Pelodiscus sinensis (Chinese soft-shelled turtle): 102461623
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Entry
102461623 CDS
T02980
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4
KO
K13126
polyadenylate-binding protein
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03015
mRNA surveillance pathway
pss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102461623 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
102461623 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102461623 (PABPC4)
03041 Spliceosome [BR:
pss03041
]
102461623 (PABPC4)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102461623 (PABPC4)
mRNA cycle factors
Stress granule specific factors
102461623 (PABPC4)
Spliceosome [BR:
pss03041
]
Complex C
Other components
Complex C specific factors
102461623 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
102461623
NCBI-ProteinID:
XP_006139196
Ensembl:
ENSPSIG00000016892
UniProt:
K7GFE8
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MNTAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEK
HEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRP
TYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAQASRGLPAA
AQRVGVATAAQNLAPRPPVTVPAPRAVPPYKYASAVRSPHPAVQPLQAPQPAVHVQGQEP
LTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLR
SKVEEAVAVLQAHQAKKEAAQKVGVVAATS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagctgctagtagctacccaatggcatcattgtatgttggcgatctgcatcct
gatgtcacagaggccatgttatatgagaagttcagccctgctgggcctgtactctccatc
cgagtctgccgggatatgatcacccgtcgctccctgggatatgcctatgtcaacttccag
cagccagctgatgctgagcgtgctctagacaccatgaactttgatgtgatcaaaggcaaa
cccatccgcattatgtggtctcagcgggacccgtccctgaggaagtcaggggttgggaac
gtcttcatcaagaatctggataaatccatagacaacaaggcactttatgacacattctca
gcatttgggaatattttgtcctgcaaggtggtgtgtgatgagaatggctctaagggctac
gcatttgtgcactttgagacccaggatgctgcagacagagccatcgagaagatgaacggc
atgctgctaaacgaccgcaaagtatttgtcgggagattcaagtcccggaaggagcgggag
gctgagctgggagccaaggcaaaggagttcaccaatgtttacattaaaaactttggggat
gacatggatgatgagagactaaaagagctcttcagcaaatacggcaagacgctgagtgtg
aaggtgatgaccgatcccactggaaagtccaaaggttttggcttcgtgagctttgaaaaa
catgaagatgccaacaaggcagtggaagaaatgaatggcaaagatatcaatggaaaaatg
gtatttgtagggcgggcacagaagaaggtagagcgtcaggcagagctgaaacggaagttt
gagcagctgaaacaagagagaatcagccggtaccagggtgtcaacctgtacattaagaac
ctcgacgacactattgacgatgagaaactgaggaaggagttttcaccttttgggtctatc
acaagtgccaaggtgatgctggaggatggacgaagcaaaggatttggcttcgtctgcttt
tcctctccggaagaagccaccaaagccgtgactgagatgaacgggcggatcgtgggctcc
aagcccttgtacgtggcgctggcacagaggaaagaggagcgaaaagcccacctcactaat
cagtacatgcaacgcatcgctggaatgagagccctgcctgccaacacaatcattaaccag
ttccagccagcggctggggggtacttcatgcccgctgtgccccaggctcagagcagaccc
acttactatgcacccaatcagatgacgcagatgagacctaacccgcgctggcagcaaggg
gggagacctcaaggcttccaaggcatgccgaatgccatgcgccagtccggcccccgccca
gcactgcgccatctggctcccgctggcaatgcccaggcctctcgtggcctccctgctgct
gcccagagagttggcgtggccactgcagcccagaatttagctcctcgtccgcctgttact
gtcccggctcccagagccgttcctccttataaatatgcctcagctgtccgcagccctcac
ccagcagtacagcctttgcaggcccctcagcctgcggtgcacgtacaaggacaggaacct
ttaacggcttccatgctagctgctgcccctccccaggagcagaaacagatgctgggagaa
cgcttgttccccctgatccaagctatgcaccccagcctcgcggggaagattacaggaatg
ctgctagagattgacaattcagagctactgcacatgctggagtctccggaatccctccga
tcaaaggtggaagaggctgttgccgtgctgcaggctcaccaagcgaagaaagaagctgcc
cagaaggtgggcgtggttgctgctacctcttaa
DBGET
integrated database retrieval system
