Pelodiscus sinensis (Chinese soft-shelled turtle): 102462939
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Entry
102462939 CDS
T02980
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03013
Nucleocytoplasmic transport
pss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102462939 (SRRM1)
03015 mRNA surveillance pathway
102462939 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pss03019
]
102462939 (SRRM1)
03041 Spliceosome [BR:
pss03041
]
102462939 (SRRM1)
Messenger RNA biogenesis [BR:
pss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102462939 (SRRM1)
Spliceosome [BR:
pss03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
102462939 (SRRM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
102462939
NCBI-ProteinID:
XP_075765088
Ensembl:
ENSPSIG00000013119
LinkDB
All DBs
Position
25:751960..784108
Genome browser
AA seq
910 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEDKDSREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPRHRTKSRSVTPAPEKKEETPEPEPSVQTKETLIQEATSTS
DILKVPKTEPLPDTKETSPERNTKKERDKEKEKTRQRSPSRSKSKSRSRSHSPSHSRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKLPKRIVSSPPRKTRKLSPSASPPRRRHRPSPPTSPPPKPRRSPTPQQ
PSRGRKVRGSVSPGRASAPKHKSIEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQ
RRQYRRQNQQSSSDSGSSSSSEDERPKRSNVKNGEVGRRRRHSHSPSPSPRKRQKDSSPR
MQMGKRWQSPMIKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRHSP
TPRRYSPPIQRRYSPSPPPKRRTATPPPKRRASPSPQPKRRVSHSPPPKQRSSPVTKRRS
PSLPSKHRKGSPSSRSNRETRSPLQSKRHSPSPRPRASHTSASPPPLRRGASSSPQRRQS
PSPSTRPIRRVSRTPEPKKTKASTPSPQSVRRVSSSRSASGSPEPAPKKHQAPSSPTQSH
SPSTNWSPPHVKKESPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKA
AAAAAAAAVAAAATSSAQEDPEAETEPKKACSVQSSTWLCSCSEWRAAAWKAGSLSEKPA
ELLARSHPGD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggcttcttccgcggaacaagtgcggagcaggacaatcgcttcagcaacaaa
cagaagaagctgttgaagcagctgaaatttgcagaatgtctagaaaagaaagtggacatg
agcaaagtaaacttggaagtaataaagccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggatttttgaatgggaaaaatgctagagag
ttcatgggtgaattgtggccattgctgttaagtgcacaagaaaacattgctggtattcct
tctgctttcctggagctgaagaaagaagaaataaaacaaagacagattgagcaagagaag
ttggcttctatgaaaaaacaagatgaagacaaagacaagcgggacaaggaggacaaagac
agcagagaaaaaagggacagatccagaagtccaagaagacgcaaatcaaggtctccttct
cctagaaggagatcatccccagtcagaagagagagaaagcgtagccattctcgatctcct
cgtcacagaaccaagagccgtagtgttactcctgcaccagaaaagaaagaggagactcca
gaaccagagccttcagtgcaaacaaaggaaactttgattcaagaggcaacatcaactagt
gatatcctgaaagttcccaaaactgaacctctaccagatactaaagaaacttccccagaa
cgaaatacaaagaaagagagagataaagaaaaagagaagactcgtcaaagatctccatcc
cgttccaagtcaaagtcacggtctcgctcacattccccttctcattctagaccaagaagg
cgtcatagatcacgatcaaggtcttactcccctagaaggcgaccaagcccaaggcgacgg
ccatccccgaggaggaggagtcctccaaggcgcatgcctcctccacccagacacagaaga
agtagatcccctgtgaggcggagaagacggtcatcagcatctttatctggaagcagctct
tcttcttcttcttcacgctctcgatcaccgccaaaaaaactacccaaaagaattgtatcc
agtcctcctcgtaaaacacgtaaactgtctccttcggcaagccctccgaggcgaaggcac
aggccttccccaccaacaagtccacctccaaaaccacgcagatctcccacacctcagcag
ccaagtcgtggaaggaaagtccgtggctctgtttctcctggcagagcttcagcacctaaa
cataagagtattgaaaaaagggagtctccctcaccagcaccaaaacctagaaaagtagaa
ttatcagaatcagaagaagacaaaggtggcaaaatggctgcagcagattctgtacaacag
agacgtcaatacagaaggcaaaaccagcagtcttcatctgattctggttcatcatcttcc
tctgaagacgaacgaccaaaaagatcgaacgtgaagaatggtgaagtgggtaggcgcaga
cgacactcgcatagtccatcaccttctccacggaaacggcaaaaggattcttcccctcgg
atgcagatgggaaagaggtggcaatcgccaatgattaaaagtaggaggaggaggagtcca
tcacccccacctgccagaagacgacgttctccttctcctgcccctcctccaaggcggcgc
agatcgccttcattgcctcgccgaaggtctccatcaccaccaccacgcaggcactcgcca
actcccagaagatattctcctccaatacagagacgatattctccttccccaccgcctaag
cgaagaacagctactccccctccaaaacgaagggcatcaccttcgccacagcccaagcgc
agagtctctcattctccaccaccaaaacagagaagttctccagtcacaaagagacgttcc
ccatcgctgccttccaagcataggaaaggttctccttccagcaggtctaatcgtgaaacc
cgctccccactacagagtaaacggcattcaccttctccacggcctagagcttctcatacc
tccgcgagtcctccaccactgcgaaggggagcttcatcctcgccccagaggagacagtct
ccatctccaagcactagacctatccggagagtgtcaaggaccccagaacccaaaaagaca
aaggcttccacaccaagtccgcagtctgtgagaagggtgtcttcatccaggtctgcgtca
ggatcgcctgagccagcacctaagaaacatcaagctccttcttcccctactcaatctcat
tccccttccactaactggtcgccaccacatgtgaaaaaggagagtcccacacagagtcca
tctcctgcacggaattctgaccaggaaggtggtgggaagaaaaagaagaaaaagaaggat
aagaagcataaaaaggataagaagcacaagaaacataaaaaacataagaaagagaaggct
gcggctgctgcggcagctgctgctgtggctgcagccgctacgtcatcagcccaagaagac
ccagaagcagagacggagcccaaaaaggcttgcagtgttcagagcagcacatggctctgc
agctgctctgagtggcgtgcagcggcatggaaggcagggagcttgtctgagaaacctgct
gagctgctggccaggagtcacccaggagactga
DBGET
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