Pelodiscus sinensis (Chinese soft-shelled turtle): 102462597
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Entry
102462597 CDS
T02980
Symbol
ATM
Name
(RefSeq) serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03440
Homologous recombination
pss04068
FoxO signaling pathway
pss04110
Cell cycle
pss04115
p53 signaling pathway
pss04210
Apoptosis
pss04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102462597 (ATM)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
102462597 (ATM)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102462597 (ATM)
04210 Apoptosis
102462597 (ATM)
04115 p53 signaling pathway
102462597 (ATM)
04218 Cellular senescence
102462597 (ATM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pss01001
]
102462597 (ATM)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pss03032
]
102462597 (ATM)
03036 Chromosome and associated proteins [BR:
pss03036
]
102462597 (ATM)
03400 DNA repair and recombination proteins [BR:
pss03400
]
102462597 (ATM)
Enzymes [BR:
pss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102462597 (ATM)
Protein kinases [BR:
pss01001
]
Serine/threonine kinases: Other
PIKK family [OT]
102462597 (ATM)
DNA replication proteins [BR:
pss03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102462597 (ATM)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
102462597 (ATM)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
Check point factors
Other check point factors
102462597 (ATM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
M-HEAT_ATR
HEAT_ATR
TTI1
Motif
Other DBs
NCBI-GeneID:
102462597
NCBI-ProteinID:
XP_014429253
Ensembl:
ENSPSIG00000006045
LinkDB
All DBs
Position
Unknown
AA seq
3061 aa
AA seq
DB search
MSLVLHELLVCCRQLENDKVTERKKEVEKFKRLICDSETINQLDHNSDSKQGKQLNWDAV
FRYLQKYILKETESIRLAKPNVSASTQASRQKKMQEISGLVKYFIRCANKRAPRLKCQEL
LCYVMDVVKDASSCAIYGADCSSILLKDILSVRKYWCEISKQQWSDLLTLYCKLYLKPSK
DINRVLVARIIHTLTSGYCFQTDELNSNLFCFFAKALQCARQENASAGLDHILAAINVFF
SVFAMNCRMRICKLGEEILPTVLYIWTQYRPKDSLKELIIQLLQLQIRVHHPKGAKTQEK
GAYVSEKWQRILYNLYDLLVNELSLIGSRGKYSSGSRNIAVKENLIELMADICHQVFTED
TKILEITQSYTVTQREPGDEVVPSKRRRIELGWEIIRDSLQKSQNDFDVIPWLQITTRLI
SKYPMSLPNCELSPLLTILHQLLPQQRQGARAPYVLRCLIEVALCQTQKLDLESTQKLEL
QRIWAKVWSLTVRSISFQQVETESFRLLGAIIKGNLVVIDKELWKIFSGFACKPSSPAAR
CLALAMTAYAVPETLKVGMLQNNCGGNSAYTLKEAIMKWLLFCHLEEEMEECVELPPVLC
SDFPHLVLQKILVSLTLKNCRAAMNFFQNATECVQHSQDKEEVSFLEIEELYLQTTFDEM
