Pelodiscus sinensis (Chinese soft-shelled turtle): 102461156
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Entry
102461156 CDS
T02980
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102461156 (NRDE2)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102461156 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
Motif
Other DBs
NCBI-GeneID:
102461156
NCBI-ProteinID:
XP_006122408
Ensembl:
ENSPSIG00000005588
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MALFPAFAGAAEPGETPASGSEGSRRELNWLSNPSFCTEDALKLHQHTTKTVDLTAERSE
LTSRSPSRAELSGGSDTDEGLKKSIKKSKWKKKKHHHHKKRKKKTRDESSNSESDLDTEC
VKGKPRGSNTNPEREVAALNLEDITSNVATNRFVWLEDIQALTAETFRTDKKPDPANWEY
KSLYRGDIARYKRKGDFCLGIDLKKQRITWEGPMVEKKQSHKRPERYFTKNSVQLLRAGG
IPVYSKSQTYSSDPSTFILVSQVDSDAPPATTRVNPLGIYDPLTTLWLQGKGPPEYETSK
QQASQETSENVNSFLMAKVEDYNKRVRENPRDVHTWMEFVSFQDELMRGPSLYAFKEGEQ
EIRRKSFKLILEKKLSILERAIESNPNEVDLKLAKLNLCTEFWEPSTLIKEWQKLVFLHP
NNPVLWQKYLLFCQSQFSTFSVSKVNSLYGKCLSTLAAIEDGSMVSHPVLPGTEEAMLAI
FLQQCHFLRQTGHSEKAVSLFQALVDFTFFKPDNVKDLPTRGQVEFFEPFWDSGEPRFGE
KGAKGWKSWMHQQEKGGWIVINKPDEDEEDVDEDPEIKDKTLPKWQIWLDVECSRETRHW
MPWRPDKTKKQSEEDCEDPERQVLFDDLGPSLIRLSSPDLQFQLLYSFLQFLGVPCERNL
FPSNLYIAMDENSIFDAGHSEGPLTSFDSLLSGVNSIGHMDTMIRERQRIGHCKEGEEFL
QNVFHFILPMFSGKEKSNLSVCWLQYEISKVVQCLQVKNKKKLKSQGKKSKKLAKNLLKE
SENRNSLSLWKLYAYLEWLLGNTEDSRKVFDTALCLAGTDGMRSTQLCNLSLFYASLEVE
LLESLEETVMSRAVHILTKVTESGPYVPYTGQVLSVNILKARKAYEHALKDYLNESPVTN
WDQASGSSQMVSLVGCYALFQYLTVGIDAAVFIYRNISEKLKDFASQKFESIGENLGVQN
FPTALEAVTLMHTNLLRYHMKVSIYPLNPLREALMEALKLYPSNQSLWRSYIQIQSKSHN
ASKARRFFDSVARSTKFLEPWLFAIQAEMMRKKLVESVQRVDVGEIYSTIPETGLTNRIK
ALFEHAIQSENGAHCPLLWRMYLNFLFSLGNKERSKGLFYKALQNCPWAKVLYMDAIEYF
PDQLQEILDLMTEKELRIRVPIEELELLLED
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggctcttttcccagcctttgccggcgccgccgagcccggggagacgcccgctagcggt
agcgagggctccaggagagaattgaactggcttagcaatccgagcttctgcacagaagat
gcactaaaactgcaccagcatactacaaagactgtagatcttactgctgagagatcagaa
cttacaagcaggagtccttcaagagcagagctttcaggaggaagtgataccgatgaaggt
ctaaaaaaatcaattaagaaaagtaaatggaaaaagaaaaagcatcaccaccacaagaaa
agaaaaaagaaaactagagatgaatcaagtaacagtgagtcagacttggatactgagtgt
gtgaagggtaaacctcgaggaagtaacacaaaccctgaaagagaagtagcagcattaaat
ctagaagatataacatcaaatgttgccaccaatcgctttgtttggcttgaggatattcag
gctttgacagcagaaaccttcagaacagacaagaaaccagaccctgcaaactgggaatac
aagtcactatatcgtggcgacatagcaagatacaagaggaagggtgacttctgccttggt
attgacctaaagaaacaacgtataacttgggaaggtcccatggtagaaaagaaacagtcc
cacaagcgacctgaacgctacttcacaaaaaacagtgtgcagttactgcgtgcaggtgga
attccagtttacagtaaaagccaaacttattcatctgacccaagcacctttatattagtt
tcacaagtggacagcgatgctcctcctgcaacaaccagggtgaatcctctggggatttat
gatccattgactactctgtggttgcaaggaaaaggtcccccagagtatgagacttcaaag
caacaggcatcccaagaaaccagtgaaaatgttaactcttttctaatggcaaaagtggaa
