Pelodiscus sinensis (Chinese soft-shelled turtle): 102461489
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Entry
102461489 CDS
T02980
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102461489 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102461489 (SMG7)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
102461489 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
102461489 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
102461489
NCBI-ProteinID:
XP_014430911
Ensembl:
ENSPSIG00000012201
LinkDB
All DBs
Position
Unknown
AA seq
1161 aa
AA seq
DB search
MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKN
RANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQMHTSA
IVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS
KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWGVSDFIKAFIKFHG
HVYLSKGLEKLSPLRERLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQH
SYSQDEQLCWTQLLALFISFLGVLCKCPLQNDFQEESWGTYPLPAVKVSMDWLKLRPSVF
QEPVVDERQYIWPWLISLLNSFQPHEEDLSSTNVTPLPEEFELQGFLALRPSFRNLDFSK
GHQGITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPS
EAKESLILQETSIAEPLSTDGSPGLKSVLSTGKNLSNCDTGEKPMVTFKENIKPREVNRE
QGRIYPPXXXXTPATKNDGKKDNNKRKNEIKKCGLEKMQEAGKQNVAVQVKSQTEMRKTP
VSEARKTPVTQTPTQANNSQFIPIHHPGAFPPLPSRPGFPPPAYVIPPPVAFSMSSGYTF
PGGVSVPGTFLQPTAHSSAGNQVQGGKQSHIPYSQQRPSGPGPMNQGPQTAPPSQQPLSS
LQAQATAQSASQLQVQALAQQQQSPTKAVQGLGKSPPHHSGFQQYPQADSSKQLWNPPQV
QGPLGKMMPVKQPYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKM
PEFYWDSSYGMADRVVMAQQANMDRRGKRPQGVFRPEQDTVPRMAFEDSKSSPLLPPDLL
KSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSQSSSFLSLTGF
SLNQERYPNSSMFNEVYGKNLNTSTKAEVTPSMAHQETSLYSLFEGTPWSPSLPASSDHS
TPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRIADRWKTDKPAMGGFG
LDYLPATSSSSESSWHQTSTPSGTWAAHGPLMEDSSAVLMESLKSIWSSSMMHPGPSALE
QLLMQQKQKQQRGQGPMNPPH
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcaaagctgggtccagctgaagtctggacatccagacaagctctgcaggac
ttataccagaaaatgctagtaactgatctggagtatgctttagacaagaaagtggaacag
gacctctggaatcatgcttttaagaatcagatcacgacacttcaggggcaggcaaaaaac
cgagcaaacccgaatcgaagtgaagttcaggcaaacctttctctattcctagaggcagct
agtggtttctacacacagttattacaggagctgtgcacagtgtttaatgtagacttgccc
tgccgtgtgaagtcctcccagctgggaattatcagcaataaacagatgcacaccagcgct
attgtgaagccacagtctagctcctgctcatacatctgccagcactgccttgtccacctt
ggagacattgctcgctacaggaatcagaccagccaggcagagtcctactacagacatgca
gctcagcttgttccctccaatggtcagccttacaatcagttggctattttagcttcctct
aaaggagaccacctgaccacaattttctactactgcagaagcattgctgtgaagttccct
ttcccagctgcctccactaatctacaaaaagcactttctaaagcactggaaagtcgggat
gaggtgaagactcgatggggggtgtctgacttcatcaaggcgtttattaagttccatggc
catgtgtatctgagtaagggcttggaaaaactgagccctcttcgggagaggctggaggaa
cagttcaagaggttgttattccaaaaagccttcaactctcagcagttagttcatattact
