Pelodiscus sinensis (Chinese soft-shelled turtle): 102462138
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Entry
102462138 CDS
T02980
Symbol
TRIM28
Name
(RefSeq) LOW QUALITY PROTEIN: transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pss01001
]
102462138 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pss04121
]
102462138 (TRIM28)
Enzymes [BR:
pss01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102462138 (TRIM28)
Protein kinases [BR:
pss01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
102462138 (TRIM28)
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102462138 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-B_box_Trim66
Motif
Other DBs
NCBI-GeneID:
102462138
NCBI-ProteinID:
XP_006133042
Ensembl:
ENSPSIG00000013810
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
HVLFFSPSLAVVDCPVCKHQCYLKDIVENYFLRDSGAEAATDSKDANQCCTSCDDNAPAT
SYCVECSEPLCETCVEAHQRVKYTKDHTVRATGPAKTKEGERTVYCSVHKHEPLVLFCDT
CDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKMLAALVKRLGDKHANLQKSTKEVRTSIRQ
VTDVQKRVQVDVKMAILQIMKELNKRGKVLVSDAQKVTEGQQEKLERQHWAMTKLQRHQE
HILRFASWALESDNNTALLLSKKLIYFQLHRALKMIVDPVEPQGEMKFQWDLNAWTKSAE
TFGTIVSERSGVPQAAAPNAQIQRANATGPAAGGGVKQVSGTPQVLAPLTNVPPMVPNRP
GAAVSQSQPPPLQPPVQPARILTAPVVKSGAGSTYVQPMQLQLVQPRGLLQMNGQQQVMG
QLVLLPQVNGTQGVQQVAMQSTIVSKGQMAPGALLQPTNSQDCFIGDGNLLQSSTVQPMD
TQEEGFGDLADSTEAHVSGMKRPRSSDGNVMRKVPRVSLERLDLDLTGXFPGNSNEDYNL
IVIERGAQQAATQPPGATQPGAIVKEEQMEAAIEYPTEEPRDTKPIVLPQDALAAEGSMS
RLISPSGSGGSGLDVTASQNPEGGTGAANAAHCRVCRKAGSVVMCNQCEQCYHLDCHLPV
LQEIPSQEWKCLLCQELPEAGDEDGTHFSMSEDASPKKLSPLEQRKCERVLLELLCHEPC
RPLHRLSNATEGQNTIDLTLIRAKLQEKLSPPYGSSNEFAQDVWRMIKQFNKLTEDKEDV
QSIIGLQRFFEAKWSAAFGDRKFSSVLVEPIPLDXSSGARAAAASPTAAPHLAPWGLLPL
SLLALERRSEGLASIDQSSCLALRGQ
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
catgttctcttcttctccccttcccttgcagttgtggactgccctgtatgtaaacatcag
tgttacctcaaggatatcgtggaaaattacttcttgagagacagcggggcagaggcagcc
acagatagcaaggatgccaaccagtgctgcaccagttgtgatgacaatgccccagctact
agctattgtgtggagtgctcagagccactgtgtgagacctgtgtagaggcccaccagagg
gtgaagtacacaaaggaccatactgtcagagccacaggtccagcaaagacaaaggagggt
gagcgcactgtctactgctctgtgcacaagcatgaacccttggtgctgttttgcgatacc
tgtgacacactgacctgccgggactgccagctcaatgcccacaaggatcaccagtaccag
ttcttggaggatgctgtcaggaaccagcgcaagatgttggccgctctagtgaagcgcctc
ggggacaagcatgccaacctgcagaaatccaccaaggaagtgcgcacctcgattcgtcag
gtgacagacgtgcagaagcgggtgcaagtggatgtgaagatggctatcctgcagatcatg
aaggagcttaacaagaggggcaaagtcctggtcagtgatgcacagaaagtgactgagggg
cagcaggagaagctggagcgtcaacactgggccatgaccaagctgcagcgccatcaggag
cacatcctgcgttttgcttcctgggccctagagagtgacaacaatactgccctgctgctt
tccaagaaactgatctacttccagctgcaccgtgccctcaaaatgattgtggaccctgtg
gagccccaaggggaaatgaagtttcagtgggatcttaacgcctggaccaagagtgcggag
accttcggaacaatagtctcagagcggagtggtgtcccgcaggccgcggcccccaacgcg
cagatccagcgtgccaacgccaccggcccggcagcgggaggaggggtgaaacaggtctcc
ggcactccccaggtactggctcctcttacgaatgtccctcccatggtcccgaaccggcct
ggggcagctgtctcccagagccagcctccccctctgcagccgccagtgcagcccgcccgg
atcctcacggcccctgtggttaagagtggtgccggcagcacctacgtacagcccatgcag
ctccagctggtgcagccccgcggcctcctacagatgaacggccagcagcaagtcatgggc
cagctggtgcttctgccccaggtcaatgggactcagggtgtgcagcaagtcgcaatgcag
tccaccattgtcagcaagggacagatggccccaggagccctgcttcagcctaccaacagc
caggattgcttcatcggtgatggtaacctcttgcaatcctctactgtgcagcccatggac
acccaggaggaaggctttggagaccttgccgacagcactgaggcccatgtttcaggaatg
aagaggcccaggtcctctgacggcaacgtcatgcgcaaggtgcctagggtgagcttggag
cggctggacctggacctaacaggtnncttccctggcaacagtaatgaggactacaacctg
attgtcattgagcgtggggcccagcaggctgccactcagcctcctggtgctacccagccc
ggagccatcgtcaaggaggagcagatggaggcggccatcgaatatccaactgaggagccc
agagacaccaagcccattgttctgcctcaggacgccctagctgccgagggatccatgtcc
cgcctcatctcccccagtggcagcggcggctcgggtctggacgtgacagccagccagaac
ccggagggaggcacgggggcagcgaacgctgcccactgcagagtgtgccggaaggccggc
tctgttgtgatgtgtaaccagtgtgagcagtgctaccacctggactgccacctccctgtg
ctgcaggagatccccagtcaggagtggaagtgcctgctgtgccaggaactgccagaggcc
ggtgatgaggatggcacccatttctccatgtccgaagatgcgagtcccaaaaaactctcc
cccttggagcaaaggaagtgtgagcgtgtcctgctggagctgctttgtcatgagccgtgc
cggcctctccaccggctgtcaaacgccacagagggccagaacactattgacctgaccctg
atccgagccaaactgcaagagaagctctccccgccctacggctcctccaatgagtttgct
caggatgtctggaggatgatcaagcagttcaacaagctgacagaggacaaggaggatgtc
cagtccatcatcgggctgcagcgcttcttcgaggccaagtggagcgccgcctttggcgac
cggaagttctcctctgtgttggtggagcccatcccactagatnngagcagcggagcgaga
gcagcagcagcttcacccaccgcagctccccatctggctccctgggggctgctgccactg
tctctgctggcgctggagaggaggagtgaggggctggccagcatagaccagagcagctgc
ctggcattgcgtgggcagtga
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