSGFPGERGPPGSKGAKGESGVDGERGPKGD
KGEAGQKGERGEAGEKGRDGSPGLPGERGLAGPEGKPGMPGFPGVLGRPGNQGDPGPPGP
AGLAGPPGAQGPSGIKGDPGEPGSSIRGLPGPQGNVGLPGPSGPPGLVGPQGAPGLPGQV
GETGKPGVPGRDGVPGTQGEPGLPGKIGVPGPVGPAGSKGEPGDAGLRGQAIVGPPGMKG
EKGAPGDIDGNLLGEPGAKGERGLPGPRGEKGESGRQGEPGDPGEDGAKGAPGVKGEKGS
VGIGLQGPPGQDGPQGLKGDTGLPGPPGSPGLPGTAGTPGQPGLRAENGQPGPPGPPGER
GLIGFPGRDGTSGSPGPLGPPGPAGAPGTPGLKGDKGDVGVGQPGPRGERGDPGQRGEDG
RPGLEGDRGPAGPPGNRGERGDKGDVGALGLKGDKGDTVIVEGPAGVRGSKGEPGDRGLK
GTEGEKGDKGDPGFPGEKGGKGEQGEKGSAGFPGARGPGGQKGEVGESGDSGAPGLPGKD
GIPGLRGEKGDMGPLGVRGPKGERGTKGACGQDGDKGEKGEPGIPGRMGLPGRKGELGEL
GMPGTPGIPGKEGLMGPKGDRGFNGQQGAKGDQGEKGDRGAPGVIGSPGARGNDGAPGPP
GPPGSVGPKGPEGIQGQKGERGPSGESTVGARGVPGMPGERGDQGSPGLEGPRGEKGEPS
LTEQEIRSFVRQEMSQHCACGGQFSSEPRLLPNYPSTQPLPSANAQLVPVLKLSHAEEED
GREVHVVHTNDPEYEHVYAMEDYEESLEADGTESTMLRDADPCSSPLDEGDCNRFTLRWY
YNQKVAECRPFIYSGCRGNLNRFYTKEDCDLQCRHQADADAQIAADNTSAEKRLNA
NT seq
9711 nt
NT seq
+upstream
nt +downstream
nt
atgcacatggaccagctgcttgttgctcttgtaggagtggaagggggaactcctgagcct
gcaggatctgggccttcaagcaaggaagcgaggacacaggctcccacgatgcgacggtgg
atcctgtttctcgctgtgctgctagctccggcaccagccctggcccaaaagagaaaccaa
gggacgtgcatcaatgtttatgcagccgacattgtgttcctggtggatggatcctccagc
attgggagggccaacttccggatgatccgatccttcatggaggacctggtcaggcccttt
gtccatgtggtcggtgagagaggtgtgcggttcggagcagtgcagtacagcgatgacccc
aggctcgagttcaccctctcccagcatccaaacgggaccgaggtgaggagagccatccag
cagctcagctacaagaccgggaacacacgcaccggtgccggcctgcgctacatcgctgac
aacttctttgggcccactcagatccggcccggggtcccacaggtctgcatcctcatcaca
gacggcaagtctcaagatgacactgagcagccgtccgtgaagctgaaggctcagggcacc
aaggtctttgctgtggggattaagaacgcagaccgtgccgagctcatgagtgtggcttcc
acgccctcggatgactacttcttctatgtcaacgacttcaagatcctgagcaccctgctg
ccactggtgtctcggagggtgtgcgccagcaccggaggggtcctgcagacaggttcgcag
gtgtatagcggcccatccaacctggtcttcgtggaacaggcggcggatgcactgaggatc
cgctggacagcagcgggtggccccgtcacaggctacaaagtccagtatgtgccgctcaca
agcttggggcagcaagtgacagcagagatgaaagaggtcagcctgagccctggggagacg
agcaccgtgctgcgccagctgcggggagggacagattacctggtcaccgtcatcgcccag
tacgccaacagcatcggcgagtcggtctctggcacaggacgcaccgaggccctgtccgga
gtgttgaatttccgagtggtggaagcggggccgtctttcctcaggctggcctgggcagct
gccttggagagcctgcagggctaccggatcacctacatggctcaaggtgaggctcaggca
gaggagatgagcctgggggccaactctgtgtccatcatgctcagcaacctgcgccccaac
actgactacgtggttactcttcagcctgtctcccagcagcagacagtagcaccgacccgg
ataactggccgaaccctgcgtttggaaagggtgcagcagctgacagttgagaacatttcc
cagcagagcatggtggtgacctggcggggtgtgagtggagctactggataccgggtctcg
tgggggctcccctcaggccaggacattcggaaatttgatgtggatgccagcaagaattcc
tacctgctgactggactgcagccaggcacagattacctgctgacggtcatgccactctac
gggcaaatagaggggcccccagcctccattaggagaagaacagaaacgggcatagtccag
tccctgaggacagtcattctgggcccaacatccatccaagtgctctggaacatcatccgc
gatgcccggggctaccggctggagtggaaaagagcaacaggtgctgagcccccgcagacc
