Pelodiscus sinensis (Chinese soft-shelled turtle): 102462924
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Entry
102462924 CDS
T02980
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102462924 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102462924 (BARD1)
04121 Ubiquitin system [BR:
pss04121
]
102462924 (BARD1)
03036 Chromosome and associated proteins [BR:
pss03036
]
102462924 (BARD1)
03400 DNA repair and recombination proteins [BR:
pss03400
]
102462924 (BARD1)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
102462924 (BARD1)
Ubiquitin system [BR:
pss04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
102462924 (BARD1)
Chromosome and associated proteins [BR:
pss03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
102462924 (BARD1)
DNA repair and recombination proteins [BR:
pss03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
102462924 (BARD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
NIBRIN_BRCT_II
ANK_LRRK2
zf-RING_UBOX
zf-RING_10
zf-rbx1
Siva
Motif
Other DBs
NCBI-GeneID:
102462924
NCBI-ProteinID:
XP_075790066
Ensembl:
ENSPSIG00000015299
LinkDB
All DBs
Position
7:complement(60650318..60809670)
Genome browser
AA seq
791 aa
AA seq
DB search
MWAALRARSGNRPAGGAGPAPLGMELPAGGWHRTRAALRQLEGRLLCSRCIKILKEPVSL
GKCEHVFCLSCVGDCIGAECPVCHTPAWVQDVQINRQLDNMIQLCSKLRHFLGKDSSDSA
DDLFTSVVPDHESRSKKRQIKMWLSPRSRKIRCVLNNSSSQKQNQLVIDDSSQQGPSSTY
DFFPSPQEKSSKMTMPPPHRSRKKRKKKILADFNQVWGIEKTKQQEGSGTEGETQNAPKG
KTVTFCSQSLVLGSPEPKHMEETIGQEFVTEISHKNGRESPLERAMQVKPAEDIDSVKVT
CSVQVNGINTEKSLPSENEITSLKRGRQQQSTSSALAHSKRLRRSGQNADMHSLSQGGGS
PEVTEPGTPVHISPRAHKRNGGALSKTRCSAVQQINSPSLSKTPSSPFTSNTPHQMETTP
SPSLLKKSPGGNTVTKRNHRGETVLHVASIKGDVSAVEDLLKNGADPNVKDHAGWTPLHE
ACNHGHKKVVDLLLQHRALVNTTGYQNDSPLHDAAKNGHVNIVELLLLHGASRDAVNIFG
LRPVDYAETEKMKSVLMLPMKNESYSFSQCSELASPGHTREGPVVLLGSGLTSEQQKSLS
KLAAALKAKKCVAFNSTVTHVVIPNDPVRSTSKCMLAILAGCWVLKFAWVEACLQSRIRE
QEEKYEVGGGPQRGRLNQEQLLPKLFDGCYFYFLGTFNHHQKNDLIELVKAAGGQILLRQ
PKPDSDVTQTISTVAYHAEPGSDQCFCTQYIIYDVSSKYNPEKIRQGKVWMAPSSWLIDC
VMSFQLLPVAK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccgcgctgcgggctcgctccggcaaccggccggcggggggggccggccccgcg
cccctcggcatggagctgccggccggcggctggcaccgcacccgggccgctctgcggcag
ctggaggggcggctgctctgctctcgctgcattaagatcctcaaggaacctgtgtcctta
ggaaaatgtgagcatgtcttctgtctatcttgcgtgggtgactgtattggtgcagaatgt
ccagtgtgtcacactccagcctgggtccaagatgtgcaaatcaacaggcagctagacaac
atgatccagctgtgcagcaaactgagacatttcctgggcaaggactcctcagattctgca
gatgacttgttcacatcagtagttcctgatcatgaatcaagaagcaagaagaggcagata
aaaatgtggctcagcccacgcagcaggaagatcagatgtgtcctaaacaatagttcctct
cagaagcagaatcaactggtgattgatgatagttctcaacagggcccatcgtctacatat
gacttctttccttctcctcaagagaaatcttccaagatgaccatgccaccccctcacaga
tcaaggaaaaagcggaagaaaaaaattctagcagacttcaaccaagtgtggggcatagag
aagacaaagcagcaagagggcagtggaactgaaggggagacccaaaatgcacctaaagga
aagactgtgaccttttgcagccaatcattagttttaggcagtccagagccaaagcatatg
gaggagacaatcgggcaggagtttgtaacagaaatcagccataagaatggaagagagtcc
cccttggaaagggctatgcaagtaaaacctgcagaggatatagatagtgttaaggtcacc
tgttctgtacaagtgaatggtattaatacagagaaatctctgccatcagaaaatgaaatt
acttcgttaaaacgtggaaggcagcagcagtctacatcctccgctttagctcattctaaa
agacttagaagaagtggtcagaatgctgatatgcactcactcagccagggtggtggcagt
cctgaggtaactgaacctggaactcctgttcatatctcccctcgtgcacataaacgtaat
ggtggcgcattatcaaagacaagatgctctgcagttcaacaaataaatagcccttcactt
tcaaaaactccctctagcccattcacttcaaatactccccatcagatggaaacgacaccc
agcccttcccttttgaagaagtctcctggtgggaacacagttaccaaaaggaatcacaga
ggagaaaccgtgcttcatgttgcttccatcaagggtgatgtatcagctgttgaagattta
ctgaaaaatggagctgaccccaatgttaaagaccatgctggatggacgccattgcacgag
gcttgtaatcatgggcacaagaaggtggtggacctgttgctacagcacagggctttggtg
aacactacgggctatcagaatgactcaccacttcatgatgctgccaagaatggacacgtg
aacattgttgagctgttgcttttacatggagcctcccgggatgcagttaatatattcggt
ctgcgccctgtggactacgcagaaactgaaaagatgaagtctgtgctaatgctaccgatg
aagaatgaatcgtattcatttagtcagtgctcagaactagcaagcccaggccacaccaga
gaagggcctgttgttctgctgggaagtggcctcacttcagaacaacaaaaatcactgagc
aaactcgcagcggcgctgaaggctaaaaaatgtgtcgcgtttaacagcacagtgactcac
gtcgttatccctaatgatccagtacgaagtactagcaaatgcatgctggccattctggcg
ggatgttgggtcctgaaatttgcgtgggtggaggcatgtttgcaaagcagaattcgtgaa
caggaggagaagtatgaagtcggtggtggtccacaaagaggcagactcaaccaagagcag
ctgctgcctaagttgtttgatggttgctacttctattttttgggaactttcaatcaccac
cagaagaatgacctcattgagctggttaaagcggcaggaggacaaatcctcctgagacag
ccaaagccagatagcgacgtgacacagaccatcagcacggtggcgtaccatgctgagcct
ggctctgatcagtgtttctgcacacaatacattatctatgatgtgtcttctaaatacaac
ccagagaaaattcgccaaggcaaagtctggatggccccctccagctggctcatagactgt
gtcatgtcatttcaactgttacctgttgcaaagtga
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integrated database retrieval system
