Pelodiscus sinensis (Chinese soft-shelled turtle): 102462088
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Entry
102462088 CDS
T02980
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03030
DNA replication
pss03410
Base excision repair
pss03420
Nucleotide excision repair
pss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102462088 (RFC4)
03410 Base excision repair
102462088 (RFC4)
03420 Nucleotide excision repair
102462088 (RFC4)
03430 Mismatch repair
102462088 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pss03032
]
102462088 (RFC4)
03036 Chromosome and associated proteins [BR:
pss03036
]
102462088 (RFC4)
03400 DNA repair and recombination proteins [BR:
pss03400
]
102462088 (RFC4)
DNA replication proteins [BR:
pss03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102462088 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
102462088 (RFC4)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102462088 (RFC4)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102462088 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
102462088 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
AAA_28
SLFN-g3_helicase
AAA_14
Mg_chelatase
AAA_24
DUF815
RuvB_N
AAA_5
AAA_23
Rad17
AAA_19
ABC_tran
AAA_3
ResIII
bpMoxR
AAA_7
nSTAND3
AAA_18
RNA_helicase
AAA_25
TIP49_C
Motif
Other DBs
NCBI-GeneID:
102462088
NCBI-ProteinID:
XP_006138539
Ensembl:
ENSPSIG00000017443
UniProt:
K7GHC8
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MHISVFSSSRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILALAREL
YGPELFRQRVLELNASDERGIQVIREKVKAFAQLTVSGNRPDGKICPPFKIVILDEADSM
TSAAQAALRRTMERESKTTRFCLICNYISRIIEPLTSRCSKFRFKPLTDKIQRQRLLTLS
EKENVKVSNEAISCLVQVSEGDLRKAITFLQSATRLTGGKEITEKIVTEIAGIVPKETID
GLLSACQSGSFEKLETVAKNLINEGYAVALLVNQLHDDIVEREDLTDKQKSIIAEKLAEV
DKCLTDGADEYLQLISLCAIVMQQLTQNS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcacatatctgtcttttcatctagtcgtccaaaatgtgtggatgaagttgcattccaa
gaggaagtcgttgctgtgctgaaaaaatccttagaaggagctgatcttcccaatctctta
ttttatggtccacctggaactggaaagacttccaccattttggcattagccagagaactc
tatgggcctgaattgttccgacagagggtgcttgagttaaatgcttctgatgaacgtgga
atacaagtgattcgagagaaagtgaaggcttttgctcagttaactgtatctggaaatcgc
ccagacggtaagatttgtcctccttttaagattgtaatcttggatgaagcagactctatg
acttcagcagctcaggcagccttaagacgtactatggagagagaatctaaaactacacgc
ttctgccttatttgtaattacatcagcaggataattgaacccttaacatctcgatgctct
aaattccgtttcaagcccctgacagataaaatccagcggcagagactcctgaccctttct
gaaaaggagaatgtgaaagttagcaatgaggcaatatcttgtcttgttcaagtgtcagaa
ggagacttaagaaaagcaatcacatttcttcaaagtgctactcgattaacaggtgggaaa
gagatcacggagaagattgtcactgaaattgcagggattgtccctaaggaaacaattgat
ggcctgctctctgcctgtcaaagtggctcttttgaaaaactggaaacagtagcaaagaat
ctgataaatgaagggtatgctgttgctttgcttgtaaaccagcttcatgatgatattgtt
gagagagaagatctcactgacaagcagaaatctattattgcagagaagcttgctgaggta
gacaaatgcttgacagatggtgcagatgagtacttgcagctgatcagtctctgtgccatt
gtgatgcagcaattaacacagaacagctag
DBGET
integrated database retrieval system