gtgaccctgcccaccaacatcgacaggtaccagctgaccggcctgcagccggccacggaa
tatcgcatcaccctctacacactgtatgatgggagagaggtggccacgcccgtaaccatc
tcccagacaggtgtggagccccaagtgggcagcatttctgacctgcgggtcgttggtact
gtggggaagaggctccggctggcctgggggggggtcccgggtgccactgagtacaagatc
gtgctgcgcagctcccaggatggcagcgagacgaccaggcagatcccaggcacccagacc
atgctggagcttgacgacctgagcgaggaggtcacctacatcgtgcgcgtgtcagccctg
attggcaggcgtgagggcagcgccgtccccctcagcatccgcattggtccccagcctgtg
ggcagcatcaccaacctgcgggtggctgagatcagacccaaccagctgagagtcacatgg
agtgggcttcctggggcgactagctacaagctgacatggcgggcgagtgatggccaggag
atctcccgggtcctgccagccgacaggacctccttcagcatcgaggggctgcaggccggg
gctgcctatgtcgttggggtctcggccctggtgggcgacagggaaggcagccctgtcacc
atcccggtgagaacagctcctgagcaggtggggatggtctccagcctcaaggtcctctcg
tccaggagcaacgttgtccgggtcacctgggttggagtgcctggggcgactgcctacagg
gtggtgtggagccggcgagatgggggctccgaatcgagcaagctggtctctggcgacacc
agctcctttgacattctcaacctggaggggggggtcagctacaccgtgaaggtcacagca
ctgattggcaaccgtgagggtgaccctgtctccattgtcgtcaccacacctgcagaggtg
gccccagtccagcctgtggggaacctgcaggtgatcgactcctcggagcagcgcgttcgc
ctcacctggagccccgcgcctggcagcagtgggtaccgcctgagctggaggccagtagcc
ggagggccggagaggagccagctgctcccccccaatgtccgctcctacgacatcgagggc
ctggaggcgggagtgcgctacgagatccggatcaccagcctggtgggcagccaggagagc
gagcctgtgggcatcgctgtcagcactgcacctctgggccgagtcaccaatttccgggtg
acggagacccaggacgattcggtgaccctggcctggactccggctcctggagccaccggc
tacctcctcacctggaagctgccccaagagggaggtgagatgcagaggatgctgccaggg
tcagcgacatcccatcaggtgtcggggctgcggctggggcacagatacgtcttcaccatc
cagccgctgttcgggagcacgaggggcatggagtcgtctgtcactgaccgcacagtttgc
agagatgctcgtggtgacgtcattttcctggtgcatggcacccgggacagtgcctacagc
gctgaggccgtccgcgccctgctcaccaacactgtttccgcgctgggccgcctgggccct
gacgccacacagagcggtcacaactccagtgaaaggcggcctcccccaggcaggccaagg
gatgtggacagaatggggagggggggggaaggaggtggccctgtgcccaccatgcgctac
gaggagcccagcggcagtgccctgggagctgcccccagctttgccaggatctacatgctg
agccccagtgcagggcgccggcctggtgtgccaggggtgctggtggtgctggcagacagc
ccctccagtgacgatgccattggtccagccagggaggtcaaggcagcagggctcctggtg
ctggccgtgggcatggacggggcggatcgcgaacagctgcgccgcatcgtcaccagcgaa
gacccgcgccatgttttctatgccaaggactcgagtgccggcctgtcggagctggaggac
gggcttgctggcgccctctgcagggtgattgccacggacagggaggaaccctgcgcagtg
cagtgtcccaagggtgagaagggggagcctggtccgactgggccgcaaggacgtgcagga
cagcccgggccccctggacagccggggctcaatgggcttccgggccccccagggccagtg
ggaccacggggtgccccaggcgagatcatcgagcggccaggcgcgaagggggacagggga
tttcccggaatagatgggacctcaggaagtcctggtcgccctggcaaccctggctcccct
ggccagccaggcagccaaggcattcccggtctccgaggagtcccgggggagcagggccca
gtggggcctccggggctgcggggacagaaaggcgagccgggagagccgggggtgattgtg
aatggaggagggaggctgcctggccggaaaggggagcctggcagtccgggaaattctggg
ccccctgggaatcctgggcctagaggagcaatcggggatccaggaccccctgggcctatt
ggacctccaggaccatcaggacctgccggagagtttgtcaagggggcgaaaggcgagcga
ggggagcggggcctgccagggctgattgatggggaacctctcagaggagagccaggtgcc
