Pelodiscus sinensis (Chinese soft-shelled turtle): 102462675
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Entry
102462675 CDS
T02980
Name
(RefSeq) vacuolar protein sorting-associated protein 13B isoform X1
KO
K19526
vacuolar protein sorting-associated protein 13B
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pss04131
]
102462675
Membrane trafficking [BR:
pss04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
102462675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chorein_N
VPS13_ext_chorein
Motif
Other DBs
NCBI-GeneID:
102462675
NCBI-ProteinID:
XP_014429477
Ensembl:
ENSPSIG00000011518
LinkDB
All DBs
Position
Unknown
AA seq
1798 aa
AA seq
DB search
MLESYVTPILMSYVNRYIKNLKPSDLQLSLWGGDVVLSKLELKLDVLEQELKLPFTFLSG
HIHELRIHVPWTKLGSEPVVITINTMECILKLKDGAQEDHESSGSSSTNLSTAEYAKSAV
KQRRVQQTSPSDPDLPPGYVQSLIRRVVNNVNIVINNLILKYVEDDIVLSVNITSAECYT
VDEFWDRAFMDISATDLVLRKVINFSDCTVCLDKRNASGKIEFYQDPLLYKCSFRTRLHF
TYDNLNSKMPSVIKIHTLVESLKLSITDQQLPMFIRIMQLGIALYYGELGNFKEGENENL
VCNTKDILGNISGTEDETVSDMQYSTQCINQEPYMHQDDDQQQGWVSWAWSFVPAIVSYD
DGEDDFTGTECGTILHQQKSQVLKDPIISVGFYCTKATVTFKLTEMQAESSYYSPQKVKS
KEVIRWEQEGTTIEVLMMGEPFFDCQIGFVGCQAMCLKGIMGVKDFEENVNRSDEDAYFF
SCGENLSTKGMTYLTNSLFDYRSPENNGIRAEFILDAAHHKETYSEIAGMQRFGAFYMDY
LYTMESTCGKVSGNQQDLSSAKSEDFVNMQEMSTKSLIVGPLYLRLDSSAGHRIMKMIAC
AVEHEYEPYNKPKADIVEGNKTTPNSEEKTSLEEYVPTRLTSFTILKCTITVSMAEFNLL
GHLLPIIMGQKSSCGLLNAISFQPLRPLPAIRILVDKINLEHSVPMYAEQLVQTVSSLSQ
PSDNLLHYCYAHCYLKIFGFQAGLTSLDIRGSYCLPASIIPSFSTAVYGKLLKFPKYWTK
RSHVPQTECIFELPNLTVQATRAQTLLLQTIYQSWFHHVGNISSAVVNEVLLNEVFQTLG
VKSKNPLPTLEGSVQNVELKYCSTSLVKCASGTVGSIKICAKAPGDGGKEKLIPLVQGPS
DTRDLHSSKWLNESRKPESLLAPDLVAFTIQSPQYMDYCHNSGAVLLASVQGLAVNIDPV
LYTWLLYQPQKRSSRHIQQQPVGAVSLGIPVTRKKEDEVSVGSMPLAKQQSNQASEYASS
PVKTKTVTESRPLSLPLKAMLTSSETSRNPEERMKECIGTVWNAVKCLTLQLEVQSCCVF
VPNDSLPSPSTIVSGDIPGTVRSWYHGQAGMPGTVVLCLPQIKIMSAGHKYMEPLQEIPF
VVLRSILEEGDAFPWTISLHHFSVYTLLGQQMTLNLVEPMGCTSTLAVTSQKLVASGPES
RHSFVVCLHVDLESLEIKCSNPQVQLLYELADTMSKVWNKIQKKGMLYQSSVYTESITGP
APPTSPIKSSVGTAPPDTSTYSPSGDFGTTTEADSVQGGDDSPFSDSVTLEQTTSNIGVS
SGRVSLWMQWMLPKITVKLFAPDPGSKGTEICVVSELEDLSASVDMQDVYTKVKCKIESF
NIDHYRNSLGEDCWSLGQYGGVFLSCTDKLNRRTLLVRPVSKQDPFSNFSGFFPPTTAKL
LEGSHQQHGFLSLTYTKAVTKNVRHKLISRNERRTFYKLSEGLNDGSPHFLHEILLSAQA
FDVVLCFPLLNAIASIFQASLPKNQKEKSKSPGQPMRTHTLTSRNLPLIYINTGVMRVFF
PKTEEMQHDTGVEANQAIKEDTLILKIGSVSMAPQADNPLSRAILRKDIYQRALNLGILR
DPGSEVEDRQYQIDLQSINIGTAQWDQLKPEKDSSKGGVLTENERNSQNPALEWNMASSI
RRHQERRAILTPILTDFTVRITAAPAIIFTKIISPENLHTEDILVCGHSLEVNMTTNLDF
FLSVAQVRLLQQLVQANLIGLEPSDKVTEVGYITCFLLALLWLTSDIYVVWWKKKTCK
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgctagagtcctatgtgactcccattttaatgagttatgtgaatcgctatattaagaac
ttgaaaccctcagatctgcagctgtctctatggggaggagatgtggttcttagcaaactt
