Pelodiscus sinensis (Chinese soft-shelled turtle): 102461924
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Entry
102461924 CDS
T02980
Symbol
BCAN
Name
(RefSeq) brevican core protein
KO
K06795
brevican
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pss00535
]
102461924 (BCAN)
00536 Glycosaminoglycan binding proteins [BR:
pss00536
]
102461924 (BCAN)
04091 Lectins [BR:
pss04091
]
102461924 (BCAN)
Proteoglycans [BR:
pss00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
102461924 (BCAN)
Glycosaminoglycan binding proteins [BR:
pss00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
102461924 (BCAN)
Lectins [BR:
pss04091
]
C-Type lectins
Lecticans
102461924 (BCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
EGF
hEGF
ig
I-set
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
102461924
NCBI-ProteinID:
XP_006113956
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MTDTMLLLWVFARLAFTDAFISGDSTDDLKALSVSIAKHPPIRAVLSGTLTIPCHVTYVR
PLATSSTAGRRAVLGAPRVKWTFVSEGKEAEILVARGQKVKVSEGYRHRVSLPFYPASPT
DATLVLSELRSNDSGIYRCDVQHGIEDGHDLVQVKVKGVVFLYREGSTRYAYTFAKAQEA
CARIGAQIATPEQLYAAYLSGYEQCDAGWIADQTVRYPIQTPREACYGDMDGLPGVRNYG
VVDPEDVYDVYCYVEDLHGELFFGTAPDKFTLEEAKAHCQELGAEIATPGQMYAAWNEGL
DHCSSGWLADGSVRYPIVTPRERGGGSLPGVKTIFLFRNQTGFPDAQSRYDVYCFREETD
SFTESPEKHRATVPEGLKEIVTVTEQMEELQLPTAEVENESRGAIYTIPLFQATTDAEMP
RPSSVPEEAPIPVSQGSPINNSITSDLGLHLPPQSPESPASPEAGLMSYGAKPGSPASPH
EDGRKGGSRNCTEPPRNEEEHGTDPAQTLRSSLEGENVTAAIEETTHSSQQRSDGVPKLV
HPTAVFVGEPWSRAFHTQADMTDGDLTTSPTHVPAEISTKLAGSSDALHPNVSHGPIGSH
PAPGEEATVEGSTADVFEAHLPGVSGEVDFIPGSRKVDVLEPPARNTSSRVMEEDSGVLE
PTPTAAASAAPTAGWEGEDPKQPGQEAGDGELSTYRTLTYTSSPSRLVSGLSSTRFPDPG
RHLGAAEDAELSGEAALATAWPEGTPVIQDTLLSVPPGLGTSHLQESEEHSGSTWLPLPA
ATRSQVEDTGSVSRPEGTVTVSHTEAGQVHTALPPGGESPAENDTQMVGRELVAPPDSSV
RGPITSEEEETDEEQIVPSATMTTAALSPTGTPGELERDGCSSAPKDGLTSLPADVSKEA
SGPALEGIPFTDAPLTATRPLPVLPTDSASLGAGVNISGDCIPNPCMNGGTCSEERDRVS
CICLPGYGGVTCETDLEKCSSGWDNFQGSCYKHFSTRRSWEDAETQCRRYGGHLANIMTP
EEQDFINTQYKEYQWIGLNDRTIEGDFQWSDGSPVLYENWHLGQPDSYFLSGENCVVIVW
HDGGQWSDVPCNYHLSYTCKMGLVSCAPPPEIANAHWFGKPKQRYEINSIVRYRCLDGFT
QRHSPVVRCQEDGRWEQPQLSCEPRLGQTLDE
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccatgctgctgctctgggtatttgcccgtcttgcttttacagatgcattt
atctctggggacagtacagatgacctcaaggctctgagcgtctccatcgccaaacaccct
cctatccgggcagtgctgtcgggcaccctcaccatcccttgccacgtcacctacgtgcgt
cccctggccacctccagcacggcagggcgccgggcagtgctgggggcgccccgggtcaaa
tggaccttcgtctcagaggggaaggaggcggagatcctggtggcccgggggcagaaggta
aaggtgagcgaaggctaccgccaccgtgtctccttgcccttctacccggcctcgcccact
gatgccacgttggtgctgagcgagctccggtccaacgactctgggatctaccgctgtgac
gtgcagcacggcatagaggatgggcatgacctcgtgcaggtgaaggtcaaaggggtggtg
ttcctttaccgggagggctccacacgctacgcttacacctttgccaaggctcaggaggcc
tgtgccaggataggggcacagatcgctacccctgaacagctgtatgctgcttatctcagt
ggctacgagcaatgcgacgcaggctggattgcggaccagacggtcaggtaccccatccag
acccctcgtgaggcttgttatggagacatggatgggctcccgggtgtccgtaactacggc
