Pelodiscus sinensis (Chinese soft-shelled turtle): 102461734
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Entry
102461734 CDS
T02980
Symbol
HDAC4
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
102461734 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pss03036
]
102461734 (HDAC4)
Enzymes [BR:
pss01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102461734 (HDAC4)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
102461734 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
102461734
NCBI-ProteinID:
XP_006127520
Ensembl:
ENSPSIG00000018148
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPPRVNHMPSSVDVNTALPLQVAPASVPMDLRLDHQFSMP
VTEPTLREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLA
MKHQQELLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVL
SKKKALAHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDDFP
LRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTDSACNSAPGSGP
SSPNNSSNNISAENGITGSVTSIQAETSLAHRLANREGSVTQLPLYTSPSLPNITLGLPA
TGPASGGSGQQDAERLAIPTLQQRLSLFPGTHLTPYLSTTALERDGGTSHNSLLQHMVLL
EQPTAQTPLVTGLGALPLHAQSLVGAERVSPSIHKLRQHRPLGRTQSAPLPQNAQALQQL
VIQQQHQQFLEKHKQQFQQQQLHLNKMIPKPPEPARQPESHPEETEEELREHHALLEEPY
GDRVASQKEVQGLANMVTVKQEPIESDEEETELPLELEPGQRQAEQELLFRQQALLLEQQ
RIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDT
LMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSKCEVILRRKQTLEELQTVHSEAHA
LLYGTNPLNRQKLDSKKLLGSITSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVIE
LVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKILIVDWD
VHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDP
PMGDAEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQL
MGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRANANAVHSMEKV
IEIHSKYWHSLQRYASTVGYSLVEAQKCETEEAETVTAMASLSVGVKPADKRSDDEPMEE
EPPL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagatcagccagtagagctgcta
aatccacctagagtgaaccatatgcccagttctgtggatgtgaacacagcactgcctttg
caagttgcaccagcttcagtccccatggatctccgcttggaccaccagttttccatgcca
gtgacagaacctacactccgagaacagcagctccagcaggaactcttggctctcaagcaa
aaacaacaaattcagagacaaatccttatagccgagtttcagaggcagcatgagcaactc
tcccgtcagcatgaggcccagctacatgagcatatcaaacagcagcaggaaatgctagca
atgaaacaccagcaggagctcttggagcaccagcgaaagttggagcagcatcgccaggaa
caagagctggagaagcagcatagagaacagaaactacagcagctcaaaaacaaagagaaa
ggcaaagaaagtgctgtggcaagcacagaggtaaaaatgaaattacaggagtttgtttta
agtaagaagaaagctttggcacaccggaatctcaaccattgcatttctagtgatccccgc
ttctggtatgggaaaacgcagcacagttctcttgaccagagttctccccctcaaagtgga
gtatctggcacctacaatcatcctgtcctggggatgtatgattccaaagatgactttcca
ctcagaaaaacagcgtctgaacctaatctgaagttacgatccagattaaagcagaaagtt
gctgaaaggcggagcagccccctgttacgcaggaaagatggccctgtggttactgctctt
aagaagcgtcccctggatgtcacagactctgcctgcaacagtgctcctggatctggtccc
agctcaccaaacaacagctctaacaacataagtgctgagaatggaattacaggatcagtc
acgagcattcaggcagagaccagcctggctcaccgcctagcgaatcgtgaaggctcagta
acccagcttcctctctacacgtctccttccctgcccaacataacgttagggctgcctgcc
actgggcctgccagtggggggtcaggacagcaggatgccgaaagacttgctattcccacc
ctacaacagcggctttccttgtttcctggcacccacctcactccgtatttgagcactaca
gcgttggaaagagatgggggaacgtcacacaactctcttctgcaacacatggtcttactg
gaacagccaactgcacagacgcccttagtcacaggcttgggggcactccccctccatgca
cagtctctggttggtgcagaacgggtctccccttccatacacaaactccggcaacaccgc
cccctggggcgcacgcagtcggctccccttccccagaacgctcaggccctccagcagtta
gtgatccagcaacagcaccagcagttcctggagaaacacaaacagcagttccagcagcag
cagcttcacctgaacaagatgatccccaagccgcccgagccagcccgccagcctgaaagc
caccctgaggagacggaagaggagttgcgagagcaccacgcacttttggaggagccgtat
ggcgaccgagtcgcgagccaaaaggaggtgcaagggctggccaacatggtgacggtgaag
caagagcccattgagagtgatgaagaggagacggagctgccactggagctggagccaggg
cagaggcaagctgagcaggagctgctcttccggcagcaagccctcctgctggagcagcaa
cgcattcaccagctgagaaactaccaggcctccatggaggcagctggcatcccagtgtct
tttggcggacatcggcctctgtcccgcgcccagtcctcacctgcgtctgccaccttcccc
atgtctgtacaggagccccccactaagccaaggttcaccacaggcctggtctatgatacc
ttgatgctgaaacaccagtgtacctgtgggaacacaaacagccatccagagcacgcaggg
agaatccagagcatctggtcccggctccaggagacaggcctccgtagcaagtgtgaggta
atattgaggagaaaacaaactctggaagagctacagactgttcactcggaggcacatgcc
ctgctgtacggcacaaaccctttgaacagacagaaactggacagcaagaaactgctaggt
tccatcacatccatgtttgtcaggctcccttgtggtggtgttggagttgacagcgacaca
atttggaatgaagttcattcgtctggtgctgctcgcctggccgttggctgtgtcatcgaa
cttgtttttaaagtggccacaggagagctgaagaatggatttgctgttgttcgaccccca
ggtcatcatgctgaagagagtacgcccatgggcttctgctattttaattccgtggcaatt
gcagccaagcttctccagcagagactcagcgttagcaaaatccttatagtggactgggac
gtgcaccatgggaatggaactcagcaggctttctacagtgacccaaacgttctgtacatt
tctctacatcgctacgatgatggaaacttctttccaggcagtggtgctcctgatgaggtc
ggcaccggcgcaggcgttggtttcaatgtcaacatggcctttactggtggcctcgacccg
ccgatgggagatgccgaatatctgactgctttcagaacggtagtaatgccaattgccaat
gagtttgccccagatgtggtgctggtctcatctggttttgatgcagtggaaggccatcct
acgccccttggaggatataatctgtcagcaaaatgctttgggtacctgacgaagcagctg
atgggattggccggaggtcgaattgttctggccctcgaaggaggtcatgacctgacagcc
atttgtgatgcgtctgaggcatgtgtttctgctttgctgggaaacgagcttgatcctctt
ccggaaaaagttttgcagcagcgagcaaatgctaatgcagtgcattccatggaaaaagta
attgagatacacagcaagtactggcattcactccaacgctatgcctccaccgtgggctac
tccttggtcgaggcccagaagtgtgagacggaagaagcagaaacggtcacagccatggcg
tcgctgtcagtgggggtgaagccagctgataagagatcagatgatgagcccatggaagag
gagcctcccctgtag
DBGET
integrated database retrieval system