gaattaaagctggatgtacttgaacaggagctgaaactaccatttacttttttaagtgga
catattcatgaattacgaatccatgtaccatggacaaaattaggctcagaaccagttgtc
atcactatcaatacaatggagtgcatcttgaaactgaaggatggagcccaggaagaccat
gaaagcagtggttccagttcaacgaacctcagtactgcagagtatgcaaaatcagcagta
aaacaacgaagagtccagcaaacttctccttctgatcctgatttacctccaggttacgtg
cagagtttgattaggcgtgtagtaaacaatgtcaacattgtgatcaataacctcatatta
aaatatgtggaagatgatattgttctctcagtcaatatcacttctgcggaatgctacact
gtcgatgaattttgggatcgtgcatttatggacatctctgcaactgatctagtactaagg
aaggtgattaatttttctgactgtacggtatgtcttgataagagaaatgccagtggtaaa
attgaattttaccaggaccctcttctttacaagtgctccttcagaactcgtctgcatttt
acttatgataaccttaattccaagatgccgtctgttatcaaaattcatacattggttgaa
agtttgaagctttccatcactgatcagcagctccctatgtttatacgcataatgcagctt
ggaattgctctttactatggagaactgggaaactttaaagaaggagaaaatgaaaacctg
gtttgtaatactaaagatatattgggaaacatctcaggtacagaagatgaaacagtttca
gatatgcaatattctacccagtgtattaaccaagaaccctacatgcatcaagatgatgat
cagcagcagggatgggtttcctgggcctggtcttttgttcctgctattgtgagttatgat
gatggagaggatgacttcactggaacagaatgtggaactatactgcatcagcagaaatcc
caggtccttaaggatcctattatttctgttgggttttactgcacaaaggcaactgtgaca
ttcaagcttactgaaatgcaagctgaaagtagttattatagccctcagaaagtaaaatcc
aaagaagttatacgttgggagcaagaaggaaccacaattgaggtgcttatgatgggggaa
ccgttttttgactgccaaataggttttgttggttgccaagcaatgtgccttaaaggaata
atgggggttaaagactttgaagagaatgtgaacagaagtgatgaagatgcctacttcttc
agttgtggagaaaatctgagtacaaaaggcatgacgtaccttaccaattcactatttgat
tatagaagtccagaaaataatggtattcgtgcggaatttattttggatgcagctcatcat
aaggagacatactcagagatagctggaatgcagaggtttggtgccttttacatggattac
ttgtacacaatggaaagcacctgtggcaaagtttctggaaatcagcaagacctttcttca
gcaaagagtgaagattttgtaaatatgcaggagatgtctacaaaaagcctaattgtaggt
ccactttatcttcgattggatagcagtgcaggacacaggattatgaaaatgatagcttgt
gctgtggaacatgaatatgagccatataacaagcccaaagcagatattgtggaaggaaat
aaaactacaccaaactcagaagaaaaaacatctttggaggaatacgttccaactcgactt
acaagttttaccattcttaagtgcaccattaccgtctctatggctgaattcaatttactg
ggccatttgctccctataataatgggacagaagagttcatgtggtttgttaaacgctata
agcttccagcctttaaggcctttgcctgctattagaatattggtggacaaaattaacctg
gaacattctgtgccaatgtacgctgaacaacttgtgcaaacggtcagcagccttagccag
ccttctgataacctgcttcattactgttatgcacactgctaccttaagatatttggtttt
caggcaggactgacttctttggacattagaggatcatactgtttacctgcttcaattatc
ccctctttcagtactgctgtttatggcaaactgcttaaatttcccaaatattggaccaag
cgatctcatgttccacaaacagaatgcatatttgaacttccaaatctgacagttcaagca
actagagcccagacgcttctgctacaaaccatttatcagagctggtttcatcatgttgga
aatatcagttctgctgtggtaaatgaagttttgctgaatgaagtcttccaaacattaggt
gtgaaatctaagaatcccctgccaactcttgagggctcagtccagaatgttgaattgaag
tactgcagcacatcattggtcaaatgtgcctctgggaccgtgggatcaataaaaatttgc
gccaaagccccaggtgatggtggaaaagagaagctgattcctttagttcaaggcccttct
gacaccagagacctacacagcagcaaatggctcaatgaaagtagaaagccagaatctctc
ttagctccagatttggtagcttttacaatccagagtccacagtatatggattactgccat
