Pelodiscus sinensis (Chinese soft-shelled turtle): 102463723
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Entry
102463723 CDS
T02980
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X2
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pss
Pelodiscus sinensis (Chinese soft-shelled turtle)
Pathway
pss03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pss00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102463723 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pss03041
]
102463723 (PRPF4)
Spliceosome [BR:
pss03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
102463723 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD_LRWD1
WD40_like
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
102463723
NCBI-ProteinID:
XP_006117421
Ensembl:
ENSPSIG00000010713
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MPEGTKNKLSEDSDAPLPKRSHIFYGSLEEKERERLAKGESGLLGRERVRAAIEAGNINI
TSGEVFDLEDHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPA
ERRERLRNILSVVGTDALKKTRKDDDKSKKSKDEYQQTWYHEGPNSLKTARLWIANYSLP
RATKRLEEARLYKEIPEATRTSQKQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKLLA
TACWSGLCKLWSVPDCNLAHTLRGHNTNVGAIVFHPQATISLDKKDVNLASCAADGSVKL
WSLESDEPVADIEGHTMRVSRVMWHPSGRFLGTTCYDHSWRLWDLQAQEEILHQEGHSKG
VYDIAFHSDGSLAGTGGMDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSG
DNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPSHGNFLLTGAYDNTAKIWTHPGWSPLKT
LAGHEGKVMGLDISCDGQLIATCSYDRTFKLWMAE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgccagagggaacaaaaaacaaactgtcggaggacagcgatgctccactacccaagaga
tcccatatcttctatggcagtttggaggagaaggagagggagcgtcttgccaaaggagag
tcaggactgctggggagagagagagtgagagctgcaattgaggcaggcaatattaacata
accagtggtgaggtctttgatcttgaagaccacataagtgagcgtcaggcagaagttttg
gctgaatttgagcgcaggaagcgtgccaggcagatcaatgtttccaccgatgactctgaa
gtcaaggcgtgcctacgagctcttggagagcccatcacgctctttggagaggggcctgca
gaacgcagagaaaggttgagaaatattctctcagtggttggcacagatgcattaaaaaag
accaggaaagatgatgacaaatcaaagaaatctaaagacgagtatcagcaaacgtggtac
catgaagggcccaacagcctgaaaacggctagattgtggatcgccaactattcactcccc
agggcaacgaagaggctggaagaagcccgtctgtacaaagagattccagaggcgaccagg
acatcccagaagcaagaactgcacaaatccctcaggtccttgaataatttctgcagtcag
attggagacgaccgcccaatatcttactgccatttcagtcccaattccaaactcctggct
acagcctgctggagtggcctgtgcaagctgtggtctgtgcctgactgcaatcttgctcat
actttgcgagggcacaacaccaacgtaggagcaatagtcttccatccccaagctaccatc
tccctggacaagaaggacgtcaacctggcctcttgtgcagctgatggctctgtcaaactg
tggagcctagaaagcgacgagccggtggcagatatcgaaggccacaccatgagagtgtca
cgagtgatgtggcatccctcggggaggttccttgggaccacctgctacgatcactcctgg
cgcttgtgggacctgcaagctcaagaggagattctccatcaggaggggcacagcaagggg
gtctacgacatcgccttccacagtgatggctctcttgctgggactgggggcatggatgcc
tttggcagggtgtgggatctgcgcaccgggcgctgcatcatgttcctggagggccatctg
aaggagatctacgggatcaacttctcccccaatggataccacatagccacgggcagcggg
gacaacacgtgcaaggtgtgggacctccgccagaggaggtgtgtctacaccatccctgcc
caccagaacctggtgactggagtgaagtttgaaccctcacacggcaacttcctgctcacc
ggcgcttatgacaacacagccaagatctggactcacccaggctggtcccctctgaagacg
ctggctgggcacgagggaaaagtaatgggactggacatctcctgcgatgggcagctaata
gcgacatgctcatatgacaggaccttcaagctgtggatggcggagtag
DBGET
integrated database retrieval system