gtcgtggacccagaagatgtgtatgatgtgtactgttacgttgaagatctgcatggagaa
ctctttttcgggacagccccagacaaattcaccctggaggaggccaaggcgcactgtcag
gagctgggagcagagatagcgacaccaggccagatgtatgccgcctggaatgaaggactg
gaccactgcagctcgggctggctggctgacggcagtgtccgctaccccattgtcaccccc
cgggaacggggcggcgggagcctgccgggagtcaaaaccatcttcctgttccggaaccag
actggattccctgatgcccagagcagatacgatgtgtattgctttcgagaagagacagac
tctttcaccgagtcaccagaaaaacaccgagccactgttcccgagggcctcaaggagatt
gtgacagtgacagaacagatggaggagctgcagctacccacagcggaagtggagaatgag
tcgagaggggccatctacactatccctctttttcaggccacaactgacgctgagatgcca
aggccaagcagtgtccccgaagaagcccctattcctgtctcccagggatccccaataaat
aattccatcacctccgatctaggacttcacttgccaccacaatcccccgagagcccggcc
agtcctgaggcaggtctgatgagctatggagcaaaaccagggagcccagcgtctccacat
gaggatgggagaaaagggggaagtagaaattgcacagagccacccaggaatgaggaagag
catggaactgacccagcgcaaaccttgaggtcttcattggagggagagaacgtgacggct
gccatagaggagacaacccacagcagccagcagagatcagatggggtgccgaaactagtt
catcccactgcagtgtttgtgggagagccatggtccagggccttccacacacaggcagac
atgactgatggagacttgaccaccagccctacgcatgtgccagcagaaatctcaacgaaa
ctagccggatccagcgatgcgctccatcccaatgtgtctcatggtcccattgggtcgcac
cctgcgcccggagaggaagccacagtagaaggcagtactgctgatgtctttgaggctcat
ctcccgggagtaagcggtgaagtggatttcatccctggttccaggaaggtggatgtgctg
gagccgccggctcgtaacaccagctccagggtcatggaggaggactctggggtgctagag
cccactcctacagctgcggcttctgctgcccccactgcagggtgggagggagaagatccc
aaacaaccaggccaggaggccggtgatggagagctttctacgtaccgtaccctgacctac
acttcctcaccgagtaggcttgtttctggattgagcagcacacgcttccctgacccgggc
agacacctgggtgctgctgaagatgcagagctatctggagaggcagctctggctacagca
tggccagaaggcaccccagtgattcaggataccctgctctcggtaccccctggtttggga
acgtcccacctccaggagagcgaggaacactcgggttctacttggcttccgctgcccgcc
gccacccgctcccaggtggaggacacaggctctgtctcccgacctgaggggacggtgact
gtttcacacacagaagcaggccaggtccataccgcactgccccccggtggggaatctcca
gccgagaacgacacccagatggtgggacgtgagttggtggcgccgcctgactccagcgtg
cgcggccccatcacctctgaggaggaggagactgatgaagagcaaattgttccctccgct
accatgacaacggcagccttatcccccacgggtactcccggagaactagaacgggacggg
tgttcgtctgcccccaaggacggtctcacctccctccctgcagatgtctccaaagaagca
tcgggcccggcattggaggggatccctttcacagatgcccctttgaccgccacccgccct
ctccccgtcctgccaacagacagcgccagcctgggagcgggggtgaacatttcaggtgac
tgcatcccaaacccttgtatgaacggagggacctgcagcgaagaaagagaccgcgtcagc
tgcatatgtctgccaggctatggaggagtcacctgtgaaacagatctggagaagtgcagc
tcgggctgggacaacttccaggggtcctgctacaaacatttctccacccgaagaagttgg
gaggatgcggaaactcagtgcaggcgctacgggggccacctggccaacatcatgacgccg
gaagagcaggacttcatcaacactcagtataaggaatatcagtggatcggcctgaacgac
cgaaccatcgaaggcgattttcagtggtccgacgggagcccggtgctctatgagaactgg
cacctcgggcagccggacagttacttcctgtctggagaaaactgtgtggtcatagtgtgg
catgacgggggccagtggagtgacgtgccttgtaactatcacctgtcctacacctgtaaa
atgggtctagtgtcttgcgcccctccgcccgagatagcgaacgcccactggtttggcaaa
ccaaagcaacgctatgagatcaactccatcgtacggtaccggtgtctggatggtttcacc
cagcgccactcacccgtggttcggtgccaggaggacggccggtgggagcagccgcagctc
agctgtgagccgagactgggccaaaccctcgatgagtga
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