AIFNSLAVNIADKILPGSGLAVNQNHKETLKHCLLVLSEQLLNSYSSEINSKSATAEHLV
RCASLLTGVLSCYCYVGTLTEEDACKSELFHKAKSLMHYVGESISQSKSKLNEDARIIML
RTLITQCTNCLCNCTKNSPSKILSDLFLCLLTSKMMNDLIDICKHLMVFTGKLSDGREGD
LMEGDIEESPKEVNNSIAVDQFDDFCITDFGDANESGEMQNIIGAMNPLAEENLTKHDLL
LLEILRLLCRCVTTTQNHTVCFRALDIRRKLLMLIDRSIFDIAKSLHLQVYLVLLKELPA
KENLLPEDDLLMLLKPLPDICSSYRRDQEVCKAILNNLLPTAVGLGQANPNVEETGEVQG
QFLTVVGAFWHLTKERKCTAPVRMALLNCMKALLEADPHSNWAVLNVQDKDLPVRDALPH
FLADSHHHVCMLAAKSITSLFQDVKQRDSSGLPKALPLTFQQKAFENVYLRVQEGMRVLV
RGDMSPEDLLDEQCNRRAVLLMLITMVLCCSPVCEKQALFAICQSVKENGLEPHLIKKVL
ERVSNVFGYKSVEDFMTSQLDYLVLEWLRMQDNGYSLSAFPYVVLNYSSLEAFYRSCYKV
LVPHLVIRSQFEDVKSVANLIGKDWRQLLADCFPKILVNILPYFAYESHGDSEIAQQRDA
AYKVYDMLKDENCLGKQNIDNLSHSNLPEIVVELLMTLHEPAGTTTGEGADLSKFTGELD
PAPNPPHFPSYVIKATLDYISRCHKTKLKSIVAVLSKNPDSFQKILLAICKQSADTNNIY
KKHRILIIYYLFVNLLLKEIKNGLGGAWAFVLRDIIYTLIHYINSSLGRDMYTRSFSLCC
DLLNRVCHAAVTYCKDALENHLHVIVGTLISVIGDQPENEQQVLDVLTYLVIDNKDNENL
YQSIKHLDPFPERPAFKDLCATQQKIKYSKGAFSLLEEINHFLSVCVCDSLPLARLEGLN
DLRKQLEQHKDQMKDLMKHFQENPQNCVIVKLVVCLLQLSKKAVNHTGEKAVLEAVGSCL
GELGPIDFSTITLQHRKNAFSSKAADLFEDRERQWVFIMLTLINSALIDDCIGVRSAAAA
CLKNILATKTGNDFWDVYKIKADPMLIYLHPFRISKKKFLEVPSNERESPSENLDDASVW
IPQSESHDTWIKTLTCSLLDSGGVKNEVLQLLKPMCEVKTDFCQTLLPFLIHDILLHDSN
ESWRNLLSMHIQRFFTTCCRYSSSSSRSATPANSNSEPETLVRGGVDKISRQTMLNVVDY
LRSQKRSLSGTVFDDSFWLELNYLEVAIVAQSCAAHFTALLCTEIYADKINLDKQQKRSA
FKASKNLTFEEESQSPTINSLNEKSKEETGISLQDLLMEIYRSIGEPDSLYGCGGGRMLQ
PLARIRTYEHEAIWGKALVTYDLEASLPPATRQAGIIEALQNFGLCHTLSTYLKGLEYEN
TEWCAELKEIRYQAAWRNMQWDHISSAKDELGRPGYHESLYDALQSLRDREFSAFYESLK
DARVNEVEELCRGSLESVFSLYPTLCRLQTIRELENIGQLFSRSVTNKQLNDVYLKWQRQ
SQLLKDSDFGFQEPVMALRTVVLEILLEKESENSKRECIKEILTKHLVELSKLARIAKNT
QLPERAMFQIKQYNPAVCIASEWQLEEAQVFWAKKEESLALSILKEMIKKLDTNWFQVEN
DPNLRLIYTECLRLCGNWLAETCLENPTVIMQKYLEKAVEVAGSHNGDSNDELKSGKMKA
FLSLARFSDTQYQRIENYMKSSEFENKQALLKKAKEEIGLLREHKVQTNRYTVKVQRELE
LDECAIRALREDCKRFLCKAVENYISCLLSGEEHDMWIFRLCSLWLENSAVFEVNGMMEK
EAEKIPSYKFLPLMYQLAARMGTKTMGSLGFHEVLNNLISRISLDHPHHTLFIILALANA
NKDELLAKPEAAKRNRLTKNVPKEISQPDMDRMEAATNIINIIKSRRAQMVSGVEALCDA
YITLANLDATPWKSQRSNRSIPKNLEDVVVPTMEIKVDPTGKYENLVTIRSFKPEFRLAG
GLNLPKIIDCIGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQQNTETRKRKLTIRR
YKVVPLSQRSGVLEWCSGTAPIGEFLVNPEEGAHRRYRPKDYSSSYCQKTMMEAQKLHSE
EKYNMFMDICQNFKPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYILGLGDRHVQ
NILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRCCEKT
MAVMRNSQEALLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDEADINSTLNASDQEGNRK
ARDDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSRLFPGWKAW
V
NT seq
9186 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgtgctacatgagctgcttgtttgctgccgtcaacttgaaaatgacaaagtt
acagagcgaaagaaggaagttgaaaaattcaaacgactcatctgtgattctgaaacaatt
aaccaactggatcataattctgactctaaacaaggaaaacaactgaactgggatgctgtg
tttaggtatctgcagaaatacatcctaaaagaaacagagagtatcagactggcaaaacca
aatgtatctgcctcaacacaagcttctagacagaaaaagatgcaagagatcagtggcttg
gtcaaatattttattagatgtgctaataaaagagcaccaagattaaaatgtcaggaactc
ctgtgttatgtcatggatgtagtgaaagatgcatcaagttgtgctatttatggagctgac
tgtagtagcatactactaaaggatattctttcagtgaggaaatactggtgtgagatatct
aagcaacagtggtcagatctgctgaccctgtactgcaaattatatctcaaaccttccaaa
gatattaacagagtcttggtggctagaataatccacacactcaccagtggatactgcttc
caaactgatgaactaaattccaatcttttttgcttctttgcaaaagcactacaatgtgca
aggcaagagaatgcatctgcaggtctggatcacattcttgcagcaattaatgtcttcttc
agtgtgtttgctatgaactgtcgtatgcggatttgtaagctaggagaagaaattcttcct
acagtgctttatatatggactcagtatagaccaaaagattctctaaaagagttaataatt
cagttacttcaactgcagattcgtgttcatcatccaaagggagccaaaacacaggagaaa
ggtgcatatgtctcagaaaaatggcaaagaatcttatacaacttgtatgatctgctggtg
aatgagttaagtctcattggcagtagaggaaagtattcttcaggatcacgcaacattgct
gtaaaagaaaacctgattgaattaatggctgatatttgtcatcaagtctttactgaagac
accaaaatcctagagataacccagtcatacactgtcacacaaagagagcctggagatgaa
gttgtaccaagcaagcgtagaaggatcgaactaggctgggaaataattcgagacagcctg
caaaaatcacagaatgattttgatgtcataccttggttacagattacaacccgattaata
tcgaagtatcctatgagtcttcctaactgtgaattatctcccttactcactatattacac
caattactacctcagcagagacaaggggcgagggccccgtacgtgctaaggtgtcttata
gaggttgcattgtgtcagacccaaaaattggatttggaaagcacacaaaagttggagctg
cagagaatctgggcaaaagtttggtcacttacagttcgtagcataagttttcagcaagtt
gaaacagaaagcttcaggttacttggagccataattaaaggaaaccttgttgtaatagac
aaagaactctggaagatattttcaggatttgcatgcaagccttcaagtcctgctgcacgt
tgtttggcattagcgatgactgcctatgccgtaccagaaactttgaaagtaggaatgtta
cagaataattgtggaggaaattcagcctacacattaaaagaagcaataatgaaatggcta
ctgttctgtcatttggaagaggagatggaagaatgtgtggagctaccacctgtgctatgc
agtgattttcctcatctagttctgcagaaaattcttgtgagcctgactctgaagaactgt
agagctgcaatgaactttttccagaatgctactgagtgtgtgcaacattcacaagataaa
gaagaagttagttttttggaaattgaagagctgtatctacaaacaacttttgatgaaatg
gctattttcaacagccttgcagtgaacattgcagataaaattctgcctggctcaggactt
gctgtcaatcaaaaccataaagaaacactgaagcactgtctgttagtactgtcagaacag
cttttaaacagctactcttctgagattaattccaagtctgctactgcagaacacctcgtc