ccgggcttgcctggcaaccctggtgatccgggcccccggggacctgctgggccaccagga
cagaaaggagacaagggcgatggggaagaaggttttccagggccaccgggtcggccaggg
gacccaggagatcggggcccgagaggacctgtaggtgaaccaggaagcaagggtgaccga
ggacagccgggagagctgggagaagcaggggagaagggcgatcgcggaccccctgggccg
gaagggcagaagggggagctgggagccccaggccgcctgggcccaacaggcagagaggga
ttgccaggaccggccggcccacgaggggagaagggggatcaaggtgctcctggggaacct
ggaaagtcggcttccagtgtctctggagtcaaaggagagaagggtgacagaggcccagca
ggagcagagggggcccccggtcccaggggagaggcgggaaataaaggagaccgcggtgcc
cctggattgagtgtccctggcccccccggccccaaaggagagcagggcgagagggggatt
gttggcctcgcgggcaagagtggccccaagggtgacccaggggagcctggtgagaagggg
gagctggggagacccggagctccagggcagatgggcctgcgagggaaggagggtgaacgt
ggtgagaaaggggacgagggagccccgggagagtcggggcagcctggcaaacctggagac
aggggcccccggggcctaccaggaaaccgtggcctccccggggagaagggtgaccaggga
gacccaggcgaagatggcagaaatggcagccctggagtgccaggggctaagggtgaccgt
ggggaaccggggccggctggacccccaggacgaattgttgattcgggagctggaggagga
ataggagagaaaggcgagaagggggatccgggggatcccggagaggacgggatgaagggc
gcaaagggcgaggctgggttacctggagagagggggatcgaaggccccagaggcccccct
ggagctcggggtgaccctggggaccgaggcccatcgggagagaagggggaccgaggccct
ccggggctggatggccggaacgggttggacggcaaacctgggcaaatgggccccacaggg
caaagaggtgaccaaggcaagcagggtgaccctggacgagatggactgccaggcttacga
ggggagcaaggccccccaggagctgtcggcccccccggaccaccaggcttgactggaaaa
cctggagatgatggcaaacccggcccgaatgggaagaatggagaagatgggatcccagga
gaagatgggaggaagggggacaaaggagaagctggagcccctggcagagacggtcaagag
ggccccaagggcgagcgaggggatcgtggtgcgccaggccccttgggacctcctggtgtc
cctgggcaggttggaatcccaggtcagggtgctccaggcctcaccggggctgctggacaa
aagggtgaccgaggagagccgggatccaaaggagaccaggtgagtacccagcacgacttg
ggcaaaccaaggagacaaacagagaaatacagggctgccgaaggccccagaggcccccct
ggagctcggggtgaccctggggaccgaggcccatcgggagagaagggggaccgaggccct
ccggggctggatggccggaacgggttggacggcaaacctgggcaaatgggccccacaggg
caaagaggtgaccaaggcaagcagggtgaccctggacgagatggactgccaggcttacga
ggggagcaaggccccccaggagctgtcggcccccccggaccaccaggcttgactggaaaa
cctggagatgatggcaaacccggcccgaatgggaagaatggagaagatgggatcccagga
gaagatgggaggaagggggacaaaggagaagctggagcccctggcagagacggtcaagag
ggccccaagggcgagcgaggggatcgtggtgcgccaggccccttgggacctcctggtgtc
cctgggcaggttggaatcccaggtcagggtgctccaggcctcaccggggctgctggacaa
aagggtgaccgaggagagccgggatccaaaggagaccagggcagaccaggggatcctgga
ctgcgtggtgagcccgggacagtctcgaatgttgaacgtgccctggaatcctatgggatc
aagatttcctctctcagggagatcactggagcctttgacgggagcactgatccattcctg
ccctaccctgaccgctggagaggccccaagggcgatagcggggacccaggggagagggga
tctccaggcaaagagggtgcgatgggctttcctggagagaaagggcccaagggcgacaaa
ggagaccaaggccctgcgggcccccaaggccccacgggacgagctattggagagcgaggt
ccagaggggccgcctggccaggcaggggaacctggcaagcctggaatccctggtgtgcca
ggccgggcaggggagctcggagaggctggccgacctggtgagaagggtgatcggggcgag
aagggcgatcggggagagccgggcagagatggtgtgcagggtcctccagggcccccgggg
