Pseudoalteromonas sp. SD03: ABZP26_00480
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Entry
ABZP26_00480 CDS
T11365
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
pssd Pseudoalteromonas sp. SD03
Brite
KEGG Orthology (KO) [BR:
pssd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pssd03036
]
ABZP26_00480
Chromosome and associated proteins [BR:
pssd03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ABZP26_00480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
MrpR_C_cat
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
XDH87700
LinkDB
All DBs
Position
1:complement(93878..94822)
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AA seq
314 aa
AA seq
DB search
MSDDTPNISDLSDSWRTPITLFSDYLKFERQYSAHTVNQYVSQLGFAALYFNKLCDNWFA
VQSEHIRRYSMALRAKQLSGRTISLKLSCIRSLYKFLKAKNITEQPHYHNPAQGIKGPKF
AKPLPKNLDVDQMARLLEIPDDDPLAIRDKAMMELMYSSGLRISELVGANMQDINARNGE
ILVRGKGAKERLIPVGSKALEALKKWLAVRPLFMGADEHAVFLSSKKNRISVRQVRLRMQ
EWGIKQGISSQVHPHKLRHSFASHILESSGDLRAVQELLGHSSLSATQVYTHLDFQHLAK
VYDNTHPRAKKRTD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacacgccaaatattagcgatttaagcgatagctggcgtacacccattaca
ttatttagtgattacttaaaatttgaacgccagtattcagcgcacaccgtcaatcaatat
gttagccaattaggttttgccgccttgtattttaataagctatgcgacaattggtttgcc
gtacaaagtgagcacattcgccgttacagcatggcgctgcgcgctaagcaactgagcggc
agaacaatcagcttaaagctaagctgcattcgaagtttatataagtttttaaaagcaaaa
aatattactgagcaaccgcattaccataaccccgcgcaagggataaaaggccctaaattt
gccaagcctttacctaaaaatcttgatgttgaccaaatggcacgtttactcgaaatcccc
gatgacgatccacttgccattcgagataaagccatgatggaactcatgtattcatcaggt
ctgcgcattagcgagttagttggtgctaacatgcaggatataaacgcccgtaatggtgaa
atactggtacgtggtaaaggtgcaaaagaacggctaataccggttggctctaaggccctt
gaggcattaaagaaatggctcgcggttcggccgctatttatgggcgcagacgaacacgcg
gtatttttaagtagtaaaaaaaaccgtatctctgtgcgccaagtccgcttgcgaatgcaa
gaatggggcattaaacaaggtataagctcacaagtgcatccgcataaattacgccactca
tttgcgtcgcatattttagaatcgtctggcgatttacgagcagtacaggagctattaggc
cacagtagtttatctgcaacccaagtttatactcatttagattttcagcacttggctaag
gtgtacgacaacacccatccacgtgctaaaaaacgaaccgattag
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