cgatgtgccagtctcctcactggcgttcttagctgctattgttatgttggcacattaact
gaagaagatgcatgtaaatcagaattgttccataaagctaagtctctcatgcattatgtt
ggagaaagcatttctcagtctaaaagtaaactaaatgaagacgctaggatcatcatgttg
aggactttgataacacagtgtaccaactgcttatgtaattgtaccaagaacagtccaagt
aagatcttatcagacttattcctgtgtttgttgacatcaaagatgatgaatgatctgata
gatatttgcaaacatctgatggtctttaccggcaaactaagtgatggcagagaaggagac
ctaatggaaggtgatattgaggagagtccaaaggaagtaaataactctatagccgtggac
caatttgatgatttctgtatcactgattttggtgatgcaaatgagtctggggagatgcaa
aacataataggtgctatgaacccattagctgaagaaaatttgacaaagcacgatttactc
ctccttgaaattctgaggctcttgtgtcgatgtgtaactacaacacaaaaccatacagtc
tgcttcagagcacttgacatacgacggaagctgttgatgctaattgatagaagtatattt
gatattgctaaatcactgcatctacaagtgtatttagtccttttgaaggaactccctgct
aaagaaaatttgttgccagaagatgatcttctaatgcttctcaagcctcttcctgacatt
tgttcctcatatcgtcgagatcaagaagtttgtaaagcaattctaaataatctgcttccc
acagcagtggggctgggccaagccaacccaaatgttgaagaaacaggagaagtccaagga
caatttttaactgttgttggagcattttggcacttaactaaggaaaggaaatgtacagct
ccagtaagaatggccctactgaattgcatgaaagccttacttgaggctgatcctcattca
aattgggctgtacttaatgtacaagataaagatctacctgtgagagatgctttaccacat
ttcctcgcagatagccaccatcatgtttgcatgcttgctgcaaagtcaataaccagtttg
ttccaagatgtgaaacaaagagattcttctggattaccaaaagctcttcctttgacattc
cagcagaaggcttttgagaatgtatacctgagagttcaagaaggaatgagagtcctggtg
cgtggtgacatgagccctgaagatctcttggacgagcagtgtaatagaagagcagttctg
ctgatgctcataaccatggttttatgttgcagtcctgtgtgtgaaaagcaggctttgttt
gctatttgccagtctgtgaaagagaatggattagagcctcatcttataaaaaaggttttg
gagcgagtgtcaaatgtttttggctataaaagtgtagaggacttcatgacttcccaatta
gactatctggtgctggagtggctgagaatgcaagataatggatatagcctatctgctttt
ccttacgttgttttgaactactctagccttgaggcattctacaggtcttgttataaagtt
ttggttccacacctggtgattagaagtcagtttgaagatgtgaaatctgttgctaacctg
attggaaaagattggcgtcagcttctagcagactgctttccgaagatacttgtaaatatc
cttccctattttgcctatgaaagccatggtgatagtgaaatagcacaacagagagatgca
gcttataaagtctacgacatgcttaaggatgaaaattgcttaggaaaacagaacattgac
aatttatctcacagtaacttgccagaaattgtggtggagctgttgatgaccctacatgaa
ccagctggcactaccacaggagaaggagctgacctaagtaaatttacaggggaactggat
cctgctcctaatcctcctcattttccatcttatgtaatcaaggcaaccttggattatatt
agccgttgtcataaaaccaagttaaaaagtattgtagctgtactttctaaaaatcctgat
tcgttccaaaaaatcctactagccatatgcaaacagtcagctgatacaaacaatatttac
aaaaagcacagaattcttatcatttattacttgtttgttaatttgttacttaaagagata
aagaatggtttaggaggagcatgggcttttgttcttcgagatataatttatactctgatt
cactacatcaacagcagtcttggaagggacatgtacacgcgcagcttctccctctgctgt
gatcttctaaatcgtgtttgccatgcagcagtcacatattgtaaggatgccctagagaat
