Pseudoalteromonas sp. SD03: ABZP26_06800
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Entry
ABZP26_06800 CDS
T11365
Symbol
rne
Name
(GenBank) ribonuclease E
Organism
pssd Pseudoalteromonas sp. SD03
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Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Cementoin
DUF7351
Motif
Other DBs
NCBI-ProteinID:
XDH88878
UniProt:
A0AB39ATL2
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Position
1:complement(1454740..1457919)
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AA seq
1059 aa
AA seq
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MKRMLINATQQEEMRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GADRHGFLPLKEIARTYFPQGYTFHGRPNIRDVIKEGQEVIVQVDKEERGQKGAALTTFI
SVAGSYLVLMPNNPRAGGISRRIEGDERTELKESLSRLELPKGMGLIVRTAGVGKSFEEL
NYDLKALLVHWEAIQQAADSAKAPFLIHQESNVIFRAIRDYLRRDIGEILIDKPRVFEEA
KAHIERFRPDFMSRVKLYQGDTPLFTHYQIESQIESAFQREVRLPSGGSIVIDPTEALTS
IDINSSKATKGGDIEETALNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPPRHQREVEN
RLKDAARPDRARVQIGKISRFGLLEMSRQRLRPSLGEASQGVCPRCSGQGTIRSNESIAL
SILRLIEEEAIKDNTAQVNAQVPVAVAAYLLNEQRRSVHRIEKHHKCDVVIIPNQHMETP
HYEVMRLRKDETLETVSYEQVVAPEPEAFEMSKSPAAPVREEPKLKGVVMPSTPAPQAAA
KAAPVVEAKAEIGLFAALGKWIKSLFGSDTEQKSEKQTEKQSQDRPSNNRGNDNRRRNNN
QRRRNNNPRNKPRNERTADTEAKNESAPVNDTQEKNENRNKRRRNSNTRKRPEHKTEDKT
QVKAEATQNTDTAVKSDKNAEPKEQKPKVRRQRRNLRKKVRVQDESTEQVQTTEQAVEQP
VVKEDKPQVKEQAPVVEKQAPVSDEKAPAPAKKQAEAVVDANDNVATQDEEQEQTRTRSR
RSPRHLRASGQRRRRPEGEGTQEKSDEAPAFIPVADQAAAEYEAELKAKAHKTAVDASDA
VEQNIVEEELAKVEEPVKAEEPVKAEEPVKAEEPVKTEEPVKAEEPVKAEEPVKAEEPVQ
TEEPVKAEEPVKAEEPVKAEEPVKTEEPVKAEEPVKAEEPVKAEESVPAEEVAVEAETAP
VSATETPVEAKEAPVVENKPKAVSQTSSANVNAKTVITAGHASAPMAQPAPVADSETKHT
SVAMAHDKRELIPDSGLRPGSVKPAGRASSAMTKTLSAE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgctaatcaatgcaacgcagcaagaagaaatgcgcgtagcactggttgac
ggccagcgcctatatgatttagatatagaaagcccaggtcacgaacagaaaaaagccaat
atttacaaaggtaaaatcacacgtattgaaccatctttagaagcagcatttgttgattac
ggtgctgatcgtcatggtttccttcctttaaaagaaattgcccgtacttacttcccgcaa
ggttacacctttcatggtcgtccgaatattcgcgacgtgatcaaagaaggccaagaagtt
attgtacaagttgataaagaagagcgcggccaaaaaggggcagcactgactacctttatc
agcgtggcaggtagttatttagtgcttatgcctaacaaccctcgcgctggcggtatttct
cgccgtatcgaaggtgatgagcgaactgaacttaaagagtcgctaagccgcttagaacta
ccaaaaggtatgggcttaattgtacgtaccgcaggtgttggtaagtcgtttgaagaacta
aactacgatttaaaagcattattagtccactgggaagccattcaacaagcggcagacagt
gcaaaagcaccatttttaattcaccaagaaagcaacgtaattttccgtgcaattcgcgat
tatttacgtcgtgacattggcgaaattttaattgataagcctcgtgtttttgaagaagct
aaagcgcacatagagcgttttcgtcctgatttcatgagtcgcgttaagctttatcaaggt