cccaaggcagatgttgtggaaggaagcctctcgggttttccgggggagcgtggaccccca
ggatccaagggagccaagggagagtcaggtgtggatggcgagagaggacccaaaggagat
aagggtgaggctgggcagaagggggagagaggagaagctggtgagaaaggcagagatggc
agcccgggcctcccaggtgaaagaggccttgctgggccagaaggcaaaccgggtatgcca
ggctttcccggagttctaggccgaccgggcaaccagggagatccagggcccccaggccca
gctgggcttgctggaccaccaggcgctcagggcccatcgggaataaagggagacccaggt
gagcctggctccagcattcggggcttgcccggacctcaggggaatgtcggcctccctgga
ccttcaggtcctcccggcctcgtgggaccacagggcgccccgggattgccaggacaagtg
ggcgagacggggaagcctggtgtgccggggagagatggagtgccagggacgcagggagaa
cctgggctgcctggaaaaattggtgtgccaggacctgtgggccctgctggatccaaagga
gagccaggggacgctgggctccgaggacaggcgattgttggtcctcctggaatgaaaggc
gagaagggtgcccctggcgatattgatgggaacctgctgggtgagccgggtgccaagggc
gagcgaggcttaccgggccccaggggagagaagggggagtctggaagacagggggagcct
ggagaccctggggaagatggagccaaaggagcccctggagtcaaaggggaaaagggttcg
gttgggattggcctgcagggaccccctggacaagatgggcctcaaggtttgaagggcgac
actggcttacctggcccaccaggatcccctggcttgccaggcaccgcagggacccctggc
cagccaggtctgagggcagaaaacggacagccaggcccaccaggacctccaggagagcgg
ggtttgattggcttccctggaagagatggcacctccggatcaccaggaccactgggcccc
ccagggccagctggggcaccaggcactccaggactgaagggtgacaagggagatgtgggg
gttggacagccgggccccagaggcgagcgaggggatccagggcaacggggtgaagacggg
cgcccagggctggagggagatcgtgggcctgcggggcctcccgggaaccgtggggagcga
ggtgacaaaggagatgttggagctctggggctcaaaggagacaagggtgataccgtcatt
gtggagggaccagctggagtccgggggagcaagggggagccgggagaccgtggcctgaag
ggaacggaaggggagaaaggcgacaagggggacccaggctttccaggagagaagggaggg
aagggcgagcaaggagagaagggctccgcaggcttccccggagcacgcggtccagggggg
cagaagggtgaggttggcgaatcaggagactctggagcgccgggcctgccagggaaggat
ggaatcccaggactgagaggggagaaaggggacatggggccactgggagtccgagggcct
aagggggagcggggaacgaaaggcgcctgtggccaggacggagacaagggggagaagggg
gagccggggattccaggccgaatgggacttccaggaaggaagggtgagctgggagagctg
ggcatgccgggaaccccaggaatccctgggaaagaaggtctcatgggacccaagggtgac
aggggatttaatggccaacagggagccaaaggagaccagggagagaaaggagaccggggt
gctccaggcgttattggctccccaggtgctcggggcaatgatggagcacctggcccaccc
ggcccaccaggtagtgttggccctaagggccctgaggggattcaagggcagaagggtgaa
agaggtccctcaggggagtcaactgtaggggcccgaggtgtccctgggatgccaggagag
agaggagatcaggggagtccgggactcgaaggcccgagaggagagaagggggagcctagc
ctgacggaacaagagatacgctcgtttgtcaggcaggaaatgagtcagcactgcgcttgc
ggagggcagttctcttccgaaccacgtcttctccccaactatccatccacccaaccattg
ccgtctgctaatgctcaactagtccctgtgctaaagttgtcacatgctgaagaagaggat
ggccgtgaggtgcatgttgtgcacacaaatgaccctgagtatgagcacgtctacgccatg
gaggactacgaagagagcctggaagctgatgggacagagagcactatgctgagagatgct
gacccttgcagttcgcccctggatgagggagactgcaacagattcacactcaggtggtat
tataaccaaaaagtggcagagtgccggcctttcatctacagcggctgcagggggaacctc
aatcgtttctacaccaaggaggactgtgatcttcaatgcaggcaccaggcagatgcagat
gcccaaattgctgctgacaacacatcagctgaaaagagattgaatgcgtaa
DBGET
integrated database retrieval system