cacctacatgttattgtaggcacgctaatatctgtcattggggaccagcctgaaaatgaa
cagcaggtcctagatgtgttgacatacctagtgatagataataaggataatgaaaactta
taccaatcaattaaacatttagatccttttcctgagcgtcctgcatttaaagatttatgt
gctactcagcagaaaatcaaatacagtaaaggagcattttcacttttggaggaaattaac
catttcttatcagtatgtgtctgtgactcactgccactggcaagacttgaaggattaaat
gatttacgcaaacagttggaacaacataaagatcagatgaaggacctcatgaaacatttc
caagaaaatccccagaactgtgtcatagtaaagttggtggtgtgcttgctgcaactatct
aaaaaagcagttaaccatacaggtgaaaaggcagttttagaggctgttggaagttgtctg
ggagaactgggtcctatagatttctcaacaataactctgcaacacaggaaaaatgcattc
tcttccaaggcagctgacttatttgaagatagagaacgtcagtgggtcttcataatgctg
actctaataaatagtgctttaatagatgattgtattggtgttcgatctgctgctgcggcc
tgtttgaaaaacattttagctaccaagactggtaacgacttttgggacgtttacaaaatc
aaagctgatcccatgttaatatatctacatcctttcagaatatctaaaaagaagttttta
gaagtaccaagtaatgaaagagagagtccttcagaaaacctggatgatgcaagtgtgtgg
attcctcagagtgagagccatgatacctggatcaagaccctgacttgttcattactggac
agtggaggagtgaaaaatgaagttcttcagttactaaagccaatgtgtgaagtgaaaaca
gacttttgtcagactttgctcccattcctgattcatgatatcttgcttcatgattcaaat
gaatcttggcgaaatcttctgtcgatgcatatacagaggtttttcacaacttgttgcaga
tactcctcgtcatccagcagatcagctacacctgcaaattccaattcagagccagaaact
cttgttcgtggaggtgtagataaaatatctcgccaaacaatgcttaatgttgttgattac
ttgagaagtcaaaagaggtctctttcaggtacagtttttgatgacagtttctggctggag
ttgaattaccttgaggttgctatagtagcacaatcttgtgctgctcacttcacagcttta
ctctgtacagaaatctatgcagacaagataaacttagacaaacaacaaaaaagatcagct
ttcaaagcatctaaaaatctaacatttgaagaagaaagccaaagtccaactattaacagc
ttgaatgagaaaagtaaagaagaaactggcatcagtttacaggatcttctcatggaaata
tacagaagtataggagagcctgatagtctctatggctgtgggggaggaagaatgttacag
ccattagctaggataagaacatatgagcacgaggccatatggggaaaggcccttgtaaca
tatgaccttgaagcaagcctccctccagctactcgccaggcaggaataatagaggccttg
cagaattttgggctttgccatactctttccacctatttaaaaggcttagaatatgaaaat
acagagtggtgtgctgaactaaaggagattcgttaccaggcagcttggaggaacatgcag
tgggaccacatctcttctgctaaagatgagctgggaagaccaggctaccatgaatcattg
tatgatgcgctgcagtctttaagagacagagaattttctgctttctatgaaagcctgaaa
gacgccagggtgaatgaagtagaggagctgtgcagaggcagtctagagtctgtgttttca
ttgtatcccacactctgcagattacagaccattagggagttggagaacataggacaactt
ttctccagatctgttactaacaaacaactgaatgatgtttatctgaagtggcagagacag
tcccagcttctcaaggacagtgactttggtttccaggagcctgtcatggccttacgcact
gtagttttggagatccttcttgagaaggagagtgagaattccaaaagagagtgcattaag
gaaattctcaccaaacatctagtggaactgtccaaattggcacgaattgccaaaaacact
cagcttcctgaaagagcaatgtttcagatcaaacagtacaatccagctgtgtgtatagcc