gatacaccgttatttacacattaccaaattgaaagccaaattgagtctgcgttccaacgt
gaagtgcgcttaccttcaggtggttctattgtaattgaccctactgaagcacttacctct
atcgatatcaactcgtctaaagcaacaaaaggcggcgatattgaagaaacagcgcttaac
accaacctagaagcggcagatgaaattgcacgtcaacttcgtttacgtgatttaggtggc
ttaattgttatcgactttattgatatgacacctccacgtcatcaacgtgaagtagaaaac
cgcttaaaagatgctgctcgccctgatcgtgcgcgcgtacaaattggtaaaatttctcgc
tttggcttacttgaaatgtcacgccaacgcctacgcccttcactaggcgaagcaagccaa
ggtgtttgtccacgttgtagtggtcaaggtacaattcgttctaacgaatcaatcgcattg
tctattcttcgtttaattgaagaagaagcgattaaagacaacaccgctcaagttaatgct
caagtgcctgttgctgttgccgcttatttattgaatgagcaacgtcgtagcgttcaccgt
attgaaaagcatcataaatgtgatgtagtgattattcctaatcaacacatggaaacacct
cactacgaagtaatgcgtttacgtaaagatgaaacgcttgaaactgtaagttacgagcaa
gttgttgcgcctgagcctgaagcatttgaaatgtctaaatcgccagcggcacctgttcgt
gaagagccgaagcttaaaggcgtcgttatgccttcaacgcctgctccacaagcggcagca
aaagctgcgccggtagtagaagcaaaagctgaaattggtttatttgccgcattaggtaaa
tggattaagtcgttatttgggtctgatactgagcaaaaatcagaaaaacagactgaaaag
caatcgcaagatcgccctagtaataaccgtggtaatgataatcgtcgtcgtaataacaac
caacgtcgtcgtaataataaccctcgtaataaaccgcgtaacgaacgtactgcagacact
gaagctaaaaatgagtcggcgcctgtaaatgatacgcaagaaaagaatgagaatcgcaat
aagcgccgtcgtaattcaaatacgcgtaaacgtcctgagcataaaactgaagataaaacg
caagtaaaagcagaggcaactcaaaatacggatactgcagttaaatctgataagaatgct
gagccaaaagagcaaaagcctaaggtacgtcgtcaacgtcgtaatttacgtaaaaaagtt
cgcgtacaagacgaaagcacagagcaagttcaaacaactgagcaagctgttgagcaacca
gtggttaaagaagacaagccacaagtgaaagagcaagctcctgttgttgaaaagcaagcg
ccggtatctgatgaaaaagcacctgcacctgctaaaaaacaagctgaggctgtggttgat
gcaaacgataacgtggcaacacaagatgaagagcaagagcaaacacgtacccgctcacgt
cgttcaccgcgtcatcttcgtgcatctggccaacgtcgtcgtcgtcctgaaggtgaaggc
acgcaagagaagtctgatgaagcgcctgctttcattccagttgcggatcaagccgctgct
gaatacgaagcagagctaaaagcaaaagcacataaaacggccgttgatgcctctgatgca
gttgaacaaaacattgttgaagaagaattagcgaaagttgaagagcctgtaaaagctgaa
gaaccagtaaaagctgaagaaccagtaaaagctgaagaaccagtaaaaactgaagaacca
gtgaaagctgaagaaccagtgaaagctgaagaaccagtaaaagctgaagaaccagtgcaa
actgaagaaccagtgaaagctgaagaaccagtgaaagctgaagaaccagtgaaagctgaa
gaaccagtgaaaactgaagaaccagtaaaagctgaagaaccagtaaaagctgaagaacca
gtaaaagctgaagaatcagtaccagctgaagaagttgctgttgaagctgaaacagcaccg
gttagcgctactgaaacacctgtagaagcgaaagaagcacctgtggttgaaaataaacct
aaggcagtttcgcaaacgagttcagctaatgtaaacgctaaaacagtgattacagcagga
catgcaagtgcgccaatggcacagcctgcgcctgtagccgatagcgaaaccaagcataca
tcggttgcaatggcacatgacaaacgtgagttaatccctgacagcggccttcgccctggc
tcggtaaaacctgccggtcgtgcaagctcagcaatgactaaaacgctgagtgctgaataa
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