gtgatcaacctgtttcaactgcatcatctgcgagattttagcaatgaaactgaacagcat
agttacagccaagatgagcagctctgctggacacagctacttgccctcttcatttccttt
cttggagtcctgtgcaagtgtccactgcagaatgacttccaagaggagtcttggggtaca
tacccgcttcctgctgtaaaggtctcgatggactggctgaaacttagacccagtgtcttc
caggagcctgtagttgatgaaagacagtacatttggccatggctgatttctctgctaaac
agcttccagccccatgaggaagatctttccagcactaatgttaccccacttccagaggag
tttgaattgcagggattcttggctctgagaccttcattcaggaacttggatttctccaaa
ggccaccaggggattacaggagacaaagaagggcagcagcgacggatacgacagcagcga
ctgatcttcactggaaaatggattgctgacaaccagccaaggctgattcagtgtgaaaat
gaagtaggaaaactgttgtttttgacagaaatcccagagttgttactagaggaccctagt
gaagccaaagagagtctcattctacaggaaacatctattgcagagccactgtctacagat
gggagcccaggactcaaatcagttctgtccactggcaaaaatcttagcaattgtgacact
ggggagaaaccaatggtcacattcaaagagaacattaaaccacgagaggtgaaccgagag
caagggagaatctatccacctnnnnnnnnnngaaccccagccactaaaaatgatggaaag
aaagacaacaacaagagaaagaatgaaatcaagaaatgcggcttggagaagatgcaggag
gcaggaaaacagaatgtggcagtgcaggtgaaatctcagactgagatgagaaaaactccg
gtgtctgaagccaggaaaacacctgtaactcagaccccaacccaggcaaacaattcccag
ttcatccccattcatcacccaggagccttccctcctcttcccagtcgaccagggtttcca
cctccagcatacgttatacctcctcctgtggctttctccatgagctcggggtacaccttc
ccaggtggggtttctgttccgggaacctttcttcagcctacggctcactcctctgcagga
aaccaagtgcaaggtgggaaacagtcccacattccttacagccagcagcggccctctgga
ccagggccaatgaaccagggacctcagacagcaccaccttcccagcaacccctttcatcc
ttacaagctcaggcaacagcacagtcagcaagccagttacaggtccaagctctggcccag
caacaacagtcccctacaaaagctgtgcagggcttggggaagagcccaccccaccactct
ggattccaacagtatccacaggcagactcatcaaagcagctctggaatcctcctcaagtg
caaggcccactgggaaagatgatgcctgtgaagcagccctattatcttcaggcccaggac
cccctaaaactgtttgaacagtcattacagcctcctgtaatgcagcagcagccgctggag
aaaaaaatgaagcctttccccatggagccatataaccataacccctcagaagtcaagatg
ccagaattttactgggactcctcctatggcatggctgatagagtagtgatggcacaacag
gcgaacatggatcgcagggggaaacgaccgcaaggagtcttccgcccagagcaggacact
gtgcccaggatggcttttgaggactccaagagctcccctctgcttcctccggacctgtta
aagagtctggctgccttggaggaggaggaagagctgattttctctaatcctcctgatctt
tacccagctctgctggggcctctcgcctctcttcctggacgaagcctctttaagtcccta
ctggaaaaaccatcagagctgatgtctcagtcatcttctttcctgtcactcactggcttc
tccctaaatcaggaaagatatccaaatagcagcatgttcaatgaggtatatgggaaaaac
cttaataccagcacaaaagcagaagtcactccctcaatggcccatcaggagacatcacta
tattctctctttgaagggacaccctggtctccatcccttccagcaagctcagatcattca
acaccagccagccagtctcctcactcctccaacccaagcagtttgccaagctctcctcca
actcataaccacaattctgttccattctccaactttggacctattggaactccagacaac
agggacaggaggattgcagaccgttggaaaacagataaaccagcaatgggaggatttggg
ctggactatcttccagcaacatcctcctcctccgagagcagctggcaccagaccagcact
cctagcggcacctgggcagcccatggccccttgatggaggattcctctgctgtgctcatg
gaaagcctgaagtccatctggtccagttccatgatgcatcctggaccgtcagccctggag
caactgttaatgcagcagaagcagaagcaacaacgcggacaaggccccatgaatccacca
cactga
DBGET
integrated database retrieval system