tctgagtggcaactggaggaagctcaggttttctgggctaaaaaagaagagagtctagca
ctgagcattctcaaggagatgatcaagaaattggatacaaattggtttcaggttgagaat
gatccgaacctaagactgatatatacagagtgtctgcggttatgtggaaactggttagca
gaaacatgcttggaaaaccctacagttatcatgcagaaatacttagaaaaggcagtggaa
gttgctgggagtcacaatggagacagcaatgatgagctaaagagtggaaagatgaaggct
ttcctttctttggctcgtttctctgatactcagtaccaaagaattgagaactacatgaaa
tcctcagagtttgaaaacaagcaagctttgctgaagaaggccaaggaggaaattggcctc
ttaagggagcacaaggttcagacaaacagatacacagtgaaggttcagcgggagcttgaa
cttgatgaatgtgcaattcgtgcactaagagaggattgtaaacgtttcttgtgcaaagcg
gtagagaactacatcagttgcttacttagtggagaagagcatgacatgtggatcttcagg
ctctgctccctctggcttgagaactcagcagtttttgaagtcaatggaatgatggagaaa
gaggcagagaagattccgtcatacaagtttttgcctctgatgtaccagctggctgctcga
atgggaaccaagacaatgggctctctaggatttcatgaagttttaaataatctaatatct
agaatttcactggatcatccacatcatactttgtttataatattggctttggcaaatgcc
aacaaggatgaactcttggcaaaaccagaggcagcaaaaagaaacagactaacaaaaaat
gtaccgaaagaaatctcccagcctgatatggatcgaatggaggctgccaccaatataatt
aacatcataaaaagtaggagggcccagatggttagcggtgtagaggcactttgtgatgca
tatatcacattagcaaatctggatgccactccctggaaatctcaaagaagtaacagaagt
attcctaaaaacttggaggatgttgttgttcccacaatggaaattaaggtggaccctact
gggaaatatgaaaatttggtgacaataagatcattcaagccagagtttcgcttagcagga
gggctgaatctgcctaaaataatagattgtataggatccgatggaaaagagaggagacag
cttgtcaagggccgggatgacttgaggcaggatgctgtcatgcagcaggttttccagatg
tgcaatacactgctccagcaaaacactgaaaccagaaaaagaaaactcaccattagaaga
tataaggtggttcccctttctcagagaagtggtgtcctggagtggtgctctgggacagcc
cccattggtgaattccttgttaatcctgaagagggagctcacagaagatacaggccaaaa
gattacagcagttcttactgccaaaagacaatgatggaagcacaaaaactgcattctgaa
gagaaatacaacatgtttatggatatttgccagaattttaagcctgtgtttcgctatttc
tgcatggaaaaattcctggacccagctgtttggtttgagaaacgcttggcatatactcgc
agtgtggctacgtcatctatcgttggttacatacttgggcttggagatagacatgtacag
aatatcttgatagacgagcaaactgcagaattggtgcacatagatctaggggttgctttt
gaacagggcaaaattcttccaacaccagagactgttccctttaggttaacaagagacatt
gtggatggtatgggtatcactggtgtggaaggagtctttagaagatgctgtgagaagact
atggctgttatgagaaattcccaggaagctttgctaactatcgtggaggtgctgctctac
gatcctctctttgactggactatgaaccctttgaaagcgttatatttgcaacagagacca
gaggatgaggctgacatcaactccacactcaatgccagtgatcaggaagggaacagaaaa
gccagagatgaccagagttttaataaagttgcagaacgtgtcctgatgaggcttcaggag
aagctgaaaggtgtagaggagggaaccgtgctcagtgtgggaggacaggtgaaccttctc
atacagcaggccatggatcccaaaaacctcagtcggctctttccagggtggaaggcctgg
gtatga
DBGET
integrated database retrieval system
