Pseudoalteromonas sp. SD03: ABZP26_05475
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Entry
ABZP26_05475 CDS
T11365
Name
(GenBank) DEAD/DEAH box helicase
Organism
pssd Pseudoalteromonas sp. SD03
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
P-loop_SecA
CMS1
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XDH88645
UniProt:
A0AB39ATL1
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Position
1:complement(1182199..1184031)
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AA seq
610 aa
AA seq
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MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIPLLLERKDVLGLAQTGTGKTAAFA
LPLLNNIDPSVKQPQILVLTPTRELAIQVAEAFEQYAKHTRGVEVLALYGGQSYSIQLSA
LRRGAQIIVATPGRLIDHINRGTIKFDALQALVLDEADEMLRMGFIDDVESIMEKTPREK
QTCLFSATMPKQIQNISSKYMNNPEQVHISARNSTVSSVEQVFWNAHVHKNKAIVRFLEA
EQYEGAIVFVRTRNDTVQLAELLEREGFSAAPLNGDMNQQARERTVDRLKSGMLNVVIAT
DVAARGLDVDRLSLVINYDIPQDSEAYVHRIGRTGRAGRTGKAILFVKHNERYLLKNIIR
HTKSEIAQVELPTAKVVEEKRINALQEKLTLALENKDITFFNEVAANMAQKLELAPEDLA
GALLCLAQQQSPIKVEEVKIQPRERNERNDRNPRSNDRGRRNERPERGGERAERKPRERN
SRDAGPMDTYRIEVGREHGVQVKNIVGAIANEADISSKFIGDIRLHDSHSTVQLPQNMPK
DVLDHFQKVFICKRPMGMTLTQDQGPSEPRGERSERPAGDKKRSFNKDGQRPDKRSGPRK
ERRPVSFTAK
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaccagtcacgtttgaatctctaaatctttctcctgcaattttaaaggcagtt
gaagagttgggttacaagacaccatctgaaatccaagctcaatgtataccgttattgcta
gaaagaaaggacgtactgggactagcacaaacgggtacaggtaaaacagcagcatttgca
ctgccattactaaataatattgacccgtctgtgaaacagccacagatccttgtactcaca
cctacccgtgagcttgcgatccaagtagctgaggcatttgaacaatatgcaaaacacact
cgtggtgttgaagtattggcactatatggtggccagagctacagcatccagctgagcgca
cttcgtcgtggcgcacagattatcgttgctacaccaggtcgattaatcgatcacataaac
cgtggcactatcaagtttgatgctttacaagcacttgtacttgatgaagccgatgaaatg
ctacgtatgggctttatcgatgatgtagaaagcatcatggaaaaaacaccgcgtgaaaag
caaacatgtcttttctctgcgactatgcctaagcaaattcaaaacatcagcagcaaatat
atgaataaccctgaacaggttcatatttctgcgcgcaactcaactgtatcatcagttgaa
caagtgttttggaatgcccatgttcataaaaataaagcgattgttcgtttcttagaagct
gaacaatatgaaggtgctattgttttcgtacgtacgcgtaacgacacagtgcaacttgct
gaattattagagcgcgaaggtttctctgcggcgccacttaacggtgacatgaaccagcaa
gcgcgtgagcgcacggttgatcgtttaaaaagcggcatgctaaacgttgttattgcaaca
gacgtagcggcacgtggtcttgatgtagaccgtttaagcttagttatcaactacgacatt
ccacaagattctgaagcctacgttcaccgtatcggccgtacaggtcgtgctggtcgtact
ggtaaagcgattcttttcgttaagcataacgagcgttatttacttaaaaatatcattcgt
catactaaatctgaaatcgcacaagttgaattacctacagctaaagttgttgaagaaaaa
cgtatcaatgcattacaagaaaagcttacgcttgctcttgaaaacaaagatattactttc
ttcaatgaagtggctgccaacatggcacaaaaacttgagctggctcctgaagacttagcg
ggtgcattactgtgtttagcacagcaacaatcaccaattaaagttgaagaagttaagatt
caaccgcgtgagcgtaacgaacgtaatgatcgtaatcctcgtagcaatgaccgtggtcgt
cgtaacgaacgccctgaacgtggtggtgagcgcgctgagcgtaaaccacgcgagcgtaac
agtcgtgatgcaggtcctatggatacataccgtatcgaagtaggtcgtgagcatggtgtt
caggttaagaacattgttggcgcaattgctaacgaagcagacatttcaagcaagtttatt
ggtgacattcgtcttcacgacagtcacagtacggtacaattaccgcaaaacatgcctaaa
gatgtacttgatcacttccaaaaagtgtttatttgtaaacgcccaatgggtatgacatta
acacaagatcaaggcccttctgagccacgcggcgagcgttctgaacgccctgctggtgac
aagaagcgtagctttaataaagatggtcaacgccctgataagcgtagcggccctcgtaaa
gaacgtcgcccagttagctttaccgctaagtaa
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