gactataataagagggtcagagaaaacccaagagatgtccacacttggatggaatttgtt
tcttttcaggatgaactaatgagaggacccagcctttatgccttcaaggagggagagcag
gaaataaggagaaaatcattcaagctaatactagaaaagaaactgtcaattttagagaga
gctattgaaagcaacccaaatgaggttgatctgaagcttgccaagctgaacctttgtaca
gaattctgggaaccatcaactttgatcaaagaatggcagaaactggtttttttgcatccc
aataatccagttttatggcagaaatatctcttattttgtcaaagtcagttcagtaccttt
tcagtttcaaaagtcaatagtttatatggaaaatgtttgagcactttggcagctatagag
gacggcagtatggtatcacatcctgtactacctggcacagaagaagctatgttagctatc
tttcttcagcagtgccattttcttagacagacgggccattctgagaaagctgtgtctttg
ttccaagccctggttgatttcaccttctttaaacctgacaatgtaaaagatctgccaaca
agaggacaggtggagttctttgaaccattttgggacagtggagagcctcggtttggagaa
aaaggagcaaaaggctggaaatcatggatgcatcaacaagaaaagggaggctggattgtt
atcaataaacctgatgaagatgaggaagatgtagatgaagatccagaaataaaggataaa
actctacccaaatggcaaatttggcttgacgttgaatgttcccgtgaaacaaggcattgg
atgccttggcgacctgacaaaactaaaaaacagagtgaagaagattgtgaagacccagag
agacaggtattatttgatgatcttgggccatctttaatcagactttctagtccagatctt
cagtttcagctgctatattcatttctacaatttttgggagtcccatgtgagcgtaatctc
tttccttcaaatctctatatcgctatggatgagaatagcatctttgatgctgggcattct
gaagggccactgacttcttttgactcactgctttctggagtcaatagtattggccatatg
gatacaatgatcagagagagacagcgcataggacactgtaaggaaggagaggagttccta
cagaatgtctttcatttcatactgccaatgttttcaggaaaggaaaagtcaaacctgtct
gtctgttggctacaatatgaaatctcaaaggttgttcagtgtctccaagtgaaaaacaag
aagaaactgaagtcacaggggaagaagagcaaaaaactagccaagaatctccttaaggaa
tctgaaaaccgaaacagcctttccctctggaaactgtatgcttacttggagtggttactt
ggcaacacagaagattctagaaaagtgtttgatacagctctttgtttggcgggaactgac
gggatgagaagtacccaactctgtaatctgagcttgttttatgcttcactggaagtggag
ctgttagagagtctggaggaaactgttatgtcacgtgctgtacatatattgaccaaagtg
actgaaagtggaccatatgtgccttatactgggcaggtgttatctgtgaatatcttgaaa
gctcggaaagcatatgagcatgcattgaaagattatttaaatgaaagccctgtcactaac
tgggatcaggccagtggttctagccaaatggttagtttagttggttgttatgcgcttttc
cagtatttgactgttgggattgatgctgctgtattcatatatagaaatatttctgaaaag
cttaaagattttgcttcacagaagtttgaaagtattggagaaaatcttggcgttcagaat
tttcccactgcccttgaagctgtcacactcatgcacacaaatttactcaggtaccatatg
aaagttagcatttatcctttaaatccactgcgagaggcactaatggaagctttgaagctg
tatcctagcaaccagtctctttggagatcatatatccagatccaaagcaagtctcacaac
gctagcaaagcacgaagattttttgatagcgtcgcaaggtctaccaagttcctagagcca
tggctgtttgcaatccaagccgagatgatgagaaagaagcttgttgagagtgtccaaaga
gtagatgttggagaaatatattcaacaattcctgaaaccggattaacgaatcggatcaaa
gctttatttgaacatgcaattcagagtgaaaatggtgcccattgtccgttgctgtggaga
atgtatttgaattttctgttttctctcggaaataaagaaaggagcaaaggactattttac
aaagctcttcagaactgtccctgggcaaaggtgctgtatatggatgcaatagaatatttt
ccagatcagctgcaagagatcctagatctaatgactgaaaaagaattgagaataagagta
cctatagaagaactggaactgctactggaagattaa
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