Pelodiscus sinensis (Chinese soft-shelled turtle): 102462599
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Entry
102462599 CDS
T02980
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss04140
Autophagy - animal
pss04142
Lysosome biogenesis
pss04148
Efferocytosis
pss05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
102462599 (VPS11)
04140 Autophagy - animal
102462599 (VPS11)
04148 Efferocytosis
102462599 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102462599 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102462599 (VPS11)
Membrane trafficking [BR:
pss04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
102462599 (VPS11)
Hops complex
102462599 (VPS11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
VPS18_solenoid_2nd
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
TPR_Vps41
zf-rbx1
TPR_GEMI5
Beta-prop_WDR36-Utp21_1st
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Paralemmin
zf-RING_11
zf-ANAPC11
CC_Bre1
zf-C3HC4_3
zf_RING_Vps8_fungal
zf-RING-like
DivIC
DLP_helical
Motif
Other DBs
NCBI-GeneID:
102462599
NCBI-ProteinID:
XP_075765508
Ensembl:
ENSPSIG00000003150
LinkDB
All DBs
Position
26:complement(175549..203821)
Genome browser
AA seq
928 aa
AA seq
DB search
MAAYLQWRRFVFFEREPVTEPGGPEGAGKPFALPPGIAVCDAGRGSLVLGDMEGQIWFLP
RSLQLSCFQAYKLRVTHLYQLKQHSILASIGEDEEGINPLVKVWNLEKRDGGNPLCTRIF
PAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGL
AFRQSGKITHLFVVTTENIQSYMLSGKDYLRLELDTRGCGLRCSTLSDPSQDLQFIVAGN
ECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGSDAQNSDKQILN
VYDLCNKFIAYSSVFDDVVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFKKNLFEM
AINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQR
IHNLTAYLQTLHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKVL
RQAGYYSHAVYLAEKHAHHEWFLKIQLEDIKNYQEALQYIGKLPFDQAESNMKRYGKILM
HHVPNETTELLKILCTDYRPSGDREGSGMLDGKKANSEEFIPVFANNSRELKAFLEHMTE
VQSDSPQGVYDTLLELRLQNWAHEQDPQLKEKLHSEAITLLKSGRFRTVFHKALVLCQMH
NFKDGVLYLYEQGKLFQQIMHYHMQNEQYRKVIEVCELYGDQETCLWEQALSYFARKEED
CKEYITAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIEQDEQRI
QKYREETTRIRQEIEELKTSPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSES
DSECPTCLPENRKVTDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTLI
TDLPPGKSATTIDAGLQRELLIHTKRST
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctacctgcagtggcgccgcttcgtgttcttcgagcgggagccggtgacggag
ccgggcgggccggagggggccgggaagcccttcgccctaccgccgggcatcgccgtgtgc
gacgcgggccggggcagcctggtgctcggggatatggaaggtcagatttggttcttgcca
cgttcccttcagcttagctgtttccaggcttacaagctgagagtgactcacctgtaccag
ctgaagcagcacagcatattggcttctattggtgaggatgaagaaggcattaacccgctg
gttaaagtctggaacttagagaaacgagatggtgggaatcctctttgcacaaggattttc
cctgcaataccgggtaacaaacccacagttgtgtcctgtctaactgtccatgagaatctt
aacttcatggctattggttttgcagatggaagcgttgtgcttacaaaaggagacatcaca
cgagatcgacatagtaagacccagatcttacatgaaggcagttacccagtcactgggctt
gccttccgccagtctggcaaaatcacccacctttttgttgtcaccacggagaacatccag
tcctatatgctatcaggaaaggattatcttcgtctggagctggacacgcgtggttgcggt
ttacgctgctccacgctcagcgacccctcccaggacctccagttcattgtggcaggaaat
gaatgtgtgtatctgtaccagccagatgaacgtggcccctgctttgcctttgagggacag
aaattgatcgttcactggtatcggggatacctcatcattgtttccaaggaccggaaaacc
tctccaaaatcagagtttgctgggagcgacgcacagaactccgacaagcaaatcttgaat
gtctatgatctgtgtaacaagttcatcgcatacagctctgtctttgatgacgtggtggat
gtgttagcagagtgggggtctctctacgtgctgactagagatgggaagatccatgtgctt
caggagaaggatactcagacgaaacttgagatgctgttcaaaaagaacctgtttgaaatg
gctattaacctggccaagagtcaccacttggacagcgatggcttatctgagattttcagg
caatatggagatcatctgtacaacaaagggaaccatgatggagccattcagcagtatatt
cgaaccattgggaagctagagccatcttatgtgatccggaagttcttagatgctcagcgt
atacacaacctgactgcttacctgcagacgctccaccgtcagtccttggccaatgcagac
cacaccaccttgctgctaaactgctacactaaacttaaagacagctccaaactggaggag
ttcatcaagaccagtgagagtgaggtccactttgatgtggagacagcaatcaaggtgctc
cgtcaagcaggttattactcccatgctgtgtacctggcagagaagcatgcacaccatgaa
tggttcctcaaaatacaactggaggacatcaagaattaccaggaagctttgcagtacatt
ggcaagctgccctttgaccaggcagaaagtaacatgaagcgatatggcaaaatcctgatg
caccatgtccccaacgagaccacggaactgctaaagatcctgtgcacagactaccggcca
tcaggagaccgtgagggctctgggatgctagatgggaaaaaggctaattctgaggagttc
attccagtgtttgcaaacaactcccgggagctgaaggcttttctggagcacatgacagag
gtgcagtctgactctccgcagggcgtgtatgacacactgctagaacttcgactccagaac
tgggcacatgaacaagatccacagctcaaagagaagctgcacagcgaagccatcaccctg
ctgaagagtggcaggttcagaacagtcttccataaggctttggtcttgtgtcagatgcac
aacttcaaggatggcgtcctctacctttatgaacagggaaaacttttccaacaaatcatg
cattatcacatgcagaatgagcagtacaggaaggtgattgaggtatgcgagttgtatgga
gaccaagagacctgtctctgggaacaggccctcagctattttgcccggaaagaagaggac
tgcaaggaatacatcacagcagtactgaagcatattgaaaacaagaacctcatgccccca
ctactcgttgtgcagactctggctcataactccaccgccacgctgtctgtgataaaggat
tatcttgtcaacaagctgcagaagcagagccgccagattgagcaggatgagcagaggatt
caaaaatatcgagaagagaccacaaggatccgccaggagattgaagagctcaaaaccagc
ccaaagatcttccagaagaccaagtgcagtatctgtacaagtgccctggagctaccttca
gtccacttcctgtgtggccattcctttcaccagcactgctttgagagctactctgagagt
gattcggaatgtcctacctgcctgccagagaaccgaaaggtgacagatatgatccgagcc
caagaacagaaaagagatctgcacgatcagtttcaacaccagctcaagtgttcgaatgat
ggcttctctgttgttgctgattactttggtcgtggggttttcaacaagctcactctcatc
acagatctgccccctggcaaatcagccacaactattgatgctggcctgcagagggaactc
ctcatacacacgaaacggagcacctag
DBGET
integrated database retrieval system