aattctggtgctgtacttttggccagtgtgcagggattagcagtcaatattgatccagtc
ttatatacttggcttctgtaccaacctcagaaacgaagtagtagacacatccaacagcag
cctgtaggagctgtttctcttggcattccagtaacaagaaaaaaagaggatgaggtatca
gttggaagcatgcctttggcaaagcagcagtcaaatcaagcttctgagtatgccagcagc
cctgttaaaacaaaaactgtaacagaatctaggcctctgtcgcttccactgaaagccatg
ttgacctcatctgaaaccagcagaaatcctgaagagagaatgaaagaatgtattgggaca
gtctggaatgctgttaaatgccttacacttcagcttgaagtgcagtcatgttgtgtgttt
gttccaaacgatagcctcccttccccaagtacaattgtgtccggtgacattcctggaact
gtccgaagttggtaccatggacaagctggtatgcctggtacagttgttctttgcttgccc
cagataaaaattatgagtgctggacacaaatacatggaaccactacaagaaatccctttt
gttgtgctaagatcaattctcgaagaaggtgatgccttcccttggacaatcagtctacat
catttcagtgtgtatactcttcttggacaacaaatgacacttaatttagtagaacccatg
ggctgtacttctactctagctgtcacttcacaaaaactagttgcctcagggccagaatcc
agacactcgtttgttgtctgcctccacgtcgaccttgagtcactagaaataaaatgctcg
aacccccaggtacagcttctgtatgaactggctgataccatgagcaaagtgtggaataag
attcagaaaaaagggatgctgtatcagtcttctgtctacacagaatccattacagggcct
gctcctcctacctctccaattaaaagtagtgttgggacagctccaccagataccagtaca
tatagcccatctggtgactttggaaccactacagaggctgattctgtacaaggtggtgat
gattcaccattctcagactctgttaccttggagcaaacaacaagtaacattggagtatca
agtggacgtgtcagtttgtggatgcagtggatgttgccaaaaattactgtaaaactattt
gcaccagatcctggaagcaaaggcacagagatttgtgttgtcagtgaattagaagatctc
agcgcctcagtagatatgcaagatgtatacaccaaagttaaatgtaaaatagaaagcttc
aacattgaccactacagaaacagccttggggaagactgttggtctctggggcaatatgga
ggtgtattcctttcctgtactgacaagctgaacagacgtaccttgttggttcgacccgtc
agcaagcaggaccctttcagtaatttctctggcttctttcctcctacaactgcaaaactt
ttagaagggtcacaccaacaacatggatttctctctctcacttatacaaaggctgtgaca
aaaaatgtccggcacaagttgatatcaagaaatgaacgaagaactttctataagctatct
gaaggtcttaatgatggttctcctcattttcttcatgagatccttctttctgctcaggca
tttgatgttgtcctatgttttcctttgcttaatgcaattgcaagtatatttcaagcaagt
ctgccaaagaatcaaaaagagaaaagcaaatcacctggccaacccatgaggactcatact
ctaacatctcggaacttgcctctgatttatatcaacacaggtgtaatgagagtcttcttt
cccaaaactgaggaaatgcaacatgatacaggagttgaagctaatcaggcaataaaagaa
gacactttgattctcaagattgggtctgtctcaatggctccccaggctgacaaccctctt
agcagagctatactcagaaaagatatttaccagagagcacttaatctgggaatacttcgg
gaccccggatcagaggttgaagacagacaataccaaatagatcttcagtctatcaacatt
ggtactgcgcagtgggatcaattgaaacctgaaaaggacagtagtaaaggaggtgtgctg
acagagaatgaaagaaattctcaaaacccagcgcttgagtggaatatggctagtagcata
aggaggcatcaggaacggagagcaattttaactccaattttaacagatttcacagtgcga
ataactgcagctcctgcaatcattttcacaaaaataatttcacccgaaaacttgcacaca
gaggatattttagtgtgcggacattctttggaggtgaatatgaccacaaacctggacttc
ttcctcagcgtagctcaagtacgacttctacagcagctagtacaagccaatttgattgga
ctagagccttctgacaaggtcactgaggtaggttatataacctgttttcttttagcatta
ctctggctcacatcagacatttatgttgtttggtggaagaaaaaaacgtgtaagtaa
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integrated database retrieval system
